RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 CMBLQ96DG6 245 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 SPACA5Q96QH8 159 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 PRRT1Q99946 306 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 SAMD10Q9BYL1 202 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 LPAR5Q9H1C0 372 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 ZNF355PQ9NSJ1 428 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 TMEM38BQ9NVV0 291 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 OPN4Q9UHM6 478 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 SLC7A11Q9UPY5 501 aa3.05□□□□□ -1.92
HMGB3P18-201ENST00000406327 A0A1W2PNU3 283 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 LINC00862A6NCI5 91 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 OR6C6A6NF89 314 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 RFPL4AA6NLU0 287 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 C21orf140B9A014 251 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 F5H5P2 479 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 RFPL4AL1F8VTS6 287 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 M0R135 149 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 M0R233 179 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 BET1O15155 118 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 SOCS1O15524 211 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 SGCEO43556 437 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 CRTAPO75718 401 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 DHRS3O75911 302 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 SIX6O95475 246 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 CFDP00746 253 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 PMP2P02689 132 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 IFNA6P05013 189 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 CSN2P05814 226 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 ZNF35P13682 527 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 HIST1H1DP16402 221 aaKnown RBP3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 HLA-GP17693 338 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 LOXP28300 417 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 CBX5P45973 191 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 PCBD1P61457 104 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 SYCNQ0VAF6 134 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 KISS1Q15726 138 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 GRK1Q15835 563 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 CEACAM16Q2WEN9 425 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 LCE3CQ5T5A8 94 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 DRAM2Q6UX65 266 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 TMED4Q7Z7H5 227 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 ZDHHC22Q8N966 263 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 OR4K15Q8NH41 348 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 TERB2Q8NHR7 220 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 TNFAIP8L1Q8WVP5 186 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 PP6455Q8WZ26 134 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 CPNE4Q96A23 557 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 FAM19A4Q96LR4 140 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 ZNF488Q96MN9 340 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 GPER1Q99527 375 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 CHST5Q9GZS9 411 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 CST11Q9H112 138 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 BANF2Q9H503 90 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 IFT46Q9NQC8 304 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 SDHAF2Q9NX18 166 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 ZNF391Q9UJN7 358 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 ANAPC10Q9UM13 185 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 BOKQ9UMX3 212 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 MYO10Q9HD67 2058 aa3.04□□□□□ -1.92
HMGB3P18-201ENST00000406327 TRAV14DV4A0A0A6YYC5 116 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 C9orf170A2RU37 121 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 OR2AT4A6NND4 320 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 CEACAM18A8MTB9 384 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 LEUTXA8MZ59 168 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 NDUFC2-KCTD14E9PQ53 114 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 RPL36A-HNRNPH2H7BZ11 118 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 MFNGO00587 321 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 TCAPO15273 167 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 ARPC5O15511 151 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 SNAI2O43623 268 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 MRPL33O75394 65 aaKnown RBP3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 NRASP01111 189 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 CD8AP01732 235 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 HLA-AP01891 365 aaKnown RBP3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 HLA-DQA1P01909 254 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 ZNF806P0C7X5 589 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 ZNF32P17041 273 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 CD34P28906 385 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 AGTR1P30556 359 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 S100A11P31949 105 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 PSMB2P49721 201 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 RAB14P61106 215 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 PSG4Q00888 419 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 DHRS2Q13268 280 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 PPP1R1AQ13522 171 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 SCGB2B2Q4G0G5 96 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 ACTBL2Q562R1 376 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 CLLU1Q5K131 121 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 TMEM42Q69YG0 159 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 LPCAT3Q6P1A2 487 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 IGFL2Q6UWQ7 119 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 NTM-AS1Q6ZSK4 140 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 LYG2Q86SG7 212 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 OR2M7Q8NG81 312 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 OR51T1Q8NGJ9 327 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 OR10K1Q8NGX5 313 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 CPNE2Q96FN4 548 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 REEP6Q96HR9 211 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 ARHGAP5-AS1Q96IT6 56 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 IP6K3Q96PC2 410 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms