RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 TP53RKQ96S44 253 aa4.87□□□□□ -1.63
USP54-202ENST00000413442 RBM38Q9H0Z9 239 aaKnown RBP4.87□□□□□ -1.63
USP54-202ENST00000413442 C5orf66Q9H5L9 145 aa4.87□□□□□ -1.63
USP54-202ENST00000413442 ZMAT4Q9H898 229 aa4.87□□□□□ -1.63
USP54-202ENST00000413442 DAZ1Q9NQZ3 744 aaKnown RBP4.87□□□□□ -1.63
USP54-202ENST00000413442 U3KQ87 197 aa4.87□□□□□ -1.63
USP54-202ENST00000413442 A0A0B4J293 547 aa4.86□□□□□ -1.63
USP54-202ENST00000413442 ZNF320A2RRD8 509 aa4.86□□□□□ -1.63
USP54-202ENST00000413442 C2orf70A6NJV1 201 aa4.86□□□□□ -1.63
USP54-202ENST00000413442 FAM90A26D6RGX4 464 aa4.86□□□□□ -1.63
USP54-202ENST00000413442 MED6O75586 246 aa4.86□□□□□ -1.63
USP54-202ENST00000413442 PRH1P02810 166 aa4.86□□□□□ -1.63
USP54-202ENST00000413442 CTSGP08311 255 aa4.86□□□□□ -1.63
USP54-202ENST00000413442 APELAP0DMC3 54 aa4.86□□□□□ -1.63
USP54-202ENST00000413442 AKR1C4P17516 323 aa4.86□□□□□ -1.63
USP54-202ENST00000413442 RPP30P78346 268 aaKnown RBP4.86□□□□□ -1.63
USP54-202ENST00000413442 ZNF57Q68EA5 555 aaPredicted RBP4.86□□□□□ -1.63
USP54-202ENST00000413442 SLC16A13Q7RTY0 426 aa4.86□□□□□ -1.63
USP54-202ENST00000413442 SELENOHQ8IZQ5 122 aaKnown RBP4.86□□□□□ -1.63
USP54-202ENST00000413442 OR10W1Q8NGF6 305 aa4.86□□□□□ -1.63
USP54-202ENST00000413442 OR4D10Q8NGI6 311 aa4.86□□□□□ -1.63
USP54-202ENST00000413442 DYNLRB2Q8TF09 96 aa4.86□□□□□ -1.63
USP54-202ENST00000413442 CCDC140Q96MF4 163 aa4.86□□□□□ -1.63
USP54-202ENST00000413442 GINS3Q9BRX5 216 aa4.86□□□□□ -1.63
USP54-202ENST00000413442 HINT2Q9BX68 163 aa4.86□□□□□ -1.63
USP54-202ENST00000413442 C19orf73Q9NVV2 129 aa4.86□□□□□ -1.63
USP54-202ENST00000413442 MCUBQ9NWR8 336 aa4.86□□□□□ -1.63
USP54-202ENST00000413442 PFDN2Q9UHV9 154 aa4.86□□□□□ -1.63
USP54-202ENST00000413442 TMED3Q9Y3Q3 217 aa4.86□□□□□ -1.63
USP54-202ENST00000413442 A0A1W2PS18 150 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 ZNF785A8K8V0 405 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 I3L2K1 104 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 K7EIM0 57 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 ST8SIA3O43173 380 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 GNG7O60262 68 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 CFDP00746 253 aaPredicted RBP4.85□□□□□ -1.63
USP54-202ENST00000413442 IGKV1-5P01602 117 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 TRBV12-3P01733 135 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 PRB2P02812 416 aaPredicted RBP4.85□□□□□ -1.63
USP54-202ENST00000413442 OR5AC1P0C628 307 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 SULT1A3P0DMM9 295 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 SULT1A4P0DMN0 295 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 PI3P19957 117 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 S100A7P31151 101 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 PPP5CP53041 499 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 AP2S1P53680 142 aaPredicted RBP4.85□□□□□ -1.63
USP54-202ENST00000413442 PAFAH1B2P68402 229 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 KLF9Q13886 244 aaPredicted RBP4.85□□□□□ -1.63
USP54-202ENST00000413442 TMEM187Q14656 261 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 RBMS2Q15434 407 aaKnown RBP4.85□□□□□ -1.63
USP54-202ENST00000413442 BSXQ3C1V8 233 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 SP6Q3SY56 376 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 C2orf83Q53S99 150 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 NMSQ5H8A3 153 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 RBPMS2Q6ZRY4 209 aaKnown RBP4.85□□□□□ -1.63
USP54-202ENST00000413442 Q8N1Y9 231 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 UXS1Q8NBZ7 420 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 OR4X1Q8NH49 305 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 IL17DQ8TAD2 202 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 S100ZQ8WXG8 99 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 CACNG8Q8WXS5 425 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 OR10C1Q96KK4 312 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 WWC2-AS2Q96NR7 200 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 CIB3Q96Q77 187 aaPredicted RBP4.85□□□□□ -1.63
USP54-202ENST00000413442 SPAG8Q99932 426 aaPredicted RBP4.85□□□□□ -1.63
USP54-202ENST00000413442 TMEM231Q9H6L2 316 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 HEYLQ9NQ87 328 aaPredicted RBP4.85□□□□□ -1.63
USP54-202ENST00000413442 NSG2Q9Y328 171 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 U3KQK5 164 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 V9GYH0 126 aa4.85□□□□□ -1.63
USP54-202ENST00000413442 TRAV14DV4A0A0A6YYC5 116 aa4.84□□□□□ -1.63
USP54-202ENST00000413442 TRAV2A0A0B4J234 112 aa4.84□□□□□ -1.63
USP54-202ENST00000413442 TSPAN4O14817 238 aa4.84□□□□□ -1.63
USP54-202ENST00000413442 CLN5O75503 358 aa4.84□□□□□ -1.63
USP54-202ENST00000413442 TMEM50AO95807 157 aa4.84□□□□□ -1.63
USP54-202ENST00000413442 MT-CO2P00403 227 aa4.84□□□□□ -1.63
USP54-202ENST00000413442 REG1AP05451 166 aa4.84□□□□□ -1.63
USP54-202ENST00000413442 FABP1P07148 127 aa4.84□□□□□ -1.63
USP54-202ENST00000413442 GPR183P32249 361 aa4.84□□□□□ -1.63
USP54-202ENST00000413442 GPX4P36969 197 aaPredicted RBP4.84□□□□□ -1.63
USP54-202ENST00000413442 EIF2B2P49770 351 aaKnown RBP4.84□□□□□ -1.63
USP54-202ENST00000413442 YPEL3P61236 119 aaPredicted RBP4.84□□□□□ -1.63
USP54-202ENST00000413442 SMCO1Q147U7 214 aa4.84□□□□□ -1.63
USP54-202ENST00000413442 ZNF79Q15937 498 aa4.84□□□□□ -1.63
USP54-202ENST00000413442 Q56UQ5 140 aa4.84□□□□□ -1.63
USP54-202ENST00000413442 RNASE12Q5GAN4 147 aaKnown RBP4.84□□□□□ -1.63
USP54-202ENST00000413442 TMEM268Q5VZI3 342 aa4.84□□□□□ -1.63
USP54-202ENST00000413442 TRIQKQ629K1 86 aa4.84□□□□□ -1.63
USP54-202ENST00000413442 ZNF600Q6ZNG1 722 aa4.84□□□□□ -1.63
USP54-202ENST00000413442 CENPSQ8N2Z9 138 aa4.84□□□□□ -1.63
USP54-202ENST00000413442 TMEM116Q8NCL8 245 aa4.84□□□□□ -1.63
USP54-202ENST00000413442 TMEM190Q8WZ59 177 aa4.84□□□□□ -1.63
USP54-202ENST00000413442 TRIM63Q969Q1 353 aa4.84□□□□□ -1.63
USP54-202ENST00000413442 GPR146Q96CH1 333 aa4.84□□□□□ -1.63
USP54-202ENST00000413442 NARS2Q96I59 477 aaKnown RBP4.84□□□□□ -1.63
USP54-202ENST00000413442 PRR25Q96S07 402 aa4.84□□□□□ -1.63
USP54-202ENST00000413442 SRRQ9GZT4 340 aa4.84□□□□□ -1.63
USP54-202ENST00000413442 TUBA4BQ9H853 241 aa4.84□□□□□ -1.63
USP54-202ENST00000413442 BATF3Q9NR55 127 aa4.84□□□□□ -1.63
USP54-202ENST00000413442 HSPB7Q9UBY9 170 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms