RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 LY96Q9Y6Y9 160 aa16.52■□□□□ 0.23
SHANK1-203ENST00000391813 CACNA1GO43497 2377 aa16.52■□□□□ 0.23
SHANK1-203ENST00000391813 HILPDAQ9Y5L2 63 aa16.51■□□□□ 0.23
SHANK1-203ENST00000391813 C9JQL5 133 aa16.51■□□□□ 0.23
SHANK1-203ENST00000391813 IMMP1LQ96LU5 166 aa16.51■□□□□ 0.23
SHANK1-203ENST00000391813 RIPPLY3P57055 190 aa16.51■□□□□ 0.23
SHANK1-203ENST00000391813 ZNF319Q9P2F9 582 aa16.51■□□□□ 0.23
SHANK1-203ENST00000391813 PHLDA3Q9Y5J5 127 aa16.51■□□□□ 0.23
SHANK1-203ENST00000391813 H3BTX0 84 aa16.51■□□□□ 0.23
SHANK1-203ENST00000391813 RAXQ9Y2V3 346 aa16.51■□□□□ 0.23
SHANK1-203ENST00000391813 NPIPB6E9PJ23 425 aa16.5■□□□□ 0.23
SHANK1-203ENST00000391813 F2RL2O00254 374 aa16.5■□□□□ 0.23
SHANK1-203ENST00000391813 CD55P08174 381 aa16.5■□□□□ 0.23
SHANK1-203ENST00000391813 ID1P41134 155 aa16.5■□□□□ 0.23
SHANK1-203ENST00000391813 FAM90A2PQ658T7 463 aa16.5■□□□□ 0.23
SHANK1-203ENST00000391813 OR9G1Q8NH87 305 aa16.5■□□□□ 0.23
SHANK1-203ENST00000391813 LYZL4Q96KX0 146 aa16.5■□□□□ 0.23
SHANK1-203ENST00000391813 FREM3P0C091 2139 aa16.5■□□□□ 0.23
SHANK1-203ENST00000391813 C9orf172C9J069 976 aa16.5■□□□□ 0.23
SHANK1-203ENST00000391813 PPP1R17O96001 155 aa16.5■□□□□ 0.23
SHANK1-203ENST00000391813 TM4SF20Q53R12 229 aa16.5■□□□□ 0.23
SHANK1-203ENST00000391813 RPL39P5Q59GN2 51 aa16.5■□□□□ 0.23
SHANK1-203ENST00000391813 FAM90A9PA6NNJ1 464 aa16.5■□□□□ 0.23
SHANK1-203ENST00000391813 CCL8P80075 99 aa16.5■□□□□ 0.23
SHANK1-203ENST00000391813 C17orf82Q86X59 251 aaPredicted RBP16.5■□□□□ 0.23
SHANK1-203ENST00000391813 LOC102723996A0A087X1L8 192 aa16.5■□□□□ 0.23
SHANK1-203ENST00000391813 TMEM262E9PQX1 116 aa16.5■□□□□ 0.23
SHANK1-203ENST00000391813 DNM1P46Q6ZS02 220 aa16.5■□□□□ 0.23
SHANK1-203ENST00000391813 TSKUQ8WUA8 353 aa16.5■□□□□ 0.23
SHANK1-203ENST00000391813 FAM53AQ6NSI3 398 aaPredicted RBP16.49■□□□□ 0.23
SHANK1-203ENST00000391813 ACP7Q6ZNF0 438 aa16.49■□□□□ 0.23
SHANK1-203ENST00000391813 ZNHIT1O43257 154 aa16.49■□□□□ 0.23
SHANK1-203ENST00000391813 CIRBPQ14011 172 aaKnown RBP16.49■□□□□ 0.23
SHANK1-203ENST00000391813 ABHD17AQ96GS6 310 aa16.49■□□□□ 0.23
SHANK1-203ENST00000391813 KIR2DL4Q99706 377 aa16.49■□□□□ 0.23
SHANK1-203ENST00000391813 RABAC1Q9UI14 185 aa16.49■□□□□ 0.23
SHANK1-203ENST00000391813 CHCHD2Q9Y6H1 151 aaPredicted RBP16.49■□□□□ 0.23
SHANK1-203ENST00000391813 SNRNP200O75643 2136 aaKnown RBP16.49■□□□□ 0.23
SHANK1-203ENST00000391813 A0A1W2PRD5 423 aa16.49■□□□□ 0.23
SHANK1-203ENST00000391813 A0A1W2PRF3 423 aa16.49■□□□□ 0.23
SHANK1-203ENST00000391813 A0A1W2PRM7 423 aa16.49■□□□□ 0.23
SHANK1-203ENST00000391813 TSPOP30536 169 aa16.49■□□□□ 0.23
SHANK1-203ENST00000391813 CFHR1Q03591 330 aa16.49■□□□□ 0.23
SHANK1-203ENST00000391813 ZNF418Q8TF45 676 aaPredicted RBP16.49■□□□□ 0.23
SHANK1-203ENST00000391813 IGHV3-72A0A0B4J1Y9 119 aa16.49■□□□□ 0.23
SHANK1-203ENST00000391813 HBDP02042 147 aa16.49■□□□□ 0.23
SHANK1-203ENST00000391813 EFNB3Q15768 340 aa16.49■□□□□ 0.23
SHANK1-203ENST00000391813 CLEC2AQ6UVW9 174 aa16.49■□□□□ 0.23
SHANK1-203ENST00000391813 FOXC2Q99958 501 aa16.49■□□□□ 0.23
SHANK1-203ENST00000391813 SNHG12Q9BXW3 62 aa16.49■□□□□ 0.23
SHANK1-203ENST00000391813 NHP2Q9NX24 153 aaKnown RBP16.49■□□□□ 0.23
SHANK1-203ENST00000391813 METTL26Q96S19 204 aa16.48■□□□□ 0.23
SHANK1-203ENST00000391813 MRPL27Q9P0M9 148 aaKnown RBP16.48■□□□□ 0.23
SHANK1-203ENST00000391813 MRPS16Q9Y3D3 137 aaKnown RBP16.48■□□□□ 0.23
SHANK1-203ENST00000391813 MOSP00540 346 aa16.48■□□□□ 0.23
SHANK1-203ENST00000391813 SYT8Q8NBV8 401 aa16.48■□□□□ 0.23
SHANK1-203ENST00000391813 SCN8AQ9UQD0 1980 aa16.48■□□□□ 0.23
SHANK1-203ENST00000391813 C16orf92Q96LL3 132 aa16.48■□□□□ 0.23
SHANK1-203ENST00000391813 QRFPP83859 136 aa16.47■□□□□ 0.23
SHANK1-203ENST00000391813 SSBP4Q9BWG4 385 aaPredicted RBP16.47■□□□□ 0.23
SHANK1-203ENST00000391813 KLK15Q9H2R5 256 aa16.47■□□□□ 0.23
SHANK1-203ENST00000391813 DLX6P56179 175 aa16.47■□□□□ 0.23
SHANK1-203ENST00000391813 LEAP2Q969E1 77 aa16.47■□□□□ 0.23
SHANK1-203ENST00000391813 C3orf79P0CE67 100 aa16.47■□□□□ 0.23
SHANK1-203ENST00000391813 DOCK4Q8N1I0 1966 aa16.47■□□□□ 0.23
SHANK1-203ENST00000391813 TMEM50AO95807 157 aa16.47■□□□□ 0.23
SHANK1-203ENST00000391813 SPSB3Q6PJ21 355 aa16.47■□□□□ 0.23
SHANK1-203ENST00000391813 FADS6Q8N9I5 356 aa16.47■□□□□ 0.23
SHANK1-203ENST00000391813 TMEM14EPQ6UXP3 125 aa16.46■□□□□ 0.23
SHANK1-203ENST00000391813 C10orf126Q8N4M7 172 aa16.46■□□□□ 0.23
SHANK1-203ENST00000391813 FAM181BA6NEQ2 426 aa16.46■□□□□ 0.23
SHANK1-203ENST00000391813 GPX1P07203 203 aa16.46■□□□□ 0.23
SHANK1-203ENST00000391813 TIMP4Q99727 224 aa16.46■□□□□ 0.23
SHANK1-203ENST00000391813 LINC01559Q495D7 138 aa16.46■□□□□ 0.23
SHANK1-203ENST00000391813 RNF115Q9Y4L5 304 aa16.46■□□□□ 0.23
SHANK1-203ENST00000391813 NYNRINQ9P2P1 1898 aaKnown RBP16.46■□□□□ 0.23
SHANK1-203ENST00000391813 TP53BP1Q12888 1972 aaPredicted RBP16.46■□□□□ 0.23
SHANK1-203ENST00000391813 A0A1W2PS18 150 aa16.46■□□□□ 0.22
SHANK1-203ENST00000391813 OR13A1Q8NGR1 328 aa16.46■□□□□ 0.22
SHANK1-203ENST00000391813 TMEM190Q8WZ59 177 aa16.46■□□□□ 0.22
SHANK1-203ENST00000391813 WBP1Q96G27 269 aa16.46■□□□□ 0.22
SHANK1-203ENST00000391813 TYMSP04818 313 aa16.45■□□□□ 0.22
SHANK1-203ENST00000391813 ECSCRQ19T08 205 aa16.45■□□□□ 0.22
SHANK1-203ENST00000391813 EPDR1Q9UM22 224 aa16.45■□□□□ 0.22
SHANK1-203ENST00000391813 GAGE1Q13065 139 aa16.45■□□□□ 0.22
SHANK1-203ENST00000391813 PPBPP02775 128 aa16.45■□□□□ 0.22
SHANK1-203ENST00000391813 COX11Q9Y6N1 276 aa16.45■□□□□ 0.22
SHANK1-203ENST00000391813 CHD5Q8TDI0 1954 aa16.45■□□□□ 0.22
SHANK1-203ENST00000391813 IGLV3-32A0A0A0MS00 114 aa16.45■□□□□ 0.22
SHANK1-203ENST00000391813 SAMD5Q5TGI4 173 aa16.45■□□□□ 0.22
SHANK1-203ENST00000391813 MRPS18CQ9Y3D5 142 aaKnown RBP16.45■□□□□ 0.22
SHANK1-203ENST00000391813 C15orf61A6NNL5 157 aa16.44■□□□□ 0.22
SHANK1-203ENST00000391813 IGHV3-48P01763 117 aa16.44■□□□□ 0.22
SHANK1-203ENST00000391813 PFN1P07737 140 aaKnown RBP16.44■□□□□ 0.22
SHANK1-203ENST00000391813 ZNF497Q6ZNH5 498 aa16.44■□□□□ 0.22
SHANK1-203ENST00000391813 OTORQ9NRC9 128 aa16.44■□□□□ 0.22
SHANK1-203ENST00000391813 TM4SF5O14894 197 aa16.44■□□□□ 0.22
SHANK1-203ENST00000391813 WNT9BO14905 357 aa16.44■□□□□ 0.22
SHANK1-203ENST00000391813 SPACA3Q8IXA5 215 aa16.44■□□□□ 0.22
SHANK1-203ENST00000391813 TEX45Q8NA69 505 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms