RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 FAM120AOSQ5T036 256 aa12.08□□□□□ -0.48
SCAF11-204ENST00000395454 TPTE2P1Q5T6R2 138 aa12.08□□□□□ -0.48
SCAF11-204ENST00000395454 PVRIGQ6DKI7 326 aa12.08□□□□□ -0.48
SCAF11-204ENST00000395454 BRD3OSQ6XYD6 125 aa12.08□□□□□ -0.48
SCAF11-204ENST00000395454 NANPQ8TBE9 248 aa12.08□□□□□ -0.48
SCAF11-204ENST00000395454 RPEQ96AT9 228 aa12.08□□□□□ -0.48
SCAF11-204ENST00000395454 RITA1Q96K30 269 aa12.08□□□□□ -0.48
SCAF11-204ENST00000395454 MGST2Q99735 147 aa12.08□□□□□ -0.48
SCAF11-204ENST00000395454 GGTLC1Q9BX51 225 aa12.08□□□□□ -0.48
SCAF11-204ENST00000395454 KCNIP2Q9NS61 270 aa12.08□□□□□ -0.48
SCAF11-204ENST00000395454 LOC102723971A0A1B0GUV8 181 aa12.07□□□□□ -0.48
SCAF11-204ENST00000395454 MAP1LC3B2A6NCE7 125 aa12.07□□□□□ -0.48
SCAF11-204ENST00000395454 DNASE2O00115 360 aaPredicted RBP12.07□□□□□ -0.48
SCAF11-204ENST00000395454 MAS1LP35410 378 aa12.07□□□□□ -0.48
SCAF11-204ENST00000395454 UBE2E1P51965 193 aa12.07□□□□□ -0.48
SCAF11-204ENST00000395454 KLF17Q5JT82 389 aaPredicted RBP12.07□□□□□ -0.48
SCAF11-204ENST00000395454 SUN5Q8TC36 379 aa12.07□□□□□ -0.48
SCAF11-204ENST00000395454 RARRES2Q99969 163 aa12.07□□□□□ -0.48
SCAF11-204ENST00000395454 MAP1LC3BQ9GZQ8 125 aa12.07□□□□□ -0.48
SCAF11-204ENST00000395454 SLC25A17O43808 307 aa12.07□□□□□ -0.48
SCAF11-204ENST00000395454 HTR1DP28221 377 aa12.07□□□□□ -0.48
SCAF11-204ENST00000395454 LGALS4P56470 323 aa12.07□□□□□ -0.48
SCAF11-204ENST00000395454 RUSC1-AS1Q66K80 236 aa12.07□□□□□ -0.48
SCAF11-204ENST00000395454 OR10G9Q8NGN4 311 aa12.07□□□□□ -0.48
SCAF11-204ENST00000395454 OR10G7Q8NGN6 311 aa12.07□□□□□ -0.48
SCAF11-204ENST00000395454 HINT2Q9BX68 163 aa12.07□□□□□ -0.48
SCAF11-204ENST00000395454 DPM3Q9P2X0 92 aa12.07□□□□□ -0.48
SCAF11-204ENST00000395454 IGHV1-69DA0A0B4J2H0 117 aa12.06□□□□□ -0.48
SCAF11-204ENST00000395454 A0A1B0GV50 99 aa12.06□□□□□ -0.48
SCAF11-204ENST00000395454 E7EUB6 86 aa12.06□□□□□ -0.48
SCAF11-204ENST00000395454 IGHV1-69P01742 117 aa12.06□□□□□ -0.48
SCAF11-204ENST00000395454 SRP19P09132 144 aaKnown RBP12.06□□□□□ -0.48
SCAF11-204ENST00000395454 BCL2P10415 239 aa12.06□□□□□ -0.48
SCAF11-204ENST00000395454 PSG5Q15238 335 aa12.06□□□□□ -0.48
SCAF11-204ENST00000395454 PRSS8Q16651 343 aa12.06□□□□□ -0.48
SCAF11-204ENST00000395454 MMD2Q8IY49 270 aa12.06□□□□□ -0.48
SCAF11-204ENST00000395454 OR10W1Q8NGF6 305 aa12.06□□□□□ -0.48
SCAF11-204ENST00000395454 CFHR4Q92496 578 aa12.06□□□□□ -0.48
SCAF11-204ENST00000395454 ACTR3CQ9C0K3 210 aaPredicted RBP12.06□□□□□ -0.48
SCAF11-204ENST00000395454 NSD1Q96L73 2696 aaPredicted RBP12.06□□□□□ -0.48
SCAF11-204ENST00000395454 TEP1Q99973 2627 aaKnown RBP12.06□□□□□ -0.48
SCAF11-204ENST00000395454 YIF1AO95070 293 aa12.05□□□□□ -0.48
SCAF11-204ENST00000395454 HNF1AP20823 631 aa12.05□□□□□ -0.48
SCAF11-204ENST00000395454 CEACAM3P40198 252 aa12.05□□□□□ -0.48
SCAF11-204ENST00000395454 ERHP84090 104 aaKnown RBP12.05□□□□□ -0.48
SCAF11-204ENST00000395454 WT1-ASQ06250 92 aa12.05□□□□□ -0.48
SCAF11-204ENST00000395454 ACOT6Q3I5F7 207 aaPredicted RBP12.05□□□□□ -0.48
SCAF11-204ENST00000395454 TEPPQ6URK8 271 aa12.05□□□□□ -0.48
SCAF11-204ENST00000395454 LCN15Q6UWW0 184 aa12.05□□□□□ -0.48
SCAF11-204ENST00000395454 PIP4P2Q8N4L2 257 aa12.05□□□□□ -0.48
SCAF11-204ENST00000395454 ZNF114Q8NC26 417 aa12.05□□□□□ -0.48
SCAF11-204ENST00000395454 CLRN3Q8NCR9 226 aa12.05□□□□□ -0.48
SCAF11-204ENST00000395454 CACNG8Q8WXS5 425 aa12.05□□□□□ -0.48
SCAF11-204ENST00000395454 TPSG1Q9NRR2 321 aa12.05□□□□□ -0.48
SCAF11-204ENST00000395454 SIGLEC9Q9Y336 463 aa12.05□□□□□ -0.48
SCAF11-204ENST00000395454 PLXNB1O43157 2135 aa12.05□□□□□ -0.48
SCAF11-204ENST00000395454 IGHV3-72A0A0B4J1Y9 119 aa12.05□□□□□ -0.48
SCAF11-204ENST00000395454 OOSP1A8MZH6 123 aa12.05□□□□□ -0.48
SCAF11-204ENST00000395454 NPFFO15130 113 aa12.05□□□□□ -0.48
SCAF11-204ENST00000395454 OPN1MWP04001 364 aa12.05□□□□□ -0.48
SCAF11-204ENST00000395454 OPN1MW2P0DN77 364 aa12.05□□□□□ -0.48
SCAF11-204ENST00000395454 OPN1MW3P0DN78 364 aa12.05□□□□□ -0.48
SCAF11-204ENST00000395454 SAA4P35542 130 aa12.05□□□□□ -0.48
SCAF11-204ENST00000395454 GPX4P36969 197 aaPredicted RBP12.05□□□□□ -0.48
SCAF11-204ENST00000395454 SRP14P37108 136 aaKnown RBP12.05□□□□□ -0.48
SCAF11-204ENST00000395454 TAGLN2P37802 199 aaKnown RBP12.05□□□□□ -0.48
SCAF11-204ENST00000395454 NPBWR1P48145 328 aa12.05□□□□□ -0.48
SCAF11-204ENST00000395454 TMEM144Q7Z5S9 345 aa12.05□□□□□ -0.48
SCAF11-204ENST00000395454 MOB3BQ86TA1 216 aa12.05□□□□□ -0.48
SCAF11-204ENST00000395454 TEX29Q8N6K0 151 aa12.05□□□□□ -0.48
SCAF11-204ENST00000395454 RNASEH2CQ8TDP1 164 aaKnown RBP12.05□□□□□ -0.48
SCAF11-204ENST00000395454 C22orf15Q8WYQ4 148 aa12.05□□□□□ -0.48
SCAF11-204ENST00000395454 SLC39A9Q9NUM3 307 aa12.05□□□□□ -0.48
SCAF11-204ENST00000395454 CYB5BO43169 146 aa12.04□□□□□ -0.48
SCAF11-204ENST00000395454 VENTXO95231 258 aa12.04□□□□□ -0.48
SCAF11-204ENST00000395454 RPL29P47914 159 aaKnown RBP12.04□□□□□ -0.48
SCAF11-204ENST00000395454 PRR20EP86478 221 aa12.04□□□□□ -0.48
SCAF11-204ENST00000395454 PRR20CP86479 221 aa12.04□□□□□ -0.48
SCAF11-204ENST00000395454 PRR20DP86480 221 aa12.04□□□□□ -0.48
SCAF11-204ENST00000395454 PRR20BP86481 221 aa12.04□□□□□ -0.48
SCAF11-204ENST00000395454 PRR20AP86496 221 aa12.04□□□□□ -0.48
SCAF11-204ENST00000395454 CD69Q07108 199 aa12.04□□□□□ -0.48
SCAF11-204ENST00000395454 HAGHQ16775 308 aa12.04□□□□□ -0.48
SCAF11-204ENST00000395454 LHFPL4Q7Z7J7 247 aa12.04□□□□□ -0.48
SCAF11-204ENST00000395454 RAB24Q969Q5 203 aa12.04□□□□□ -0.48
SCAF11-204ENST00000395454 P2RX4Q99571 388 aa12.04□□□□□ -0.48
SCAF11-204ENST00000395454 TMEM160Q9NX00 188 aa12.04□□□□□ -0.48
SCAF11-204ENST00000395454 IGLC7A0M8Q6 106 aa12.03□□□□□ -0.48
SCAF11-204ENST00000395454 SMCO3A2RU48 225 aa12.03□□□□□ -0.48
SCAF11-204ENST00000395454 FAM74A7A6NL05 159 aa12.03□□□□□ -0.48
SCAF11-204ENST00000395454 INAFM1C9JVW0 142 aa12.03□□□□□ -0.48
SCAF11-204ENST00000395454 COMPP49747 757 aaPredicted RBP12.03□□□□□ -0.48
SCAF11-204ENST00000395454 FAM74A3Q4VXF1 159 aa12.03□□□□□ -0.48
SCAF11-204ENST00000395454 C10orf55Q5SWW7 151 aa12.03□□□□□ -0.48
SCAF11-204ENST00000395454 MINOS1Q5TGZ0 78 aa12.03□□□□□ -0.48
SCAF11-204ENST00000395454 C17orf50Q8WW18 174 aa12.03□□□□□ -0.48
SCAF11-204ENST00000395454 SLC25A22Q9H936 323 aa12.03□□□□□ -0.48
SCAF11-204ENST00000395454 PXMP4Q9Y6I8 212 aa12.03□□□□□ -0.48
SCAF11-204ENST00000395454 MINOS1-NBL1R4GNA1 71 aa12.03□□□□□ -0.48
SCAF11-204ENST00000395454 TIMM23O14925 209 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms