RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 M0R381 172 aa4.59□□□□□ -1.68
VPS13C-204ENST00000395898 IGKV3-20P01619 116 aa4.59□□□□□ -1.68
VPS13C-204ENST00000395898 RTBDNQ9BSG5 229 aaPredicted RBP4.59□□□□□ -1.68
VPS13C-204ENST00000395898 A1L4Q6 167 aa4.59□□□□□ -1.68
VPS13C-204ENST00000395898 ASCL2Q99929 193 aa4.59□□□□□ -1.68
VPS13C-204ENST00000395898 SLC50A1Q9BRV3 221 aa4.59□□□□□ -1.68
VPS13C-204ENST00000395898 TRBV6-7A0A0A0MS04 114 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 MSGN1A6NI15 193 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 FABP5P3A8MUU1 101 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 HIGD1CA8MV81 97 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 PROB1E7EW31 1015 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 E9PLN8 166 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 C19orf48Q6RUI8 117 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 VKORC1Q9BQB6 163 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 RAMP1O60894 148 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 STHQ8IWL8 128 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 FER1L6-AS1Q8NA97 138 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 SDHCQ99643 169 aaPredicted RBP4.58□□□□□ -1.68
VPS13C-204ENST00000395898 MRPL16Q9NX20 251 aaKnown RBP4.58□□□□□ -1.68
VPS13C-204ENST00000395898 PLXNA2O75051 1894 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 EFNB1P98172 346 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 PVRIGQ6DKI7 326 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 GTSCR1Q86UQ5 136 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 ITLN2Q8WWU7 325 aaPredicted RBP4.58□□□□□ -1.68
VPS13C-204ENST00000395898 SRCAPQ6ZRS2 3230 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 IGKV1D-43A0A0B4J1Z2 117 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 Q9H3A6 140 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 C9JCJ5 164 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 RRHO14718 337 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 UMODP07911 640 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 MDKP21741 143 aaPredicted RBP4.58□□□□□ -1.68
VPS13C-204ENST00000395898 KIAA1644Q3SXP7 199 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 EP300Q09472 2414 aaPredicted RBP4.58□□□□□ -1.68
VPS13C-204ENST00000395898 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.58□□□□□ -1.68
VPS13C-204ENST00000395898 NAT1P18440 290 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 CBLN1P23435 193 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 LDLRAD2Q5SZI1 272 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 CLEC19AQ6UXS0 136 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 RBMY1BA6NDE4 496 aaKnown RBP4.58□□□□□ -1.68
VPS13C-204ENST00000395898 RBMY1EA6NEQ0 496 aaKnown RBP4.58□□□□□ -1.68
VPS13C-204ENST00000395898 ZNHIT1O43257 154 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 CELA3AP09093 270 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 RBMY1DP0C7P1 496 aaKnown RBP4.58□□□□□ -1.68
VPS13C-204ENST00000395898 RBMY1A1P0DJD3 496 aaKnown RBP4.58□□□□□ -1.68
VPS13C-204ENST00000395898 RBMY1CP0DJD4 496 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 CCL1P22362 96 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 IMMP2LQ96T52 175 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 PRSS22Q9GZN4 317 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 WNT10AQ9GZT5 417 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 CARHSP1Q9Y2V2 147 aaKnown RBP4.58□□□□□ -1.68
VPS13C-204ENST00000395898 DTX2Q86UW9 622 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 ZNF418Q8TF45 676 aaPredicted RBP4.58□□□□□ -1.68
VPS13C-204ENST00000395898 WBP1Q96G27 269 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 TMEM133Q9H2Q1 129 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 FBLN5Q9UBX5 448 aa4.58□□□□□ -1.68
VPS13C-204ENST00000395898 F2Z2F3 143 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 FHITP49789 147 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 SCGB3A1Q96QR1 104 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 LTBRP36941 435 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 OR13C6PQ8NH95 151 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 RPP21Q9H633 154 aaKnown RBP4.57□□□□□ -1.68
VPS13C-204ENST00000395898 C17orf98A8MV24 154 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 CSRP1P21291 193 aaKnown RBP4.57□□□□□ -1.68
VPS13C-204ENST00000395898 CNTFRP26992 372 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 OR13A1Q8NGR1 328 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 TMEM167AQ8TBQ9 72 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 SCO2A0A1W2PP80 73 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 GRIFINA4D1Z8 144 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 EIF3GO75821 320 aaKnown RBP eCLIP4.57□□□□□ -1.68
VPS13C-204ENST00000395898 TGFAP01135 160 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 WFIKKN1Q96NZ8 548 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 PARD6GQ9BYG4 376 aaPredicted RBP4.57□□□□□ -1.68
VPS13C-204ENST00000395898 OTORQ9NRC9 128 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 CCL20P78556 96 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 C18orf12Q96KH6 178 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 ARFGEF3Q5TH69 2177 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 PCNX2A6NKB5 2137 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 TRGV2A0A075B6R0 118 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 SAA2-SAA4A0A096LPE2 208 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 TCRBV4S1A1TA0A5B7 111 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 IZUMO1RA6ND01 250 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 CD5P06127 495 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 SAA2P0DJI9 122 aaPredicted RBP4.57□□□□□ -1.68
VPS13C-204ENST00000395898 CFHR1Q03591 330 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 ZFP36L1Q07352 338 aaKnown RBP4.57□□□□□ -1.68
VPS13C-204ENST00000395898 TRAV21A0A0B4J279 112 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 A0A1B0GTI1 187 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 SLC25A20O43772 301 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 IL18BPO95998 194 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 APOHP02749 345 aaPredicted RBP4.57□□□□□ -1.68
VPS13C-204ENST00000395898 MALP21145 153 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 TIMP3P35625 211 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 DSCR9P59020 149 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 DENND4CQ5VZ89 1909 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 SHANK1Q9Y566 2161 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 TRAV8-6A0A0B4J262 113 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 IGHV3-35A0A0C4DH35 117 aa4.57□□□□□ -1.68
VPS13C-204ENST00000395898 DUSP14O95147 198 aaKnown RBP4.57□□□□□ -1.68
VPS13C-204ENST00000395898 SAA1P0DJI8 122 aaPredicted RBP4.57□□□□□ -1.68
VPS13C-204ENST00000395898 IFI27P40305 119 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms