RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 FMC1Q96HJ9 113 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 TMEM191AQ9H0A3 160 aa4.14□□□□□ -1.75
SCN3A-203ENST00000409101 A0A087WV48 116 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 K7EM74 188 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 HOXA3O43365 443 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-203ENST00000409101 NBEAP1P0C6P0 100 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 CRYBB3P26998 211 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 SRSF9Q13242 221 aaKnown RBP eCLIP4.13□□□□□ -1.75
SCN3A-203ENST00000409101 ZNF79Q15937 498 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 C5orf64Q2M2E5 130 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 CLLU1Q5K131 121 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 ANGPTL6Q8NI99 470 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 C2orf88Q9BSF0 95 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 PRO3102Q9H379 93 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 FAM215AQ9Y5M1 114 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 PLXNA3P51805 1871 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 FBLL1A6NHQ2 334 aaKnown RBP4.13□□□□□ -1.75
SCN3A-203ENST00000409101 EREGO14944 169 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 SUMO2P61956 95 aaKnown RBP4.13□□□□□ -1.75
SCN3A-203ENST00000409101 ELOBQ15370 118 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 TMEM42Q69YG0 159 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 Q8TCH9 128 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 FBLIM1Q8WUP2 373 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 SELENOKQ9Y6D0 94 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 FAM90A9PA6NNJ1 464 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 RBFOX2O43251 390 aaKnown RBP eCLIP4.13□□□□□ -1.75
SCN3A-203ENST00000409101 CCKARP32238 428 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 ZNF362Q5T0B9 420 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-203ENST00000409101 CD200R1LQ6Q8B3 271 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 DHRS11Q6UWP2 260 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 TOMM20LQ6UXN7 152 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 BEND2Q8NDZ0 799 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 NPCDR1Q9BY65 106 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 OTORQ9NRC9 128 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 FAM74A7A6NL05 159 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 LGALS3P17931 250 aaKnown RBP4.13□□□□□ -1.75
SCN3A-203ENST00000409101 APOC4P55056 127 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 PRCDQ00LT1 54 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 DEFA6Q01524 100 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 ACTL10Q5JWF8 245 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 OR11H7Q8NGC8 314 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 MRAP2Q96G30 205 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 RLFQ13129 1914 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 C5orf52A6NGY3 159 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 HSPB1P04792 205 aaKnown RBP4.13□□□□□ -1.75
SCN3A-203ENST00000409101 WT1P19544 449 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-203ENST00000409101 CIRBPQ14011 172 aaKnown RBP4.13□□□□□ -1.75
SCN3A-203ENST00000409101 CYB561D1Q8N8Q1 229 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 WFDC12Q8WWY7 111 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 Q9H3A6 140 aa4.13□□□□□ -1.75
SCN3A-203ENST00000409101 URB1O60287 2271 aaKnown RBP4.13□□□□□ -1.75
SCN3A-203ENST00000409101 DUTP33316 252 aaKnown RBP4.12□□□□□ -1.75
SCN3A-203ENST00000409101 ZNF324BQ6AW86 544 aaPredicted RBP4.12□□□□□ -1.75
SCN3A-203ENST00000409101 FAM71F2Q6NXP2 309 aa4.12□□□□□ -1.75
SCN3A-203ENST00000409101 RAB24Q969Q5 203 aa4.12□□□□□ -1.75
SCN3A-203ENST00000409101 MRPS16Q9Y3D3 137 aaKnown RBP4.12□□□□□ -1.75
SCN3A-203ENST00000409101 MYOFQ9NZM1 2061 aa4.12□□□□□ -1.75
SCN3A-203ENST00000409101 TRAV21A0A0B4J279 112 aa4.12□□□□□ -1.75
SCN3A-203ENST00000409101 H0YJW9 148 aa4.12□□□□□ -1.75
SCN3A-203ENST00000409101 H3BQ15 152 aa4.12□□□□□ -1.75
SCN3A-203ENST00000409101 INSP01308 110 aa4.12□□□□□ -1.75
SCN3A-203ENST00000409101 HNRNPA3P51991 378 aaKnown RBP4.12□□□□□ -1.75
SCN3A-203ENST00000409101 MUC21Q5SSG8 566 aa4.12□□□□□ -1.75
SCN3A-203ENST00000409101 TRBV20OR9-2A0A075B6H5 130 aa4.12□□□□□ -1.75
SCN3A-203ENST00000409101 IGKV1D-17A0A075B6S4 117 aa4.12□□□□□ -1.75
SCN3A-203ENST00000409101 OR1P1Q8NH06 330 aa4.12□□□□□ -1.75
SCN3A-203ENST00000409101 ZFP30Q9Y2G7 519 aa4.12□□□□□ -1.75
SCN3A-203ENST00000409101 IGKV1-9A0A0C4DH69 117 aa4.12□□□□□ -1.75
SCN3A-203ENST00000409101 CXCL3P19876 107 aa4.12□□□□□ -1.75
SCN3A-203ENST00000409101 TFF3Q07654 80 aa4.12□□□□□ -1.75
SCN3A-203ENST00000409101 ZNF880Q6PDB4 577 aa4.12□□□□□ -1.75
SCN3A-203ENST00000409101 KIR3DL3Q8N743 410 aa4.12□□□□□ -1.75
SCN3A-203ENST00000409101 PLA2G10O15496 165 aa4.12□□□□□ -1.75
SCN3A-203ENST00000409101 UCP1P25874 307 aa4.12□□□□□ -1.75
SCN3A-203ENST00000409101 SYNJ2BPP57105 145 aa4.12□□□□□ -1.75
SCN3A-203ENST00000409101 IGFL2Q6UWQ7 119 aa4.12□□□□□ -1.75
SCN3A-203ENST00000409101 MRAPQ8TCY5 172 aa4.12□□□□□ -1.75
SCN3A-203ENST00000409101 NPDC1Q9NQX5 325 aaPredicted RBP4.12□□□□□ -1.75
SCN3A-203ENST00000409101 ZNF319Q9P2F9 582 aa4.12□□□□□ -1.75
SCN3A-203ENST00000409101 RAMP3O60896 148 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 ZNF688P0C7X2 276 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 HINT1P49773 126 aaPredicted RBP4.11□□□□□ -1.75
SCN3A-203ENST00000409101 FOXL1Q12952 345 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 RAB37Q96AX2 223 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 TBX15Q96SF7 602 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 CXorf65A6NEN9 183 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 H3BRM9 83 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 NAT1P18440 290 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 AWAT1Q58HT5 328 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 ZNF383Q8NA42 475 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 RCHY1Q96PM5 261 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 PLXNA4Q9HCM2 1894 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 CROCCQ5TZA2 2017 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 A0A1B0GUS0 222 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 C7orf66A4D0T2 115 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 FOSL1P15407 271 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 FXYD7P58549 80 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 ADORA2A-AS1P86434 159 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 PMS2P11Q13670 270 aa4.11□□□□□ -1.75
SCN3A-203ENST00000409101 FOXL2NBQ6ZUU3 175 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms