RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 APCP25054 2843 aa6.99□□□□□ -1.29
RNU1-28P-201ENST00000383861 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.99□□□□□ -1.29
RNU1-28P-201ENST00000383861 CELSR2Q9HCU4 2923 aa6.98□□□□□ -1.29
RNU1-28P-201ENST00000383861 TRAV41A0A0B4J266 112 aa6.98□□□□□ -1.29
RNU1-28P-201ENST00000383861 UBE2L5PA0A1B0GUS4 154 aa6.98□□□□□ -1.29
RNU1-28P-201ENST00000383861 SMCO3A2RU48 225 aa6.98□□□□□ -1.29
RNU1-28P-201ENST00000383861 UMAD1C9J7I0 102 aa6.98□□□□□ -1.29
RNU1-28P-201ENST00000383861 H3BUA1 57 aa6.98□□□□□ -1.29
RNU1-28P-201ENST00000383861 TRIM77I1YAP6 450 aa6.98□□□□□ -1.29
RNU1-28P-201ENST00000383861 BRI3O95415 125 aa6.98□□□□□ -1.29
RNU1-28P-201ENST00000383861 REG1AP05451 166 aa6.98□□□□□ -1.29
RNU1-28P-201ENST00000383861 EGR2P11161 476 aaPredicted RBP6.98□□□□□ -1.29
RNU1-28P-201ENST00000383861 NDPQ00604 133 aa6.98□□□□□ -1.29
RNU1-28P-201ENST00000383861 AKR1C1Q04828 323 aa6.98□□□□□ -1.29
RNU1-28P-201ENST00000383861 BTNL8Q6UX41 500 aa6.98□□□□□ -1.29
RNU1-28P-201ENST00000383861 IL17RELQ6ZVW7 336 aa6.98□□□□□ -1.29
RNU1-28P-201ENST00000383861 SLC16A13Q7RTY0 426 aa6.98□□□□□ -1.29
RNU1-28P-201ENST00000383861 CENPVQ7Z7K6 275 aaPredicted RBP6.98□□□□□ -1.29
RNU1-28P-201ENST00000383861 HSD17B11Q8NBQ5 300 aa6.98□□□□□ -1.29
RNU1-28P-201ENST00000383861 RNF141Q8WVD5 230 aa6.98□□□□□ -1.29
RNU1-28P-201ENST00000383861 TAF15Q92804 592 aaKnown RBP eCLIP6.98□□□□□ -1.29
RNU1-28P-201ENST00000383861 MISP3Q96FF7 219 aa6.98□□□□□ -1.29
RNU1-28P-201ENST00000383861 FAM103A1Q9BTL3 118 aaKnown RBP6.98□□□□□ -1.29
RNU1-28P-201ENST00000383861 SLC25A32Q9H2D1 315 aa6.98□□□□□ -1.29
RNU1-28P-201ENST00000383861 GCN1Q92616 2671 aaKnown RBP6.98□□□□□ -1.29
RNU1-28P-201ENST00000383861 CRYBG3Q68DQ2 2970 aa6.97□□□□□ -1.29
RNU1-28P-201ENST00000383861 CFDP00746 253 aaPredicted RBP6.97□□□□□ -1.29
RNU1-28P-201ENST00000383861 MBP02144 154 aa6.97□□□□□ -1.29
RNU1-28P-201ENST00000383861 FABP1P07148 127 aa6.97□□□□□ -1.29
RNU1-28P-201ENST00000383861 APELAP0DMC3 54 aa6.97□□□□□ -1.29
RNU1-28P-201ENST00000383861 MDKP21741 143 aaPredicted RBP6.97□□□□□ -1.29
RNU1-28P-201ENST00000383861 FGF7P21781 194 aa6.97□□□□□ -1.29
RNU1-28P-201ENST00000383861 ATP6V0CP27449 155 aa6.97□□□□□ -1.29
RNU1-28P-201ENST00000383861 ECSCRQ19T08 205 aa6.97□□□□□ -1.29
RNU1-28P-201ENST00000383861 ARSJQ5FYB0 599 aaPredicted RBP6.97□□□□□ -1.29
RNU1-28P-201ENST00000383861 ASPHD1Q5U4P2 390 aa6.97□□□□□ -1.29
RNU1-28P-201ENST00000383861 ALKAL2Q6UX46 152 aa6.97□□□□□ -1.29
RNU1-28P-201ENST00000383861 DPPA3Q6W0C5 159 aa6.97□□□□□ -1.29
RNU1-28P-201ENST00000383861 OR2G3Q8NGZ4 309 aa6.97□□□□□ -1.29
RNU1-28P-201ENST00000383861 TXN2Q99757 166 aa6.97□□□□□ -1.29
RNU1-28P-201ENST00000383861 GAR1Q9NY12 217 aaKnown RBP6.97□□□□□ -1.29
RNU1-28P-201ENST00000383861 WNK2Q9Y3S1 2297 aa6.97□□□□□ -1.29
RNU1-28P-201ENST00000383861 MED13LQ71F56 2210 aa6.96□□□□□ -1.29
RNU1-28P-201ENST00000383861 IGLV11-55A0A075B6I3 123 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 TRAV30A0A087WSZ9 112 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 TMEM89A2RUT3 159 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 FAM223BA6NKX1 122 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 I3L2K1 104 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 MT-CO2P00403 227 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 CRYBA1P05813 215 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 NPBWR1P48145 328 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 SULT1A2P50226 295 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 SELENOTP62341 195 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 BLCAPP62952 87 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 SLC35B1P78383 322 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 BLOC1S1P78537 153 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 GAMTQ14353 236 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 NDUFA5Q16718 116 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 C19orf54Q5BKX5 351 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 FAM209BQ5JX69 171 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 AKR1C8PQ5T2L2 129 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 ACSM6Q6P461 480 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 TREML4Q6UXN2 200 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 FAM223AQ8IWN6 122 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 NECAP1Q8NC96 275 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 TMEM116Q8NCL8 245 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 OR5T1Q8NG75 326 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 OR4X1Q8NH49 305 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 VN1R17PQ8TDU5 208 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 TMED6Q8WW62 240 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 SAT2Q96F10 170 aaPredicted RBP6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 CXorf58Q96LI9 332 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 ATP6V0BQ99437 205 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 NPCDR1Q9BY65 106 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 TNFRSF19Q9NS68 423 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 ZNF355PQ9NSJ1 428 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 LSM4Q9Y4Z0 139 aaKnown RBP6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 PDZD2O15018 2839 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 ABCA12Q86UK0 2595 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 UNC79Q9P2D8 2635 aa6.96□□□□□ -1.3
RNU1-28P-201ENST00000383861 TRBV9A0A0B4J1U6 114 aa6.95□□□□□ -1.3
RNU1-28P-201ENST00000383861 DNAJC9-AS1A6NH13 148 aa6.95□□□□□ -1.3
RNU1-28P-201ENST00000383861 PRH1P02810 166 aa6.95□□□□□ -1.3
RNU1-28P-201ENST00000383861 FAM157CP0CG43 387 aa6.95□□□□□ -1.3
RNU1-28P-201ENST00000383861 FCGR2BP31994 310 aaPredicted RBP6.95□□□□□ -1.3
RNU1-28P-201ENST00000383861 RPL29P47914 159 aaKnown RBP6.95□□□□□ -1.3
RNU1-28P-201ENST00000383861 CAMLGP49069 296 aa6.95□□□□□ -1.3
RNU1-28P-201ENST00000383861 MFAP2P55001 183 aa6.95□□□□□ -1.3
RNU1-28P-201ENST00000383861 MFAP4P55083 255 aa6.95□□□□□ -1.3
RNU1-28P-201ENST00000383861 ACOT6Q3I5F7 207 aaPredicted RBP6.95□□□□□ -1.3
RNU1-28P-201ENST00000383861 CLLU1Q5K131 121 aa6.95□□□□□ -1.3
RNU1-28P-201ENST00000383861 Q8N2B8 174 aa6.95□□□□□ -1.3
RNU1-28P-201ENST00000383861 THAP8Q8NA92 274 aa6.95□□□□□ -1.3
RNU1-28P-201ENST00000383861 NPIPB3Q92617 1050 aa6.95□□□□□ -1.3
RNU1-28P-201ENST00000383861 ACY3Q96HD9 319 aa6.95□□□□□ -1.3
RNU1-28P-201ENST00000383861 USMG5Q96IX5 58 aa6.95□□□□□ -1.3
RNU1-28P-201ENST00000383861 FANCD2OSQ96PS1 177 aa6.95□□□□□ -1.3
RNU1-28P-201ENST00000383861 TRGV9Q99603 122 aa6.95□□□□□ -1.3
RNU1-28P-201ENST00000383861 SMR3AQ99954 134 aa6.95□□□□□ -1.3
RNU1-28P-201ENST00000383861 C19orf24Q9BVV8 132 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms