RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 TMEM101Q96IK0 257 aa14.32□□□□□ -0.12
COL4A3BP-203ENST00000380494 SPANXA1Q9NS26 97 aa14.32□□□□□ -0.12
COL4A3BP-203ENST00000380494 TNFRSF18Q9Y5U5 241 aa14.32□□□□□ -0.12
COL4A3BP-203ENST00000380494 TRPM6Q9BX84 2022 aa14.32□□□□□ -0.12
COL4A3BP-203ENST00000380494 TCRBV4S1A1TA0A5B7 111 aa14.32□□□□□ -0.12
COL4A3BP-203ENST00000380494 SUPT4H1P63272 117 aaKnown RBP14.32□□□□□ -0.12
COL4A3BP-203ENST00000380494 PVRIGQ6DKI7 326 aa14.32□□□□□ -0.12
COL4A3BP-203ENST00000380494 OR13C6PQ8NH95 151 aa14.32□□□□□ -0.12
COL4A3BP-203ENST00000380494 IQCF6A8MYZ5 107 aa14.32□□□□□ -0.12
COL4A3BP-203ENST00000380494 ADCYAP1P18509 176 aa14.32□□□□□ -0.12
COL4A3BP-203ENST00000380494 IGHV3-48P01763 117 aa14.32□□□□□ -0.12
COL4A3BP-203ENST00000380494 TMEM95Q3KNT9 176 aa14.32□□□□□ -0.12
COL4A3BP-203ENST00000380494 Q6ZT83 130 aa14.32□□□□□ -0.12
COL4A3BP-203ENST00000380494 CHTOPQ9Y3Y2 248 aaKnown RBP14.32□□□□□ -0.12
COL4A3BP-203ENST00000380494 A8MWP6 167 aa14.31□□□□□ -0.12
COL4A3BP-203ENST00000380494 M0R381 172 aa14.31□□□□□ -0.12
COL4A3BP-203ENST00000380494 IGHV2-70P01814 119 aa14.31□□□□□ -0.12
COL4A3BP-203ENST00000380494 IFI27L1Q96BM0 104 aa14.31□□□□□ -0.12
COL4A3BP-203ENST00000380494 IGKV3D-15A0A087WSY6 115 aa14.31□□□□□ -0.12
COL4A3BP-203ENST00000380494 FABP5P3A8MUU1 101 aa14.31□□□□□ -0.12
COL4A3BP-203ENST00000380494 IGKV3-15P01624 115 aa14.31□□□□□ -0.12
COL4A3BP-203ENST00000380494 SMRP1Q8NCR6 262 aa14.31□□□□□ -0.12
COL4A3BP-203ENST00000380494 C1orf162Q8NEQ5 155 aaPredicted RBP14.31□□□□□ -0.12
COL4A3BP-203ENST00000380494 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.31□□□□□ -0.12
COL4A3BP-203ENST00000380494 A0A1B0GWJ7 208 aa14.31□□□□□ -0.12
COL4A3BP-203ENST00000380494 GNG5P63218 68 aa14.31□□□□□ -0.12
COL4A3BP-203ENST00000380494 MST1P26927 711 aa14.31□□□□□ -0.12
COL4A3BP-203ENST00000380494 ITGB1BP1O14713 200 aa14.3□□□□□ -0.12
COL4A3BP-203ENST00000380494 MRPS18CQ9Y3D5 142 aaKnown RBP14.3□□□□□ -0.12
COL4A3BP-203ENST00000380494 GAGE2BQ13066 116 aa14.3□□□□□ -0.12
COL4A3BP-203ENST00000380494 GAGE2EQ4V326 116 aa14.3□□□□□ -0.12
COL4A3BP-203ENST00000380494 GAGE2DQ9UEU5 116 aa14.3□□□□□ -0.12
COL4A3BP-203ENST00000380494 FOXA2Q9Y261 457 aaPredicted RBP14.3□□□□□ -0.12
COL4A3BP-203ENST00000380494 ZNRF1Q8ND25 227 aa14.3□□□□□ -0.12
COL4A3BP-203ENST00000380494 FGF11Q92914 225 aa14.3□□□□□ -0.12
COL4A3BP-203ENST00000380494 SLC25A48Q6ZT89 311 aaKnown RBP14.3□□□□□ -0.12
COL4A3BP-203ENST00000380494 TGFAP01135 160 aa14.3□□□□□ -0.12
COL4A3BP-203ENST00000380494 PAX2Q02962 417 aa14.3□□□□□ -0.12
COL4A3BP-203ENST00000380494 NUP37Q8NFH4 326 aa14.3□□□□□ -0.12
COL4A3BP-203ENST00000380494 CD5LO43866 347 aa14.29□□□□□ -0.12
COL4A3BP-203ENST00000380494 GHRHP01286 108 aa14.29□□□□□ -0.12
COL4A3BP-203ENST00000380494 CD55P08174 381 aa14.29□□□□□ -0.12
COL4A3BP-203ENST00000380494 SLC50A1Q9BRV3 221 aa14.29□□□□□ -0.12
COL4A3BP-203ENST00000380494 F2Z2F3 143 aa14.29□□□□□ -0.12
COL4A3BP-203ENST00000380494 IGHV4-39P01824 125 aa14.29□□□□□ -0.12
COL4A3BP-203ENST00000380494 PRCDQ00LT1 54 aa14.29□□□□□ -0.12
COL4A3BP-203ENST00000380494 LINC00312Q9Y6C7 94 aa14.29□□□□□ -0.12
COL4A3BP-203ENST00000380494 LOC105371242A0A075B767 164 aa14.29□□□□□ -0.12
COL4A3BP-203ENST00000380494 C20orf144Q9BQM9 153 aa14.29□□□□□ -0.12
COL4A3BP-203ENST00000380494 C21orf62Q9NYP8 219 aa14.29□□□□□ -0.12
COL4A3BP-203ENST00000380494 TGFBR3LH3BV60 316 aa14.28□□□□□ -0.12
COL4A3BP-203ENST00000380494 C11orf68Q9H3H3 251 aaKnown RBP14.28□□□□□ -0.12
COL4A3BP-203ENST00000380494 ZNF71Q9NQZ8 489 aaPredicted RBP14.28□□□□□ -0.12
COL4A3BP-203ENST00000380494 GATA2P23769 480 aaPredicted RBP14.28□□□□□ -0.12
COL4A3BP-203ENST00000380494 COX11Q9Y6N1 276 aa14.28□□□□□ -0.12
COL4A3BP-203ENST00000380494 SCN3AQ9NY46 2000 aa14.28□□□□□ -0.12
COL4A3BP-203ENST00000380494 SAA1P0DJI8 122 aaPredicted RBP14.28□□□□□ -0.12
COL4A3BP-203ENST00000380494 GLRXP35754 106 aa14.28□□□□□ -0.12
COL4A3BP-203ENST00000380494 TPTE2P1Q5T6R2 138 aa14.28□□□□□ -0.12
COL4A3BP-203ENST00000380494 MAFAQ8NHW3 353 aaPredicted RBP14.28□□□□□ -0.12
COL4A3BP-203ENST00000380494 SEMA5BQ9P283 1151 aa14.28□□□□□ -0.12
COL4A3BP-203ENST00000380494 MCM3APO60318 1980 aa14.28□□□□□ -0.12
COL4A3BP-203ENST00000380494 A0A087WV48 116 aa14.28□□□□□ -0.12
COL4A3BP-203ENST00000380494 CD69Q07108 199 aa14.28□□□□□ -0.12
COL4A3BP-203ENST00000380494 SLC25A45Q8N413 288 aa14.28□□□□□ -0.12
COL4A3BP-203ENST00000380494 MRPL20Q9BYC9 149 aaKnown RBP14.28□□□□□ -0.12
COL4A3BP-203ENST00000380494 ZNF815PA8K554 130 aa14.27□□□□□ -0.12
COL4A3BP-203ENST00000380494 LOXL4Q96JB6 756 aa14.27□□□□□ -0.12
COL4A3BP-203ENST00000380494 DEPPQ9NTK1 212 aa14.27□□□□□ -0.12
COL4A3BP-203ENST00000380494 PSG8Q9UQ74 426 aa14.27□□□□□ -0.12
COL4A3BP-203ENST00000380494 IGKV1D-8A0A087WSZ0 117 aa14.27□□□□□ -0.12
COL4A3BP-203ENST00000380494 C3orf79P0CE67 100 aa14.27□□□□□ -0.12
COL4A3BP-203ENST00000380494 CNTFRP26992 372 aa14.27□□□□□ -0.12
COL4A3BP-203ENST00000380494 RAMP3O60896 148 aa14.27□□□□□ -0.13
COL4A3BP-203ENST00000380494 TMEM171Q8WVE6 324 aa14.27□□□□□ -0.13
COL4A3BP-203ENST00000380494 DUX5Q96PT3 197 aa14.27□□□□□ -0.13
COL4A3BP-203ENST00000380494 SAA2-SAA4A0A096LPE2 208 aa14.27□□□□□ -0.13
COL4A3BP-203ENST00000380494 SAA2P0DJI9 122 aaPredicted RBP14.27□□□□□ -0.13
COL4A3BP-203ENST00000380494 FAM166AQ6J272 317 aa14.27□□□□□ -0.13
COL4A3BP-203ENST00000380494 TMEM256Q8N2U0 113 aa14.27□□□□□ -0.13
COL4A3BP-203ENST00000380494 IGLV3-32A0A0A0MS00 114 aa14.26□□□□□ -0.13
COL4A3BP-203ENST00000380494 TREML4Q6UXN2 200 aa14.26□□□□□ -0.13
COL4A3BP-203ENST00000380494 EREGO14944 169 aa14.26□□□□□ -0.13
COL4A3BP-203ENST00000380494 ZNF638Q14966 1978 aaKnown RBP14.26□□□□□ -0.13
COL4A3BP-203ENST00000380494 NMSQ5H8A3 153 aa14.26□□□□□ -0.13
COL4A3BP-203ENST00000380494 RNF182Q8N6D2 247 aa14.26□□□□□ -0.13
COL4A3BP-203ENST00000380494 OR10W1Q8NGF6 305 aa14.26□□□□□ -0.13
COL4A3BP-203ENST00000380494 VKORC1Q9BQB6 163 aa14.26□□□□□ -0.13
COL4A3BP-203ENST00000380494 ATXN8Q156A1 80 aa14.26□□□□□ -0.13
COL4A3BP-203ENST00000380494 WBP1Q96G27 269 aa14.26□□□□□ -0.13
COL4A3BP-203ENST00000380494 GBF1Q92538 1859 aa14.26□□□□□ -0.13
COL4A3BP-203ENST00000380494 RALGAPA2Q2PPJ7 1873 aa14.26□□□□□ -0.13
COL4A3BP-203ENST00000380494 IFI27P40305 119 aaPredicted RBP14.26□□□□□ -0.13
COL4A3BP-203ENST00000380494 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.25□□□□□ -0.13
COL4A3BP-203ENST00000380494 RPRMLQ8N4K4 120 aa14.25□□□□□ -0.13
COL4A3BP-203ENST00000380494 FBXL7Q9UJT9 491 aa14.25□□□□□ -0.13
COL4A3BP-203ENST00000380494 LRRC37AA6NMS7 1700 aa14.25□□□□□ -0.13
COL4A3BP-203ENST00000380494 OR9G9P0C7N8 305 aa14.25□□□□□ -0.13
COL4A3BP-203ENST00000380494 SSBP2P81877 361 aaPredicted RBP14.25□□□□□ -0.13
COL4A3BP-203ENST00000380494 MORN2Q502X0 79 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms