RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 AKAIN1P0CW23 69 aa18.5■□□□□ 0.55
TNFRSF4-201ENST00000379236 HOXA1P49639 335 aaPredicted RBP18.5■□□□□ 0.55
TNFRSF4-201ENST00000379236 LINC00322Q6ZN03 302 aaPredicted RBP18.5■□□□□ 0.55
TNFRSF4-201ENST00000379236 DYNC2LI1Q8TCX1 351 aa18.5■□□□□ 0.55
TNFRSF4-201ENST00000379236 TXN2Q99757 166 aa18.5■□□□□ 0.55
TNFRSF4-201ENST00000379236 C5orf66Q9H5L9 145 aa18.5■□□□□ 0.55
TNFRSF4-201ENST00000379236 RETNQ9HD89 108 aa18.5■□□□□ 0.55
TNFRSF4-201ENST00000379236 IGHV3OR16-8A0A075B7F1 116 aa18.49■□□□□ 0.55
TNFRSF4-201ENST00000379236 TEX13DA0A0J9YY54 714 aaPredicted RBP18.49■□□□□ 0.55
TNFRSF4-201ENST00000379236 RBMY1BA6NDE4 496 aaKnown RBP18.49■□□□□ 0.55
TNFRSF4-201ENST00000379236 RBMY1EA6NEQ0 496 aaKnown RBP18.49■□□□□ 0.55
TNFRSF4-201ENST00000379236 GNG7O60262 68 aa18.49■□□□□ 0.55
TNFRSF4-201ENST00000379236 YIF1AO95070 293 aa18.49■□□□□ 0.55
TNFRSF4-201ENST00000379236 RBMY1DP0C7P1 496 aaKnown RBP18.49■□□□□ 0.55
TNFRSF4-201ENST00000379236 RPL5P46777 297 aaKnown RBP18.49■□□□□ 0.55
TNFRSF4-201ENST00000379236 SPAG8Q99932 426 aaPredicted RBP18.49■□□□□ 0.55
TNFRSF4-201ENST00000379236 F8W735 103 aaPredicted RBP18.48■□□□□ 0.55
TNFRSF4-201ENST00000379236 I3L2K1 104 aa18.48■□□□□ 0.55
TNFRSF4-201ENST00000379236 K7EMT4 169 aa18.48■□□□□ 0.55
TNFRSF4-201ENST00000379236 CTDSPLO15194 276 aa18.48■□□□□ 0.55
TNFRSF4-201ENST00000379236 ST8SIA3O43173 380 aa18.48■□□□□ 0.55
TNFRSF4-201ENST00000379236 ZNF207O43670 478 aaKnown RBP18.48■□□□□ 0.55
TNFRSF4-201ENST00000379236 UCP1P25874 307 aa18.48■□□□□ 0.55
TNFRSF4-201ENST00000379236 ADMP35318 185 aa18.48■□□□□ 0.55
TNFRSF4-201ENST00000379236 SUB1P53999 127 aaKnown RBP eCLIP18.48■□□□□ 0.55
TNFRSF4-201ENST00000379236 HIPK2Q9H2X6 1198 aa18.48■□□□□ 0.55
TNFRSF4-201ENST00000379236 EDA2RQ9HAV5 297 aa18.48■□□□□ 0.55
TNFRSF4-201ENST00000379236 C15orf62A8K5M9 175 aa18.47■□□□□ 0.55
TNFRSF4-201ENST00000379236 IGHV3-48P01763 117 aa18.47■□□□□ 0.55
TNFRSF4-201ENST00000379236 CTSGP08311 255 aa18.47■□□□□ 0.55
TNFRSF4-201ENST00000379236 SURF2Q15527 256 aaPredicted RBP18.47■□□□□ 0.55
TNFRSF4-201ENST00000379236 ZFAND6Q6FIF0 208 aa18.47■□□□□ 0.55
TNFRSF4-201ENST00000379236 OR4C16Q8NGL9 310 aa18.47■□□□□ 0.55
TNFRSF4-201ENST00000379236 PRRT1Q99946 306 aa18.47■□□□□ 0.55
TNFRSF4-201ENST00000379236 FAM110AQ9BQ89 295 aa18.47■□□□□ 0.55
TNFRSF4-201ENST00000379236 RSL24D1Q9UHA3 163 aaKnown RBP18.47■□□□□ 0.55
TNFRSF4-201ENST00000379236 A0A0B4J293 547 aa18.46■□□□□ 0.55
TNFRSF4-201ENST00000379236 OR5AC1P0C628 307 aa18.46■□□□□ 0.55
TNFRSF4-201ENST00000379236 FCGR2BP31994 310 aaPredicted RBP18.46■□□□□ 0.55
TNFRSF4-201ENST00000379236 DUSP18Q8NEJ0 188 aa18.46■□□□□ 0.55
TNFRSF4-201ENST00000379236 GGTLC1Q9BX51 225 aa18.46■□□□□ 0.55
TNFRSF4-201ENST00000379236 RYR3Q15413 4870 aa18.45■□□□□ 0.54
TNFRSF4-201ENST00000379236 LOC102724200A0A096LPH7 203 aaPredicted RBP18.45■□□□□ 0.54
TNFRSF4-201ENST00000379236 CORTO00230 105 aa18.45■□□□□ 0.54
TNFRSF4-201ENST00000379236 TSPAN4O14817 238 aa18.45■□□□□ 0.54
TNFRSF4-201ENST00000379236 P0C879 139 aa18.45■□□□□ 0.54
TNFRSF4-201ENST00000379236 NPBWR1P48145 328 aa18.45■□□□□ 0.54
TNFRSF4-201ENST00000379236 FAM219AQ8IW50 185 aa18.45■□□□□ 0.54
TNFRSF4-201ENST00000379236 TMEM222Q9H0R3 208 aa18.45■□□□□ 0.54
TNFRSF4-201ENST00000379236 NAA60Q9H7X0 242 aa18.45■□□□□ 0.54
TNFRSF4-201ENST00000379236 OR4C46A6NHA9 309 aa18.44■□□□□ 0.54
TNFRSF4-201ENST00000379236 H3BMQ9 156 aa18.44■□□□□ 0.54
TNFRSF4-201ENST00000379236 ETV6P41212 452 aa18.44■□□□□ 0.54
TNFRSF4-201ENST00000379236 DHODHQ02127 395 aa18.44■□□□□ 0.54
TNFRSF4-201ENST00000379236 NXF2Q9GZY0 626 aaKnown RBP18.44■□□□□ 0.54
TNFRSF4-201ENST00000379236 UBQLN2Q9UHD9 624 aa18.44■□□□□ 0.54
TNFRSF4-201ENST00000379236 SCP2D1Q9UJQ7 156 aa18.44■□□□□ 0.54
TNFRSF4-201ENST00000379236 TMEM116Q8NCL8 245 aa18.43■□□□□ 0.54
TNFRSF4-201ENST00000379236 OR51S1Q8NGJ8 323 aa18.43■□□□□ 0.54
TNFRSF4-201ENST00000379236 MCFD2Q8NI22 146 aa18.43■□□□□ 0.54
TNFRSF4-201ENST00000379236 RBPMSQ93062 196 aaKnown RBP18.43■□□□□ 0.54
TNFRSF4-201ENST00000379236 GINS3Q9BRX5 216 aa18.43■□□□□ 0.54
TNFRSF4-201ENST00000379236 RTBDNQ9BSG5 229 aaPredicted RBP18.43■□□□□ 0.54
TNFRSF4-201ENST00000379236 MCUBQ9NWR8 336 aa18.43■□□□□ 0.54
TNFRSF4-201ENST00000379236 IGHV7-4-1A0A0J9YVY3 117 aa18.42■□□□□ 0.54
TNFRSF4-201ENST00000379236 FABP12A6NFH5 140 aa18.42■□□□□ 0.54
TNFRSF4-201ENST00000379236 CCDC160A6NGH7 325 aa18.42■□□□□ 0.54
TNFRSF4-201ENST00000379236 INS-IGF2F8WCM5 200 aa18.42■□□□□ 0.54
TNFRSF4-201ENST00000379236 GSTZ1O43708 216 aaPredicted RBP18.42■□□□□ 0.54
TNFRSF4-201ENST00000379236 SCGB2A1O75556 95 aa18.42■□□□□ 0.54
TNFRSF4-201ENST00000379236 CDS2O95674 445 aa18.42■□□□□ 0.54
TNFRSF4-201ENST00000379236 BMI1P35226 326 aa18.42■□□□□ 0.54
TNFRSF4-201ENST00000379236 SCGB3A2Q96PL1 93 aa18.42■□□□□ 0.54
TNFRSF4-201ENST00000379236 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.42■□□□□ 0.54
TNFRSF4-201ENST00000379236 SMPXQ9UHP9 88 aa18.42■□□□□ 0.54
TNFRSF4-201ENST00000379236 TRAV14DV4A0A0A6YYC5 116 aa18.41■□□□□ 0.54
TNFRSF4-201ENST00000379236 A0A0G2JRQ6 117 aa18.41■□□□□ 0.54
TNFRSF4-201ENST00000379236 ANKRD20A5PA0PJZ0 165 aa18.41■□□□□ 0.54
TNFRSF4-201ENST00000379236 TMEM268Q5VZI3 342 aa18.41■□□□□ 0.54
TNFRSF4-201ENST00000379236 IL17DQ8TAD2 202 aa18.41■□□□□ 0.54
TNFRSF4-201ENST00000379236 RHPN1-AS1Q9BWJ2 59 aa18.41■□□□□ 0.54
TNFRSF4-201ENST00000379236 SLIRPQ9GZT3 109 aaKnown RBP18.41■□□□□ 0.54
TNFRSF4-201ENST00000379236 GPR132Q9UNW8 380 aa18.41■□□□□ 0.54
TNFRSF4-201ENST00000379236 KCNIP3Q9Y2W7 256 aa18.41■□□□□ 0.54
TNFRSF4-201ENST00000379236 CRYM-AS1A6NIL9 109 aa18.4■□□□□ 0.54
TNFRSF4-201ENST00000379236 RNASE2P10153 161 aaKnown RBP18.4■□□□□ 0.54
TNFRSF4-201ENST00000379236 OPRK1P41145 380 aa18.4■□□□□ 0.54
TNFRSF4-201ENST00000379236 SPCS3P61009 180 aa18.4■□□□□ 0.54
TNFRSF4-201ENST00000379236 GLYATL2Q8WU03 294 aa18.4■□□□□ 0.54
TNFRSF4-201ENST00000379236 OR10C1Q96KK4 312 aa18.4■□□□□ 0.54
TNFRSF4-201ENST00000379236 IGHV3-49A0A0A0MS15 119 aa18.39■□□□□ 0.53
TNFRSF4-201ENST00000379236 CHEK1O14757 476 aa18.39■□□□□ 0.53
TNFRSF4-201ENST00000379236 TNFSF8P32971 234 aa18.39■□□□□ 0.53
TNFRSF4-201ENST00000379236 APOC4P55056 127 aa18.39■□□□□ 0.53
TNFRSF4-201ENST00000379236 SELENOHQ8IZQ5 122 aaKnown RBP18.39■□□□□ 0.53
TNFRSF4-201ENST00000379236 CACNG5Q9UF02 275 aa18.39■□□□□ 0.53
TNFRSF4-201ENST00000379236 FAUP35544 74 aaKnown RBP18.38■□□□□ 0.53
TNFRSF4-201ENST00000379236 ZNF600Q6ZNG1 722 aa18.38■□□□□ 0.53
TNFRSF4-201ENST00000379236 LHFPL5Q8TAF8 219 aa18.38■□□□□ 0.53
TNFRSF4-201ENST00000379236 RNF2Q99496 336 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms