RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 LPCAT3Q6P1A2 487 aa12.78□□□□□ -0.36
HLA-A-201ENST00000376802 H2BFWTQ7Z2G1 175 aa12.78□□□□□ -0.36
HLA-A-201ENST00000376802 AGRNO00468 2067 aa12.78□□□□□ -0.36
HLA-A-201ENST00000376802 APOHP02749 345 aaPredicted RBP12.77□□□□□ -0.37
HLA-A-201ENST00000376802 NANOS2P60321 138 aaKnown RBP12.77□□□□□ -0.37
HLA-A-201ENST00000376802 HSPE1P61604 102 aaKnown RBP12.77□□□□□ -0.37
HLA-A-201ENST00000376802 LSM3P62310 102 aaKnown RBP12.77□□□□□ -0.37
HLA-A-201ENST00000376802 IZUMO4Q1ZYL8 232 aa12.77□□□□□ -0.37
HLA-A-201ENST00000376802 TOMM20LQ6UXN7 152 aa12.77□□□□□ -0.37
HLA-A-201ENST00000376802 OR4A16Q8NH70 328 aa12.77□□□□□ -0.37
HLA-A-201ENST00000376802 ST8SIA2Q92186 375 aa12.77□□□□□ -0.37
HLA-A-201ENST00000376802 MRGPRFQ96AM1 343 aa12.77□□□□□ -0.37
HLA-A-201ENST00000376802 VSIRQ9H7M9 311 aa12.77□□□□□ -0.37
HLA-A-201ENST00000376802 UCP3P55916 312 aa12.76□□□□□ -0.37
HLA-A-201ENST00000376802 TSPAN5P62079 268 aa12.76□□□□□ -0.37
HLA-A-201ENST00000376802 TCF24Q7RTU0 167 aa12.76□□□□□ -0.37
HLA-A-201ENST00000376802 OR11H2Q8NH07 326 aa12.76□□□□□ -0.37
HLA-A-201ENST00000376802 C11orf68Q9H3H3 251 aaKnown RBP12.76□□□□□ -0.37
HLA-A-201ENST00000376802 GNG7O60262 68 aa12.75□□□□□ -0.37
HLA-A-201ENST00000376802 SPINK9Q5DT21 86 aa12.75□□□□□ -0.37
HLA-A-201ENST00000376802 FAM24BQ8N5W8 94 aa12.75□□□□□ -0.37
HLA-A-201ENST00000376802 PINX1Q96BK5 328 aaKnown RBP12.75□□□□□ -0.37
HLA-A-201ENST00000376802 CMTM3Q96MX0 182 aa12.75□□□□□ -0.37
HLA-A-201ENST00000376802 MS4A6AQ9H2W1 248 aa12.75□□□□□ -0.37
HLA-A-201ENST00000376802 ZFAND3Q9H8U3 227 aa12.75□□□□□ -0.37
HLA-A-201ENST00000376802 P0C879 139 aa12.74□□□□□ -0.37
HLA-A-201ENST00000376802 S100GP29377 79 aa12.74□□□□□ -0.37
HLA-A-201ENST00000376802 PVRIGQ6DKI7 326 aa12.74□□□□□ -0.37
HLA-A-201ENST00000376802 C11orf45Q8TAV5 145 aa12.74□□□□□ -0.37
HLA-A-201ENST00000376802 SCPEP1Q9HB40 452 aa12.74□□□□□ -0.37
HLA-A-201ENST00000376802 DNAH10Q8IVF4 4471 aa12.73□□□□□ -0.37
HLA-A-201ENST00000376802 A0A0B4J293 547 aa12.73□□□□□ -0.37
HLA-A-201ENST00000376802 IGHV3-66A0A0C4DH42 116 aa12.73□□□□□ -0.37
HLA-A-201ENST00000376802 DEFB4AO15263 64 aa12.73□□□□□ -0.37
HLA-A-201ENST00000376802 ST8SIA3O43173 380 aa12.73□□□□□ -0.37
HLA-A-201ENST00000376802 DFFBO76075 338 aa12.73□□□□□ -0.37
HLA-A-201ENST00000376802 CA1P00915 261 aaPredicted RBP12.73□□□□□ -0.37
HLA-A-201ENST00000376802 IGKV1-5P01602 117 aa12.73□□□□□ -0.37
HLA-A-201ENST00000376802 APOA1P02647 267 aa12.73□□□□□ -0.37
HLA-A-201ENST00000376802 CD5P06127 495 aa12.73□□□□□ -0.37
HLA-A-201ENST00000376802 RCVRNP35243 200 aa12.73□□□□□ -0.37
HLA-A-201ENST00000376802 PAFAH1B2P68402 229 aa12.73□□□□□ -0.37
HLA-A-201ENST00000376802 ERHP84090 104 aaKnown RBP12.73□□□□□ -0.37
HLA-A-201ENST00000376802 PRR20EP86478 221 aa12.73□□□□□ -0.37
HLA-A-201ENST00000376802 PRR20CP86479 221 aa12.73□□□□□ -0.37
HLA-A-201ENST00000376802 PRR20DP86480 221 aa12.73□□□□□ -0.37
HLA-A-201ENST00000376802 PRR20BP86481 221 aa12.73□□□□□ -0.37
HLA-A-201ENST00000376802 PRR20AP86496 221 aa12.73□□□□□ -0.37
HLA-A-201ENST00000376802 RBMS2Q15434 407 aaKnown RBP12.73□□□□□ -0.37
HLA-A-201ENST00000376802 SNX29P2Q8IUI4 249 aa12.73□□□□□ -0.37
HLA-A-201ENST00000376802 COMMD3Q9UBI1 195 aa12.73□□□□□ -0.37
HLA-A-201ENST00000376802 PUS1Q9Y606 427 aaKnown RBP eCLIP12.73□□□□□ -0.37
HLA-A-201ENST00000376802 A0A1B0GU03 582 aa12.72□□□□□ -0.37
HLA-A-201ENST00000376802 INS-IGF2F8WCM5 200 aa12.72□□□□□ -0.37
HLA-A-201ENST00000376802 TMEM50AO95807 157 aa12.72□□□□□ -0.37
HLA-A-201ENST00000376802 NPBWR1P48145 328 aa12.72□□□□□ -0.37
HLA-A-201ENST00000376802 DEFB131AP59861 70 aa12.72□□□□□ -0.37
HLA-A-201ENST00000376802 LEMD1Q68G75 181 aa12.72□□□□□ -0.37
HLA-A-201ENST00000376802 GINS3Q9BRX5 216 aa12.72□□□□□ -0.37
HLA-A-201ENST00000376802 MFFQ9GZY8 342 aa12.72□□□□□ -0.37
HLA-A-201ENST00000376802 FBXL17Q9UF56 701 aa12.72□□□□□ -0.37
HLA-A-201ENST00000376802 TRAV2A0A0B4J234 112 aa12.71□□□□□ -0.37
HLA-A-201ENST00000376802 SMIM31A0A1B0GVY4 71 aa12.71□□□□□ -0.37
HLA-A-201ENST00000376802 M0QYG6 137 aa12.71□□□□□ -0.37
HLA-A-201ENST00000376802 GIG44P09565 113 aaPredicted RBP12.71□□□□□ -0.37
HLA-A-201ENST00000376802 ELK1P19419 428 aa12.71□□□□□ -0.37
HLA-A-201ENST00000376802 PI3P19957 117 aa12.71□□□□□ -0.37
HLA-A-201ENST00000376802 RND3P61587 244 aa12.71□□□□□ -0.37
HLA-A-201ENST00000376802 ZNF600Q6ZNG1 722 aa12.71□□□□□ -0.37
HLA-A-201ENST00000376802 DUSP18Q8NEJ0 188 aa12.71□□□□□ -0.37
HLA-A-201ENST00000376802 TP53RKQ96S44 253 aa12.71□□□□□ -0.37
HLA-A-201ENST00000376802 MRPL36Q9P0J6 103 aaKnown RBP12.71□□□□□ -0.37
HLA-A-201ENST00000376802 DNASE2O00115 360 aaPredicted RBP12.7□□□□□ -0.38
HLA-A-201ENST00000376802 RNASE2P10153 161 aaKnown RBP12.7□□□□□ -0.38
HLA-A-201ENST00000376802 NCS1P62166 190 aa12.7□□□□□ -0.38
HLA-A-201ENST00000376802 TMEM187Q14656 261 aa12.7□□□□□ -0.38
HLA-A-201ENST00000376802 MLANAQ16655 118 aa12.7□□□□□ -0.38
HLA-A-201ENST00000376802 LHFPL1Q86WI0 220 aa12.7□□□□□ -0.38
HLA-A-201ENST00000376802 Q8NAQ8 132 aa12.7□□□□□ -0.38
HLA-A-201ENST00000376802 FNDC4Q9H6D8 234 aaPredicted RBP12.7□□□□□ -0.38
HLA-A-201ENST00000376802 HECTD4Q9Y4D8 3996 aa12.7□□□□□ -0.38
HLA-A-201ENST00000376802 VPS13DQ5THJ4 4388 aa12.7□□□□□ -0.38
HLA-A-201ENST00000376802 A0A087WXM4 84 aa12.69□□□□□ -0.38
HLA-A-201ENST00000376802 HPGDSO60760 199 aa12.69□□□□□ -0.38
HLA-A-201ENST00000376802 IFNA4P05014 189 aa12.69□□□□□ -0.38
HLA-A-201ENST00000376802 SMIM18P0DKX4 95 aa12.69□□□□□ -0.38
HLA-A-201ENST00000376802 SNCAP37840 140 aa12.69□□□□□ -0.38
HLA-A-201ENST00000376802 RPL11P62913 178 aaKnown RBP12.69□□□□□ -0.38
HLA-A-201ENST00000376802 C2CD4CQ8TF44 421 aa12.69□□□□□ -0.38
HLA-A-201ENST00000376802 ZNF486Q96H40 463 aaPredicted RBP12.69□□□□□ -0.38
HLA-A-201ENST00000376802 MRPS26Q9BYN8 205 aaKnown RBP12.69□□□□□ -0.38
HLA-A-201ENST00000376802 KLK11Q9UBX7 282 aa12.69□□□□□ -0.38
HLA-A-201ENST00000376802 HERC2O95714 4834 aa12.69□□□□□ -0.38
HLA-A-201ENST00000376802 ETV6P41212 452 aa12.68□□□□□ -0.38
HLA-A-201ENST00000376802 PIGPP57054 158 aa12.68□□□□□ -0.38
HLA-A-201ENST00000376802 VBP1P61758 197 aa12.68□□□□□ -0.38
HLA-A-201ENST00000376802 TRPT1Q86TN4 253 aaKnown RBP12.68□□□□□ -0.38
HLA-A-201ENST00000376802 SLC35G3Q8N808 338 aa12.68□□□□□ -0.38
HLA-A-201ENST00000376802 APLNQ9ULZ1 77 aa12.68□□□□□ -0.38
HLA-A-201ENST00000376802 A0A0G2JRQ6 117 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms