RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 TXN2Q99757 166 aa11.95□□□□□ -0.5
CHMP3-203ENST00000409225 CCDC90BQ9GZT6 254 aa11.95□□□□□ -0.5
CHMP3-203ENST00000409225 DNAH5Q8TE73 4624 aa11.94□□□□□ -0.5
CHMP3-203ENST00000409225 TRAV1-2A0A0B4J238 106 aa11.94□□□□□ -0.5
CHMP3-203ENST00000409225 SMIM30A4D0T7 59 aa11.94□□□□□ -0.5
CHMP3-203ENST00000409225 GNG7O60262 68 aa11.94□□□□□ -0.5
CHMP3-203ENST00000409225 MT-CO2P00403 227 aa11.94□□□□□ -0.5
CHMP3-203ENST00000409225 ZNF688P0C7X2 276 aa11.94□□□□□ -0.5
CHMP3-203ENST00000409225 MYL9P24844 172 aa11.94□□□□□ -0.5
CHMP3-203ENST00000409225 RCN1Q15293 331 aa11.94□□□□□ -0.5
CHMP3-203ENST00000409225 ACTL10Q5JWF8 245 aa11.94□□□□□ -0.5
CHMP3-203ENST00000409225 DMRTA1Q5VZB9 504 aa11.94□□□□□ -0.5
CHMP3-203ENST00000409225 Q8N1X5 172 aa11.94□□□□□ -0.5
CHMP3-203ENST00000409225 BEST4Q8NFU0 473 aa11.94□□□□□ -0.5
CHMP3-203ENST00000409225 TMEM56Q96MV1 263 aa11.94□□□□□ -0.5
CHMP3-203ENST00000409225 CASQ2O14958 399 aaPredicted RBP11.93□□□□□ -0.5
CHMP3-203ENST00000409225 SNAPC5O75971 98 aa11.93□□□□□ -0.5
CHMP3-203ENST00000409225 TNP2Q05952 138 aa11.93□□□□□ -0.5
CHMP3-203ENST00000409225 TMEM17Q86X19 198 aa11.93□□□□□ -0.5
CHMP3-203ENST00000409225 MGLLQ99685 303 aa11.93□□□□□ -0.5
CHMP3-203ENST00000409225 PUS1Q9Y606 427 aaKnown RBP eCLIP11.93□□□□□ -0.5
CHMP3-203ENST00000409225 K7EQG2 157 aa11.92□□□□□ -0.5
CHMP3-203ENST00000409225 KRASP01116 189 aa11.92□□□□□ -0.5
CHMP3-203ENST00000409225 G6PCP35575 357 aa11.92□□□□□ -0.5
CHMP3-203ENST00000409225 PINX1Q96BK5 328 aaKnown RBP11.92□□□□□ -0.5
CHMP3-203ENST00000409225 GRAMD2BQ96HH9 432 aa11.92□□□□□ -0.5
CHMP3-203ENST00000409225 TMEM231Q9H6L2 316 aa11.92□□□□□ -0.5
CHMP3-203ENST00000409225 ZFAND3Q9H8U3 227 aa11.92□□□□□ -0.5
CHMP3-203ENST00000409225 SCRT2Q9NQ03 307 aa11.92□□□□□ -0.5
CHMP3-203ENST00000409225 DBX1A6NMT0 343 aa11.91□□□□□ -0.5
CHMP3-203ENST00000409225 RGS10O43665 173 aa11.91□□□□□ -0.5
CHMP3-203ENST00000409225 FCER2P06734 321 aa11.91□□□□□ -0.5
CHMP3-203ENST00000409225 LPAR6P43657 344 aa11.91□□□□□ -0.5
CHMP3-203ENST00000409225 MOB3AQ96BX8 217 aa11.91□□□□□ -0.5
CHMP3-203ENST00000409225 PRNDQ9UKY0 176 aa11.91□□□□□ -0.5
CHMP3-203ENST00000409225 RLN1P04808 185 aa11.9□□□□□ -0.5
CHMP3-203ENST00000409225 EMP1P54849 157 aa11.9□□□□□ -0.5
CHMP3-203ENST00000409225 RNF212Q495C1 297 aa11.9□□□□□ -0.5
CHMP3-203ENST00000409225 ZNF600Q6ZNG1 722 aa11.9□□□□□ -0.5
CHMP3-203ENST00000409225 TPRA1Q86W33 373 aa11.9□□□□□ -0.5
CHMP3-203ENST00000409225 XCL2Q9UBD3 114 aa11.9□□□□□ -0.5
CHMP3-203ENST00000409225 TPRKBQ9Y3C4 175 aa11.9□□□□□ -0.5
CHMP3-203ENST00000409225 A0A1B0GU03 582 aa11.89□□□□□ -0.51
CHMP3-203ENST00000409225 SCGNO76038 276 aa11.89□□□□□ -0.51
CHMP3-203ENST00000409225 SPART-AS1P0CW21 52 aa11.89□□□□□ -0.51
CHMP3-203ENST00000409225 NPPCP23582 126 aa11.89□□□□□ -0.51
CHMP3-203ENST00000409225 F2RP25116 425 aa11.89□□□□□ -0.51
CHMP3-203ENST00000409225 HOGA1Q86XE5 327 aa11.89□□□□□ -0.51
CHMP3-203ENST00000409225 TSPAN14Q8NG11 270 aa11.89□□□□□ -0.51
CHMP3-203ENST00000409225 FCAMRQ8WWV6 532 aa11.89□□□□□ -0.51
CHMP3-203ENST00000409225 FAM210BQ96KR6 192 aa11.89□□□□□ -0.51
CHMP3-203ENST00000409225 FKBP11Q9NYL4 201 aa11.89□□□□□ -0.51
CHMP3-203ENST00000409225 NACAE9PAV3 2078 aa11.88□□□□□ -0.51
CHMP3-203ENST00000409225 HTN3P15516 51 aa11.88□□□□□ -0.51
CHMP3-203ENST00000409225 GNRHRP30968 328 aa11.88□□□□□ -0.51
CHMP3-203ENST00000409225 HERV-K104P61576 105 aa11.88□□□□□ -0.51
CHMP3-203ENST00000409225 OGFRL1Q5TC84 451 aaPredicted RBP11.88□□□□□ -0.51
CHMP3-203ENST00000409225 C22orf42Q6IC83 251 aa11.88□□□□□ -0.51
CHMP3-203ENST00000409225 DCANP1Q8TF63 244 aa11.88□□□□□ -0.51
CHMP3-203ENST00000409225 RAB40CQ96S21 281 aa11.88□□□□□ -0.51
CHMP3-203ENST00000409225 DUSP21Q9H596 190 aa11.88□□□□□ -0.51
CHMP3-203ENST00000409225 A0A1W2PS18 150 aa11.87□□□□□ -0.51
CHMP3-203ENST00000409225 P2RY1P47900 373 aa11.87□□□□□ -0.51
CHMP3-203ENST00000409225 NPBWR1P48145 328 aa11.87□□□□□ -0.51
CHMP3-203ENST00000409225 PSMG4Q5JS54 123 aa11.87□□□□□ -0.51
CHMP3-203ENST00000409225 ZNF114Q8NC26 417 aa11.87□□□□□ -0.51
CHMP3-203ENST00000409225 C1QTNF4Q9BXJ3 329 aa11.87□□□□□ -0.51
CHMP3-203ENST00000409225 PGLYRP1O75594 196 aaPredicted RBP11.86□□□□□ -0.51
CHMP3-203ENST00000409225 PPP5CP53041 499 aa11.86□□□□□ -0.51
CHMP3-203ENST00000409225 NUTF2P61970 127 aaKnown RBP11.86□□□□□ -0.51
CHMP3-203ENST00000409225 DHRS2Q13268 280 aa11.86□□□□□ -0.51
CHMP3-203ENST00000409225 CADM3Q8N126 398 aa11.86□□□□□ -0.51
CHMP3-203ENST00000409225 LGALS14Q8TCE9 139 aa11.86□□□□□ -0.51
CHMP3-203ENST00000409225 METTL26Q96S19 204 aa11.86□□□□□ -0.51
CHMP3-203ENST00000409225 TSC22D3Q99576 134 aa11.86□□□□□ -0.51
CHMP3-203ENST00000409225 TRAV18A0A075B6X5 111 aa11.85□□□□□ -0.51
CHMP3-203ENST00000409225 TRDV1A0A1B0GX56 115 aa11.85□□□□□ -0.51
CHMP3-203ENST00000409225 NOTOA8MTQ0 251 aa11.85□□□□□ -0.51
CHMP3-203ENST00000409225 ZNF367Q7RTV3 350 aa11.85□□□□□ -0.51
CHMP3-203ENST00000409225 PRSS48Q7RTY5 328 aa11.85□□□□□ -0.51
CHMP3-203ENST00000409225 BORCS5Q969J3 196 aa11.85□□□□□ -0.51
CHMP3-203ENST00000409225 RHBDL2Q9NX52 303 aa11.85□□□□□ -0.51
CHMP3-203ENST00000409225 DAPK2Q9UIK4 370 aa11.85□□□□□ -0.51
CHMP3-203ENST00000409225 TMEM189A5PLL7 270 aa11.84□□□□□ -0.51
CHMP3-203ENST00000409225 HELTA6NFD8 242 aa11.84□□□□□ -0.51
CHMP3-203ENST00000409225 TMEM50AO95807 157 aa11.84□□□□□ -0.51
CHMP3-203ENST00000409225 CRYBB3P26998 211 aa11.84□□□□□ -0.51
CHMP3-203ENST00000409225 FGF9P31371 208 aaPredicted RBP11.84□□□□□ -0.51
CHMP3-203ENST00000409225 PRCDQ00LT1 54 aa11.84□□□□□ -0.51
CHMP3-203ENST00000409225 OR5AP2Q8NGF4 316 aa11.84□□□□□ -0.51
CHMP3-203ENST00000409225 OR4A16Q8NH70 328 aa11.84□□□□□ -0.51
CHMP3-203ENST00000409225 NARS2Q96I59 477 aaKnown RBP11.84□□□□□ -0.51
CHMP3-203ENST00000409225 RNF167Q9H6Y7 350 aa11.84□□□□□ -0.51
CHMP3-203ENST00000409225 NDUFB11Q9NX14 153 aa11.84□□□□□ -0.51
CHMP3-203ENST00000409225 TMED3Q9Y3Q3 217 aa11.84□□□□□ -0.51
CHMP3-203ENST00000409225 IGHV3OR16-12A0A075B7B8 117 aa11.83□□□□□ -0.52
CHMP3-203ENST00000409225 MEIS3P1A6NDR6 274 aa11.83□□□□□ -0.52
CHMP3-203ENST00000409225 ERHP84090 104 aaKnown RBP11.83□□□□□ -0.52
CHMP3-203ENST00000409225 SPINK9Q5DT21 86 aa11.83□□□□□ -0.52
CHMP3-203ENST00000409225 FAM222AQ5U5X8 452 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms