RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 SMIM10L1P0DMW3 83 aa13.58□□□□□ -0.24
SHANK1-204ENST00000391814 BCL6BQ8N143 479 aaPredicted RBP13.58□□□□□ -0.24
SHANK1-204ENST00000391814 SMIM10Q96HG1 83 aa13.58□□□□□ -0.24
SHANK1-204ENST00000391814 TRAV8-1A0A0A6YYK1 113 aa13.58□□□□□ -0.24
SHANK1-204ENST00000391814 CEACAM4O75871 244 aa13.58□□□□□ -0.24
SHANK1-204ENST00000391814 NPPCP23582 126 aa13.58□□□□□ -0.24
SHANK1-204ENST00000391814 COL24A1Q17RW2 1714 aa13.58□□□□□ -0.24
SHANK1-204ENST00000391814 EEF1AKMT3Q96AZ1 226 aa13.58□□□□□ -0.24
SHANK1-204ENST00000391814 PRRC2BQ5JSZ5 2229 aaKnown RBP13.58□□□□□ -0.24
SHANK1-204ENST00000391814 ASCC3Q8N3C0 2202 aaKnown RBP13.58□□□□□ -0.24
SHANK1-204ENST00000391814 NPIPB11E5RHQ5 1161 aa13.58□□□□□ -0.24
SHANK1-204ENST00000391814 MPZP25189 248 aa13.58□□□□□ -0.24
SHANK1-204ENST00000391814 OCIAD2Q56VL3 154 aa13.58□□□□□ -0.24
SHANK1-204ENST00000391814 ZNRF1Q8ND25 227 aa13.58□□□□□ -0.24
SHANK1-204ENST00000391814 TMEM74BQ9NUR3 256 aa13.58□□□□□ -0.24
SHANK1-204ENST00000391814 C1orf174Q8IYL3 243 aa13.57□□□□□ -0.24
SHANK1-204ENST00000391814 LOC105371242A0A075B767 164 aa13.57□□□□□ -0.24
SHANK1-204ENST00000391814 PPIAL4CA0A0B4J2A2 164 aa13.57□□□□□ -0.24
SHANK1-204ENST00000391814 C16orf97H3BN30 126 aa13.57□□□□□ -0.24
SHANK1-204ENST00000391814 FOXH1O75593 365 aa13.57□□□□□ -0.24
SHANK1-204ENST00000391814 PPIAL4GP0DN37 164 aa13.57□□□□□ -0.24
SHANK1-204ENST00000391814 HTN3P15516 51 aa13.57□□□□□ -0.24
SHANK1-204ENST00000391814 KIR3DL3Q8N743 410 aa13.57□□□□□ -0.24
SHANK1-204ENST00000391814 TAF1LQ8IZX4 1826 aa13.57□□□□□ -0.24
SHANK1-204ENST00000391814 TNFRSF6BO95407 300 aa13.57□□□□□ -0.24
SHANK1-204ENST00000391814 CDKN1AP38936 164 aa13.57□□□□□ -0.24
SHANK1-204ENST00000391814 PSMG4Q5JS54 123 aa13.57□□□□□ -0.24
SHANK1-204ENST00000391814 CIARTQ8N365 385 aaPredicted RBP13.57□□□□□ -0.24
SHANK1-204ENST00000391814 TMEM101Q96IK0 257 aa13.57□□□□□ -0.24
SHANK1-204ENST00000391814 SRSF1Q07955 248 aaKnown RBP eCLIP13.57□□□□□ -0.24
SHANK1-204ENST00000391814 ACP7Q6ZNF0 438 aa13.57□□□□□ -0.24
SHANK1-204ENST00000391814 CTHRC1Q96CG8 243 aa13.57□□□□□ -0.24
SHANK1-204ENST00000391814 CST9LQ9H4G1 147 aa13.57□□□□□ -0.24
SHANK1-204ENST00000391814 C3orf79P0CE67 100 aa13.56□□□□□ -0.24
SHANK1-204ENST00000391814 NEUROG3Q9Y4Z2 214 aa13.56□□□□□ -0.24
SHANK1-204ENST00000391814 WNK3Q9BYP7 1800 aa13.56□□□□□ -0.24
SHANK1-204ENST00000391814 COX6B1P14854 86 aa13.56□□□□□ -0.24
SHANK1-204ENST00000391814 BMPERQ8N8U9 685 aa13.56□□□□□ -0.24
SHANK1-204ENST00000391814 NDUFA2O43678 99 aa13.56□□□□□ -0.24
SHANK1-204ENST00000391814 CNTFRP26992 372 aa13.56□□□□□ -0.24
SHANK1-204ENST00000391814 TMEM171Q8WVE6 324 aa13.56□□□□□ -0.24
SHANK1-204ENST00000391814 A0A0G2JMM0 328 aa13.56□□□□□ -0.24
SHANK1-204ENST00000391814 A0A1W2PPB8 328 aa13.56□□□□□ -0.24
SHANK1-204ENST00000391814 KIR3DP1A8MWS1 328 aa13.56□□□□□ -0.24
SHANK1-204ENST00000391814 IFI27L1Q96BM0 104 aa13.56□□□□□ -0.24
SHANK1-204ENST00000391814 CD33P20138 364 aa13.55□□□□□ -0.24
SHANK1-204ENST00000391814 OR13A1Q8NGR1 328 aa13.55□□□□□ -0.24
SHANK1-204ENST00000391814 IGHV1-69-2A0A0G2JMI3 117 aa13.55□□□□□ -0.24
SHANK1-204ENST00000391814 PRR32B1ATL7 298 aa13.55□□□□□ -0.24
SHANK1-204ENST00000391814 CD69Q07108 199 aa13.55□□□□□ -0.24
SHANK1-204ENST00000391814 SRSF6Q13247 344 aaKnown RBP13.55□□□□□ -0.24
SHANK1-204ENST00000391814 PLXNB2O15031 1838 aa13.55□□□□□ -0.24
SHANK1-204ENST00000391814 HGFACQ04756 655 aa13.55□□□□□ -0.24
SHANK1-204ENST00000391814 MESP2Q0VG99 397 aa13.55□□□□□ -0.24
SHANK1-204ENST00000391814 COL18A1P39060 1754 aa13.55□□□□□ -0.24
SHANK1-204ENST00000391814 OR9G4Q8NGQ1 327 aa13.55□□□□□ -0.24
SHANK1-204ENST00000391814 TSKUQ8WUA8 353 aa13.55□□□□□ -0.24
SHANK1-204ENST00000391814 RSPO3Q9BXY4 272 aaPredicted RBP13.55□□□□□ -0.24
SHANK1-204ENST00000391814 HS3ST3B1Q9Y662 390 aa13.55□□□□□ -0.24
SHANK1-204ENST00000391814 STRCP1A6NGW2 1772 aa13.54□□□□□ -0.24
SHANK1-204ENST00000391814 IGHV2-70P01814 119 aa13.54□□□□□ -0.24
SHANK1-204ENST00000391814 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.54□□□□□ -0.24
SHANK1-204ENST00000391814 PLPPR1Q8TBJ4 325 aa13.54□□□□□ -0.24
SHANK1-204ENST00000391814 LYZL4Q96KX0 146 aa13.54□□□□□ -0.24
SHANK1-204ENST00000391814 MCRIP2Q9BUT9 160 aaKnown RBP13.54□□□□□ -0.24
SHANK1-204ENST00000391814 SNHG12Q9BXW3 62 aa13.54□□□□□ -0.24
SHANK1-204ENST00000391814 EFNB3Q15768 340 aa13.54□□□□□ -0.24
SHANK1-204ENST00000391814 PPIFP30405 207 aaKnown RBP13.54□□□□□ -0.24
SHANK1-204ENST00000391814 FAM214BQ7L5A3 538 aa13.54□□□□□ -0.24
SHANK1-204ENST00000391814 IGHV3OR16-8A0A075B7F1 116 aa13.54□□□□□ -0.24
SHANK1-204ENST00000391814 SPATA31B1PQ5VZV4 182 aa13.54□□□□□ -0.24
SHANK1-204ENST00000391814 DCTN5Q9BTE1 182 aa13.54□□□□□ -0.24
SHANK1-204ENST00000391814 IGKV1D-8A0A087WSZ0 117 aa13.54□□□□□ -0.24
SHANK1-204ENST00000391814 HIST1H4AP62805 103 aaKnown RBP13.54□□□□□ -0.24
SHANK1-204ENST00000391814 PSG3Q16557 428 aa13.54□□□□□ -0.24
SHANK1-204ENST00000391814 OR9G1Q8NH87 305 aa13.54□□□□□ -0.24
SHANK1-204ENST00000391814 ERG28Q9UKR5 140 aa13.54□□□□□ -0.24
SHANK1-204ENST00000391814 MCM3APO60318 1980 aa13.53□□□□□ -0.24
SHANK1-204ENST00000391814 LCNL1Q6ZST4 164 aa13.53□□□□□ -0.24
SHANK1-204ENST00000391814 SLC25A15Q9Y619 301 aa13.53□□□□□ -0.24
SHANK1-204ENST00000391814 RAB9AP51151 201 aa13.53□□□□□ -0.24
SHANK1-204ENST00000391814 DNM1P46Q6ZS02 220 aa13.53□□□□□ -0.24
SHANK1-204ENST00000391814 CHD5Q8TDI0 1954 aa13.53□□□□□ -0.24
SHANK1-204ENST00000391814 C21orf140B9A014 251 aa13.53□□□□□ -0.24
SHANK1-204ENST00000391814 ATP5IP56385 69 aaPredicted RBP13.53□□□□□ -0.24
SHANK1-204ENST00000391814 REPIN1Q9BWE0 567 aaKnown RBP13.53□□□□□ -0.24
SHANK1-204ENST00000391814 COX5BP10606 129 aa13.53□□□□□ -0.24
SHANK1-204ENST00000391814 LINC00114Q6XXX2 140 aa13.53□□□□□ -0.24
SHANK1-204ENST00000391814 ATXN8Q156A1 80 aa13.52□□□□□ -0.24
SHANK1-204ENST00000391814 CD300EQ496F6 205 aaPredicted RBP13.52□□□□□ -0.24
SHANK1-204ENST00000391814 PAQR4Q8N4S7 273 aaPredicted RBP13.52□□□□□ -0.24
SHANK1-204ENST00000391814 ATP5L2Q7Z4Y8 100 aa13.52□□□□□ -0.24
SHANK1-204ENST00000391814 GBF1Q92538 1859 aa13.52□□□□□ -0.25
SHANK1-204ENST00000391814 PF4P02776 101 aa13.52□□□□□ -0.25
SHANK1-204ENST00000391814 OR9G9P0C7N8 305 aa13.52□□□□□ -0.25
SHANK1-204ENST00000391814 TDGF1P13385 188 aa13.52□□□□□ -0.25
SHANK1-204ENST00000391814 M0R2P5 195 aa13.52□□□□□ -0.25
SHANK1-204ENST00000391814 CNTRLQ7Z7A1 2325 aa13.52□□□□□ -0.25
SHANK1-204ENST00000391814 COL4A1P02462 1669 aa13.52□□□□□ -0.25
SHANK1-204ENST00000391814 A0A1W2PQF6 199 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms