RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 GNB4Q9HAV0 340 aa5.24□□□□□ -1.57
UBBP1-201ENST00000392399 PEF1Q9UBV8 284 aaKnown RBP5.24□□□□□ -1.57
UBBP1-201ENST00000392399 CACNG5Q9UF02 275 aa5.24□□□□□ -1.57
UBBP1-201ENST00000392399 FBXL7Q9UJT9 491 aa5.24□□□□□ -1.57
UBBP1-201ENST00000392399 F11RQ9Y624 299 aaKnown RBP5.24□□□□□ -1.57
UBBP1-201ENST00000392399 NOTCH3Q9UM47 2321 aa5.24□□□□□ -1.57
UBBP1-201ENST00000392399 TRBV7-1A0A0A6YYK4 115 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 LINC01619G3V211 115 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 CORTO00230 105 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 SSNA1O43805 119 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 PITX3O75364 302 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 MED6O75586 246 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 OR2J3O76001 311 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 PRH1P02810 166 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 REG1AP05451 166 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 HOXB5P09067 269 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 CD33P20138 364 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 ZP3P21754 424 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 HTR2BP41595 481 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 RAP2BP61225 183 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 TNFRSF9Q07011 255 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 FHL3Q13643 280 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 C15orf32Q32M92 178 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 GGNBP1Q5YKI7 109 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 HIST2H2BDQ6DRA6 164 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 C18orf65Q6ZTR6 163 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 OR11H7Q8NGC8 314 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 OR1S1Q8NH92 325 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 EEF1AKMT3Q96AZ1 226 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 RAX2Q96IS3 184 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 SEC22CQ9BRL7 303 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 MCRIP2Q9BUT9 160 aaKnown RBP5.23□□□□□ -1.57
UBBP1-201ENST00000392399 GPR61Q9BZJ8 451 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 HIPK2Q9H2X6 1198 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 HEYLQ9NQ87 328 aaPredicted RBP5.23□□□□□ -1.57
UBBP1-201ENST00000392399 GAR1Q9NY12 217 aaKnown RBP5.23□□□□□ -1.57
UBBP1-201ENST00000392399 PRR13Q9NZ81 148 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 HSPB7Q9UBY9 170 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 CMYA5Q8N3K9 4069 aa5.23□□□□□ -1.57
UBBP1-201ENST00000392399 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.22□□□□□ -1.57
UBBP1-201ENST00000392399 CEBPZOSA8MTT3 80 aa5.22□□□□□ -1.57
UBBP1-201ENST00000392399 BOLA2-SMG1P6H3BVE0 249 aa5.22□□□□□ -1.57
UBBP1-201ENST00000392399 NDUFB8O95169 186 aa5.22□□□□□ -1.57
UBBP1-201ENST00000392399 IGHV3-11P01762 117 aa5.22□□□□□ -1.57
UBBP1-201ENST00000392399 FCGR2BP31994 310 aaPredicted RBP5.22□□□□□ -1.57
UBBP1-201ENST00000392399 HOXA1P49639 335 aaPredicted RBP5.22□□□□□ -1.57
UBBP1-201ENST00000392399 EXOSC2Q13868 293 aaKnown RBP5.22□□□□□ -1.57
UBBP1-201ENST00000392399 BSXQ3C1V8 233 aa5.22□□□□□ -1.57
UBBP1-201ENST00000392399 ZFP69Q49AA0 526 aa5.22□□□□□ -1.57
UBBP1-201ENST00000392399 PVRIGQ6DKI7 326 aa5.22□□□□□ -1.57
UBBP1-201ENST00000392399 ETV3LQ6ZN32 361 aa5.22□□□□□ -1.57
UBBP1-201ENST00000392399 C12orf45Q8N5I9 185 aaPredicted RBP5.22□□□□□ -1.57
UBBP1-201ENST00000392399 LINC00482Q8N8I6 264 aa5.22□□□□□ -1.57
UBBP1-201ENST00000392399 RCC1LQ96I51 464 aaKnown RBP5.22□□□□□ -1.57
UBBP1-201ENST00000392399 HYLS1Q96M11 299 aa5.22□□□□□ -1.57
UBBP1-201ENST00000392399 CIB3Q96Q77 187 aaPredicted RBP5.22□□□□□ -1.57
UBBP1-201ENST00000392399 OR5B12Q96R08 314 aa5.22□□□□□ -1.57
UBBP1-201ENST00000392399 TXN2Q99757 166 aa5.22□□□□□ -1.57
UBBP1-201ENST00000392399 ZNF436Q9C0F3 470 aaPredicted RBP5.22□□□□□ -1.57
UBBP1-201ENST00000392399 ZMAT5Q9UDW3 170 aaKnown RBP5.22□□□□□ -1.57
UBBP1-201ENST00000392399 U3KQ87 197 aa5.22□□□□□ -1.57
UBBP1-201ENST00000392399 NOTCH1P46531 2555 aa5.22□□□□□ -1.57
UBBP1-201ENST00000392399 IGHV4OR15-8A0A075B7B6 117 aa5.21□□□□□ -1.58
UBBP1-201ENST00000392399 A0A087WW49 117 aa5.21□□□□□ -1.58
UBBP1-201ENST00000392399 GGCTO75223 188 aaKnown RBP5.21□□□□□ -1.58
UBBP1-201ENST00000392399 ADAP1O75689 374 aa5.21□□□□□ -1.58
UBBP1-201ENST00000392399 RNASE2P10153 161 aaKnown RBP5.21□□□□□ -1.58
UBBP1-201ENST00000392399 EIF2B2P49770 351 aaKnown RBP5.21□□□□□ -1.58
UBBP1-201ENST00000392399 INSL3P51460 131 aa5.21□□□□□ -1.58
UBBP1-201ENST00000392399 RPP30P78346 268 aaKnown RBP5.21□□□□□ -1.58
UBBP1-201ENST00000392399 CYCSP99999 105 aaKnown RBP5.21□□□□□ -1.58
UBBP1-201ENST00000392399 ID3Q02535 119 aa5.21□□□□□ -1.58
UBBP1-201ENST00000392399 FGL1Q08830 312 aa5.21□□□□□ -1.58
UBBP1-201ENST00000392399 DEFB136Q30KP8 78 aa5.21□□□□□ -1.58
UBBP1-201ENST00000392399 C2orf83Q53S99 150 aa5.21□□□□□ -1.58
UBBP1-201ENST00000392399 SPSB3Q6PJ21 355 aa5.21□□□□□ -1.58
UBBP1-201ENST00000392399 OR52B4Q8NGK2 314 aa5.21□□□□□ -1.58
UBBP1-201ENST00000392399 ZNF502Q8TBZ5 544 aa5.21□□□□□ -1.58
UBBP1-201ENST00000392399 RNASEH2CQ8TDP1 164 aaKnown RBP5.21□□□□□ -1.58
UBBP1-201ENST00000392399 DTD1Q8TEA8 209 aa5.21□□□□□ -1.58
UBBP1-201ENST00000392399 SCARB1Q8WTV0 552 aa5.21□□□□□ -1.58
UBBP1-201ENST00000392399 C21orf62Q9NYP8 219 aa5.21□□□□□ -1.58
UBBP1-201ENST00000392399 MGAT4CQ9UBM8 478 aa5.21□□□□□ -1.58
UBBP1-201ENST00000392399 DMRT1Q9Y5R6 373 aa5.21□□□□□ -1.58
UBBP1-201ENST00000392399 FBN3Q75N90 2809 aa5.21□□□□□ -1.58
UBBP1-201ENST00000392399 RPS10-NUDT3A0A1W2PQS6 291 aa5.2□□□□□ -1.58
UBBP1-201ENST00000392399 ANKRD34BA5PLL1 514 aa5.2□□□□□ -1.58
UBBP1-201ENST00000392399 MFSD2BA6NFX1 497 aa5.2□□□□□ -1.58
UBBP1-201ENST00000392399 A6NJY4 79 aa5.2□□□□□ -1.58
UBBP1-201ENST00000392399 I3L2K1 104 aa5.2□□□□□ -1.58
UBBP1-201ENST00000392399 K7EIM0 57 aa5.2□□□□□ -1.58
UBBP1-201ENST00000392399 OVOL1O14753 267 aa5.2□□□□□ -1.58
UBBP1-201ENST00000392399 SYNGR2O43760 224 aa5.2□□□□□ -1.58
UBBP1-201ENST00000392399 IFNA10P01566 189 aa5.2□□□□□ -1.58
UBBP1-201ENST00000392399 CLEC3BP05452 202 aa5.2□□□□□ -1.58
UBBP1-201ENST00000392399 CXCL3P19876 107 aa5.2□□□□□ -1.58
UBBP1-201ENST00000392399 HOXD3P31249 432 aaPredicted RBP5.2□□□□□ -1.58
UBBP1-201ENST00000392399 NKX2-1P43699 371 aaPredicted RBP5.2□□□□□ -1.58
UBBP1-201ENST00000392399 NPBWR1P48145 328 aa5.2□□□□□ -1.58
UBBP1-201ENST00000392399 MFAP2P55001 183 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms