RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 PDCD10Q9BUL8 212 aa10.91□□□□□ -0.66
NIF3L1-205ENST00000409588 CCDC59Q9P031 241 aaKnown RBP10.91□□□□□ -0.66
NIF3L1-205ENST00000409588 HUWE1Q7Z6Z7 4374 aaKnown RBP10.91□□□□□ -0.66
NIF3L1-205ENST00000409588 DBX1A6NMT0 343 aa10.9□□□□□ -0.66
NIF3L1-205ENST00000409588 I3L2K1 104 aa10.9□□□□□ -0.66
NIF3L1-205ENST00000409588 CTDSP2O14595 271 aa10.9□□□□□ -0.66
NIF3L1-205ENST00000409588 UCP1P25874 307 aa10.9□□□□□ -0.66
NIF3L1-205ENST00000409588 NPBWR1P48145 328 aa10.9□□□□□ -0.66
NIF3L1-205ENST00000409588 AKR1C2P52895 323 aa10.9□□□□□ -0.66
NIF3L1-205ENST00000409588 DHODHQ02127 395 aa10.9□□□□□ -0.66
NIF3L1-205ENST00000409588 SCGB2B2Q4G0G5 96 aa10.9□□□□□ -0.66
NIF3L1-205ENST00000409588 BTNL8Q6UX41 500 aa10.9□□□□□ -0.66
NIF3L1-205ENST00000409588 CLVS1Q8IUQ0 354 aaPredicted RBP10.9□□□□□ -0.66
NIF3L1-205ENST00000409588 SMIM4Q8WVI0 70 aa10.9□□□□□ -0.66
NIF3L1-205ENST00000409588 CACNG8Q8WXS5 425 aa10.9□□□□□ -0.66
NIF3L1-205ENST00000409588 DIRAS2Q96HU8 199 aa10.9□□□□□ -0.66
NIF3L1-205ENST00000409588 SCGB3A2Q96PL1 93 aa10.9□□□□□ -0.66
NIF3L1-205ENST00000409588 PRRT1Q99946 306 aa10.9□□□□□ -0.66
NIF3L1-205ENST00000409588 MIXL1Q9H2W2 232 aa10.9□□□□□ -0.66
NIF3L1-205ENST00000409588 HIPK2Q9H2X6 1198 aa10.9□□□□□ -0.66
NIF3L1-205ENST00000409588 SRD5A3Q9H8P0 318 aa10.9□□□□□ -0.66
NIF3L1-205ENST00000409588 RSL24D1Q9UHA3 163 aaKnown RBP10.9□□□□□ -0.66
NIF3L1-205ENST00000409588 C14orf166Q9Y224 244 aaKnown RBP10.9□□□□□ -0.66
NIF3L1-205ENST00000409588 A0A0B4J293 547 aa10.89□□□□□ -0.67
NIF3L1-205ENST00000409588 PIGBOS1A0A0B4J2F0 54 aa10.89□□□□□ -0.67
NIF3L1-205ENST00000409588 RBMY1BA6NDE4 496 aaKnown RBP10.89□□□□□ -0.67
NIF3L1-205ENST00000409588 RBMY1EA6NEQ0 496 aaKnown RBP10.89□□□□□ -0.67
NIF3L1-205ENST00000409588 F8W735 103 aaPredicted RBP10.89□□□□□ -0.67
NIF3L1-205ENST00000409588 NOL3O60936 208 aaKnown RBP10.89□□□□□ -0.67
NIF3L1-205ENST00000409588 CDS2O95674 445 aa10.89□□□□□ -0.67
NIF3L1-205ENST00000409588 IFNA17P01571 189 aa10.89□□□□□ -0.67
NIF3L1-205ENST00000409588 RBMY1DP0C7P1 496 aaKnown RBP10.89□□□□□ -0.67
NIF3L1-205ENST00000409588 P0C879 139 aa10.89□□□□□ -0.67
NIF3L1-205ENST00000409588 AKAIN1P0CW23 69 aa10.89□□□□□ -0.67
NIF3L1-205ENST00000409588 BMI1P35226 326 aa10.89□□□□□ -0.67
NIF3L1-205ENST00000409588 SPCS2Q15005 226 aa10.89□□□□□ -0.67
NIF3L1-205ENST00000409588 TRIM16LQ309B1 348 aa10.89□□□□□ -0.67
NIF3L1-205ENST00000409588 UBAC2Q8NBM4 344 aa10.89□□□□□ -0.67
NIF3L1-205ENST00000409588 DUSP18Q8NEJ0 188 aa10.89□□□□□ -0.67
NIF3L1-205ENST00000409588 OR52E5Q8NH55 327 aa10.89□□□□□ -0.67
NIF3L1-205ENST00000409588 DYNC2LI1Q8TCX1 351 aa10.89□□□□□ -0.67
NIF3L1-205ENST00000409588 OR10C1Q96KK4 312 aa10.89□□□□□ -0.67
NIF3L1-205ENST00000409588 TP53RKQ96S44 253 aa10.89□□□□□ -0.67
NIF3L1-205ENST00000409588 CHRDL1Q9BU40 450 aa10.89□□□□□ -0.67
NIF3L1-205ENST00000409588 LOC102724200A0A096LPH7 203 aaPredicted RBP10.88□□□□□ -0.67
NIF3L1-205ENST00000409588 IGHV3-35A0A0C4DH35 117 aa10.88□□□□□ -0.67
NIF3L1-205ENST00000409588 GSTZ1O43708 216 aaPredicted RBP10.88□□□□□ -0.67
NIF3L1-205ENST00000409588 SCGB2A1O75556 95 aa10.88□□□□□ -0.67
NIF3L1-205ENST00000409588 SCAF4O95104 1147 aaKnown RBP10.88□□□□□ -0.67
NIF3L1-205ENST00000409588 IGKV1-5P01602 117 aa10.88□□□□□ -0.67
NIF3L1-205ENST00000409588 PI3P19957 117 aa10.88□□□□□ -0.67
NIF3L1-205ENST00000409588 EDN2P20800 178 aa10.88□□□□□ -0.67
NIF3L1-205ENST00000409588 ADMP35318 185 aa10.88□□□□□ -0.67
NIF3L1-205ENST00000409588 IL18Q14116 193 aa10.88□□□□□ -0.67
NIF3L1-205ENST00000409588 RNASE12Q5GAN4 147 aaKnown RBP10.88□□□□□ -0.67
NIF3L1-205ENST00000409588 PVRIGQ6DKI7 326 aa10.88□□□□□ -0.67
NIF3L1-205ENST00000409588 SLC35G3Q8N808 338 aa10.88□□□□□ -0.67
NIF3L1-205ENST00000409588 OR13C8Q8NGS7 320 aa10.88□□□□□ -0.67
NIF3L1-205ENST00000409588 MARCH1Q8TCQ1 289 aa10.88□□□□□ -0.67
NIF3L1-205ENST00000409588 MISP3Q96FF7 219 aa10.88□□□□□ -0.67
NIF3L1-205ENST00000409588 C20orf24Q9BUV8 137 aa10.88□□□□□ -0.67
NIF3L1-205ENST00000409588 NXF2Q9GZY0 626 aaKnown RBP10.88□□□□□ -0.67
NIF3L1-205ENST00000409588 TMEM222Q9H0R3 208 aa10.88□□□□□ -0.67
NIF3L1-205ENST00000409588 ENY2Q9NPA8 101 aa10.88□□□□□ -0.67
NIF3L1-205ENST00000409588 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.88□□□□□ -0.67
NIF3L1-205ENST00000409588 SMPXQ9UHP9 88 aa10.88□□□□□ -0.67
NIF3L1-205ENST00000409588 KCNIP3Q9Y2W7 256 aa10.88□□□□□ -0.67
NIF3L1-205ENST00000409588 TRAV14DV4A0A0A6YYC5 116 aa10.87□□□□□ -0.67
NIF3L1-205ENST00000409588 TEX13DA0A0J9YY54 714 aaPredicted RBP10.87□□□□□ -0.67
NIF3L1-205ENST00000409588 OR4C46A6NHA9 309 aa10.87□□□□□ -0.67
NIF3L1-205ENST00000409588 GNG7O60262 68 aa10.87□□□□□ -0.67
NIF3L1-205ENST00000409588 MT-CO2P00403 227 aa10.87□□□□□ -0.67
NIF3L1-205ENST00000409588 PPP5CP53041 499 aa10.87□□□□□ -0.67
NIF3L1-205ENST00000409588 AARDQ4LEZ3 155 aa10.87□□□□□ -0.67
NIF3L1-205ENST00000409588 OR4D10Q8NGI6 311 aa10.87□□□□□ -0.67
NIF3L1-205ENST00000409588 GINS3Q9BRX5 216 aa10.87□□□□□ -0.67
NIF3L1-205ENST00000409588 RTBDNQ9BSG5 229 aaPredicted RBP10.87□□□□□ -0.67
NIF3L1-205ENST00000409588 GGTLC1Q9BX51 225 aa10.87□□□□□ -0.67
NIF3L1-205ENST00000409588 SCP2D1Q9UJQ7 156 aa10.87□□□□□ -0.67
NIF3L1-205ENST00000409588 GPR132Q9UNW8 380 aa10.87□□□□□ -0.67
NIF3L1-205ENST00000409588 IGHV3-21A0A0B4J1V1 117 aa10.86□□□□□ -0.67
NIF3L1-205ENST00000409588 UBE2CO00762 179 aa10.86□□□□□ -0.67
NIF3L1-205ENST00000409588 ST8SIA3O43173 380 aa10.86□□□□□ -0.67
NIF3L1-205ENST00000409588 SPCS3P61009 180 aa10.86□□□□□ -0.67
NIF3L1-205ENST00000409588 TMEM116Q8NCL8 245 aa10.86□□□□□ -0.67
NIF3L1-205ENST00000409588 RNASE11Q8TAA1 199 aaKnown RBP10.86□□□□□ -0.67
NIF3L1-205ENST00000409588 GLYATL2Q8WU03 294 aa10.86□□□□□ -0.67
NIF3L1-205ENST00000409588 RBPMSQ93062 196 aaKnown RBP10.86□□□□□ -0.67
NIF3L1-205ENST00000409588 IGHV7-4-1A0A0J9YVY3 117 aa10.85□□□□□ -0.67
NIF3L1-205ENST00000409588 ANKRD20A5PA0PJZ0 165 aa10.85□□□□□ -0.67
NIF3L1-205ENST00000409588 FABP12A6NFH5 140 aa10.85□□□□□ -0.67
NIF3L1-205ENST00000409588 YIF1AO95070 293 aa10.85□□□□□ -0.67
NIF3L1-205ENST00000409588 APOC4P55056 127 aa10.85□□□□□ -0.67
NIF3L1-205ENST00000409588 PAFAH1B2P68402 229 aa10.85□□□□□ -0.67
NIF3L1-205ENST00000409588 SP6Q3SY56 376 aa10.85□□□□□ -0.67
NIF3L1-205ENST00000409588 Q6ZWC4 215 aa10.85□□□□□ -0.67
NIF3L1-205ENST00000409588 NOXA1Q86UR1 476 aa10.85□□□□□ -0.67
NIF3L1-205ENST00000409588 DEDD2Q8WXF8 326 aa10.85□□□□□ -0.67
NIF3L1-205ENST00000409588 IL22RA2Q969J5 263 aa10.85□□□□□ -0.67
NIF3L1-205ENST00000409588 PINX1Q96BK5 328 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms