RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 ZNF367Q7RTV3 350 aa12.33□□□□□ -0.44
HMGN1-203ENST00000380748 ZBTB34Q8NCN2 500 aa12.33□□□□□ -0.44
HMGN1-203ENST00000380748 GRAMD2BQ96HH9 432 aa12.33□□□□□ -0.44
HMGN1-203ENST00000380748 TXN2Q99757 166 aa12.33□□□□□ -0.44
HMGN1-203ENST00000380748 GNG7O60262 68 aa12.32□□□□□ -0.44
HMGN1-203ENST00000380748 PPYP01298 95 aa12.32□□□□□ -0.44
HMGN1-203ENST00000380748 SPART-AS1P0CW21 52 aa12.32□□□□□ -0.44
HMGN1-203ENST00000380748 EMP1P54849 157 aa12.32□□□□□ -0.44
HMGN1-203ENST00000380748 ERVK-16P61578 105 aa12.32□□□□□ -0.44
HMGN1-203ENST00000380748 RCN1Q15293 331 aa12.32□□□□□ -0.44
HMGN1-203ENST00000380748 AADACL3Q5VUY0 350 aa12.32□□□□□ -0.44
HMGN1-203ENST00000380748 ZNF818PQ6ZRF7 136 aa12.32□□□□□ -0.44
HMGN1-203ENST00000380748 XCL2Q9UBD3 114 aa12.32□□□□□ -0.44
HMGN1-203ENST00000380748 PUS1Q9Y606 427 aaKnown RBP eCLIP12.32□□□□□ -0.44
HMGN1-203ENST00000380748 MYCBP2O75592 4640 aa12.31□□□□□ -0.44
HMGN1-203ENST00000380748 DBX1A6NMT0 343 aa12.31□□□□□ -0.44
HMGN1-203ENST00000380748 FXYD4P59646 89 aa12.31□□□□□ -0.44
HMGN1-203ENST00000380748 GNG2P59768 71 aa12.31□□□□□ -0.44
HMGN1-203ENST00000380748 TMEM56Q96MV1 263 aa12.31□□□□□ -0.44
HMGN1-203ENST00000380748 PDCD5O14737 125 aa12.3□□□□□ -0.44
HMGN1-203ENST00000380748 HTN3P15516 51 aa12.3□□□□□ -0.44
HMGN1-203ENST00000380748 ARPC4P59998 168 aa12.3□□□□□ -0.44
HMGN1-203ENST00000380748 PACRGLQ8N7B6 248 aa12.3□□□□□ -0.44
HMGN1-203ENST00000380748 DCANP1Q8TF63 244 aa12.3□□□□□ -0.44
HMGN1-203ENST00000380748 PINX1Q96BK5 328 aaKnown RBP12.3□□□□□ -0.44
HMGN1-203ENST00000380748 RAB40CQ96S21 281 aa12.3□□□□□ -0.44
HMGN1-203ENST00000380748 TMEM231Q9H6L2 316 aa12.3□□□□□ -0.44
HMGN1-203ENST00000380748 A0A1B0GU03 582 aa12.29□□□□□ -0.44
HMGN1-203ENST00000380748 KRASP01116 189 aa12.29□□□□□ -0.44
HMGN1-203ENST00000380748 G6PCP35575 357 aa12.29□□□□□ -0.44
HMGN1-203ENST00000380748 ZNF600Q6ZNG1 722 aa12.29□□□□□ -0.44
HMGN1-203ENST00000380748 SPATA12Q7Z6I5 190 aa12.29□□□□□ -0.44
HMGN1-203ENST00000380748 TMEM17Q86X19 198 aa12.29□□□□□ -0.44
HMGN1-203ENST00000380748 C6orf223Q8N319 242 aa12.29□□□□□ -0.44
HMGN1-203ENST00000380748 ACOT13Q9NPJ3 140 aa12.29□□□□□ -0.44
HMGN1-203ENST00000380748 TRAV1-2A0A0B4J238 106 aa12.28□□□□□ -0.44
HMGN1-203ENST00000380748 SNAPC5O75971 98 aa12.28□□□□□ -0.44
HMGN1-203ENST00000380748 P2RY1P47900 373 aa12.28□□□□□ -0.44
HMGN1-203ENST00000380748 MLLT11Q13015 90 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-203ENST00000380748 PSMG4Q5JS54 123 aa12.28□□□□□ -0.44
HMGN1-203ENST00000380748 TMEM88Q6PEY1 159 aa12.28□□□□□ -0.44
HMGN1-203ENST00000380748 BEST4Q8NFU0 473 aa12.28□□□□□ -0.44
HMGN1-203ENST00000380748 MOB3AQ96BX8 217 aa12.28□□□□□ -0.44
HMGN1-203ENST00000380748 C1QTNF4Q9BXJ3 329 aa12.28□□□□□ -0.44
HMGN1-203ENST00000380748 RNF167Q9H6Y7 350 aa12.28□□□□□ -0.44
HMGN1-203ENST00000380748 PRNDQ9UKY0 176 aa12.28□□□□□ -0.44
HMGN1-203ENST00000380748 SMIM30A4D0T7 59 aa12.27□□□□□ -0.45
HMGN1-203ENST00000380748 RAB3BP20337 219 aa12.27□□□□□ -0.45
HMGN1-203ENST00000380748 NPPCP23582 126 aa12.27□□□□□ -0.45
HMGN1-203ENST00000380748 FAM222AQ5U5X8 452 aa12.27□□□□□ -0.45
HMGN1-203ENST00000380748 ZNF705AQ6ZN79 300 aaPredicted RBP12.27□□□□□ -0.45
HMGN1-203ENST00000380748 FCAMRQ8WWV6 532 aa12.27□□□□□ -0.45
HMGN1-203ENST00000380748 NIPSNAP3BQ9BS92 247 aa12.27□□□□□ -0.45
HMGN1-203ENST00000380748 YTHDF1Q9BYJ9 559 aaKnown RBP12.27□□□□□ -0.45
HMGN1-203ENST00000380748 C8orf4Q9NR00 106 aa12.27□□□□□ -0.45
HMGN1-203ENST00000380748 DKK2Q9UBU2 259 aa12.27□□□□□ -0.45
HMGN1-203ENST00000380748 NBDYA0A0U1RRE5 68 aa12.26□□□□□ -0.45
HMGN1-203ENST00000380748 TMEM189A5PLL7 270 aa12.26□□□□□ -0.45
HMGN1-203ENST00000380748 ZNF705FA8MVS1 300 aaPredicted RBP12.26□□□□□ -0.45
HMGN1-203ENST00000380748 EPM2AB3EWF7 344 aa12.26□□□□□ -0.45
HMGN1-203ENST00000380748 RLN1P04808 185 aa12.26□□□□□ -0.45
HMGN1-203ENST00000380748 FCER2P06734 321 aa12.26□□□□□ -0.45
HMGN1-203ENST00000380748 ZNF705DP0CH99 300 aaPredicted RBP12.26□□□□□ -0.45
HMGN1-203ENST00000380748 ZNF705BP0CI00 300 aaPredicted RBP12.26□□□□□ -0.45
HMGN1-203ENST00000380748 F2RP25116 425 aa12.26□□□□□ -0.45
HMGN1-203ENST00000380748 LPAR6P43657 344 aa12.26□□□□□ -0.45
HMGN1-203ENST00000380748 FAM3BP58499 235 aaPredicted RBP12.26□□□□□ -0.45
HMGN1-203ENST00000380748 ZNF114Q8NC26 417 aa12.26□□□□□ -0.45
HMGN1-203ENST00000380748 NEU1Q99519 415 aa12.26□□□□□ -0.45
HMGN1-203ENST00000380748 CCDC90BQ9GZT6 254 aa12.26□□□□□ -0.45
HMGN1-203ENST00000380748 TMED3Q9Y3Q3 217 aa12.26□□□□□ -0.45
HMGN1-203ENST00000380748 FAT1Q14517 4588 aa12.26□□□□□ -0.45
HMGN1-203ENST00000380748 UBR4Q5T4S7 5183 aa12.25□□□□□ -0.45
HMGN1-203ENST00000380748 A0A1W2PS18 150 aa12.25□□□□□ -0.45
HMGN1-203ENST00000380748 CASQ2O14958 399 aaPredicted RBP12.25□□□□□ -0.45
HMGN1-203ENST00000380748 INAFM2P0DMQ5 153 aa12.25□□□□□ -0.45
HMGN1-203ENST00000380748 MYL9P24844 172 aa12.25□□□□□ -0.45
HMGN1-203ENST00000380748 GNRHRP30968 328 aa12.25□□□□□ -0.45
HMGN1-203ENST00000380748 FGF9P31371 208 aaPredicted RBP12.25□□□□□ -0.45
HMGN1-203ENST00000380748 NPBWR1P48145 328 aa12.25□□□□□ -0.45
HMGN1-203ENST00000380748 PPP5CP53041 499 aa12.25□□□□□ -0.45
HMGN1-203ENST00000380748 NUTF2P61970 127 aaKnown RBP12.25□□□□□ -0.45
HMGN1-203ENST00000380748 DHRS2Q13268 280 aa12.25□□□□□ -0.45
HMGN1-203ENST00000380748 TPRA1Q86W33 373 aa12.25□□□□□ -0.45
HMGN1-203ENST00000380748 MGLLQ99685 303 aa12.25□□□□□ -0.45
HMGN1-203ENST00000380748 SCN3BQ9NY72 215 aa12.25□□□□□ -0.45
HMGN1-203ENST00000380748 FKBP11Q9NYL4 201 aa12.25□□□□□ -0.45
HMGN1-203ENST00000380748 HELTA6NFD8 242 aa12.24□□□□□ -0.45
HMGN1-203ENST00000380748 CRYBB3P26998 211 aa12.24□□□□□ -0.45
HMGN1-203ENST00000380748 HOGA1Q86XE5 327 aa12.24□□□□□ -0.45
HMGN1-203ENST00000380748 CADM3Q8N126 398 aa12.24□□□□□ -0.45
HMGN1-203ENST00000380748 METTL26Q96S19 204 aa12.24□□□□□ -0.45
HMGN1-203ENST00000380748 VPS13BQ7Z7G8 4022 aa12.24□□□□□ -0.45
HMGN1-203ENST00000380748 IGHV3OR16-12A0A075B7B8 117 aa12.23□□□□□ -0.45
HMGN1-203ENST00000380748 H3BMM0 161 aa12.23□□□□□ -0.45
HMGN1-203ENST00000380748 PGLYRP1O75594 196 aaPredicted RBP12.23□□□□□ -0.45
HMGN1-203ENST00000380748 TMEM50AO95807 157 aa12.23□□□□□ -0.45
HMGN1-203ENST00000380748 KRTAP10-2P60368 255 aa12.23□□□□□ -0.45
HMGN1-203ENST00000380748 TSPAN14Q8NG11 270 aa12.23□□□□□ -0.45
HMGN1-203ENST00000380748 ZNRF2Q8NHG8 242 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms