RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 A0A1B0GUT8 65 aa12.9□□□□□ -0.34
SRPK1-204ENST00000373825 TMEM164Q5U3C3 297 aa12.9□□□□□ -0.34
SRPK1-204ENST00000373825 ZGRF1Q86YA3 2104 aa12.9□□□□□ -0.34
SRPK1-204ENST00000373825 SNRNP40Q96DI7 357 aaKnown RBP12.9□□□□□ -0.34
SRPK1-204ENST00000373825 TRAV8-1A0A0A6YYK1 113 aa12.9□□□□□ -0.34
SRPK1-204ENST00000373825 ARPC1AQ92747 370 aa12.9□□□□□ -0.34
SRPK1-204ENST00000373825 CACNA1EQ15878 2313 aa12.9□□□□□ -0.34
SRPK1-204ENST00000373825 TRPM7Q96QT4 1865 aa12.9□□□□□ -0.35
SRPK1-204ENST00000373825 ZNF585BQ52M93 769 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 RPP21Q9H633 154 aaKnown RBP12.89□□□□□ -0.35
SRPK1-204ENST00000373825 J3KRW8 73 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 PRSS2P07478 247 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 PYYP10082 97 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 HOXA4Q00056 320 aaPredicted RBP12.89□□□□□ -0.35
SRPK1-204ENST00000373825 SH2D6Q7Z4S9 175 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 NUP35Q8NFH5 326 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 C1QTNF5Q9BXJ0 243 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 TMEM189A5PLL7 270 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 H3BRM9 83 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 REG1BP48304 166 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 RPL11P62913 178 aaKnown RBP12.89□□□□□ -0.35
SRPK1-204ENST00000373825 PCSK4Q6UW60 755 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 C10orf126Q8N4M7 172 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 OR9G4Q8NGQ1 327 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 BADQ92934 168 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 FAM90A10PA6NDY2 464 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 FAM90A18PA6NE21 464 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 FAM90A16PA6NEW6 464 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 FAM90A20PA6NIJ5 464 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 FAM90A8PA6NJQ4 464 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 FAM90A7PA6NKC0 464 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 FAM90A22PA8MWA6 464 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 FAM90A12PA8MX19 464 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 FAM90A5PA8MXJ8 464 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 FAM90A23PA8MXZ1 464 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 FAM90A15PP0C7V4 464 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 FAM90A13PP0C7W8 464 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 FAM90A14PP0C7W9 464 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 FAM90A24PP0C7X0 464 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 SRFP11831 508 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 RABAC1Q9UI14 185 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 PRNDQ9UKY0 176 aa12.89□□□□□ -0.35
SRPK1-204ENST00000373825 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.89□□□□□ -0.353e-8■■■□□ 15.7
SRPK1-204ENST00000373825 H3BMG7 143 aa12.88□□□□□ -0.35
SRPK1-204ENST00000373825 CT55Q8WUE5 264 aa12.88□□□□□ -0.35
SRPK1-204ENST00000373825 MAP1LC3AQ9H492 121 aa12.88□□□□□ -0.35
SRPK1-204ENST00000373825 PLSCR4Q9NRQ2 329 aa12.88□□□□□ -0.35
SRPK1-204ENST00000373825 POLR2AP24928 1970 aaKnown RBP12.88□□□□□ -0.35
SRPK1-204ENST00000373825 HSPE1P61604 102 aaKnown RBP12.88□□□□□ -0.35
SRPK1-204ENST00000373825 RBPMS2Q6ZRY4 209 aaKnown RBP12.88□□□□□ -0.35
SRPK1-204ENST00000373825 NPIPB3Q92617 1050 aa12.88□□□□□ -0.35
SRPK1-204ENST00000373825 HARBI1Q96MB7 349 aa12.88□□□□□ -0.35
SRPK1-204ENST00000373825 C1orf147Q96MC9 270 aaPredicted RBP12.88□□□□□ -0.35
SRPK1-204ENST00000373825 IGKV1-27A0A075B6S5 117 aa12.88□□□□□ -0.35
SRPK1-204ENST00000373825 MMP23AO75900 390 aa12.88□□□□□ -0.35
SRPK1-204ENST00000373825 INO80CQ6PI98 192 aaPredicted RBP12.88□□□□□ -0.35
SRPK1-204ENST00000373825 USF3Q68DE3 2245 aa12.88□□□□□ -0.35
SRPK1-204ENST00000373825 NDUFA3O95167 84 aa12.88□□□□□ -0.35
SRPK1-204ENST00000373825 TOMM40O96008 361 aa12.88□□□□□ -0.35
SRPK1-204ENST00000373825 FRMD6-AS1P0C7T7 363 aa12.88□□□□□ -0.35
SRPK1-204ENST00000373825 CCL3P10147 92 aa12.88□□□□□ -0.35
SRPK1-204ENST00000373825 HCP5Q6MZN7 132 aa12.88□□□□□ -0.35
SRPK1-204ENST00000373825 GTSCR1Q86UQ5 136 aa12.88□□□□□ -0.35
SRPK1-204ENST00000373825 VSTM5A8MXK1 200 aa12.87□□□□□ -0.35
SRPK1-204ENST00000373825 TMPRSS2O15393 492 aa12.87□□□□□ -0.35
SRPK1-204ENST00000373825 TREML4Q6UXN2 200 aa12.87□□□□□ -0.35
SRPK1-204ENST00000373825 TMEM14EPQ6UXP3 125 aa12.87□□□□□ -0.35
SRPK1-204ENST00000373825 CHCHD1Q96BP2 118 aaKnown RBP12.87□□□□□ -0.35
SRPK1-204ENST00000373825 DEFB127Q9H1M4 99 aa12.87□□□□□ -0.35
SRPK1-204ENST00000373825 RALGAPA2Q2PPJ7 1873 aa12.87□□□□□ -0.35
SRPK1-204ENST00000373825 COL9A1P20849 921 aa12.87□□□□□ -0.35
SRPK1-204ENST00000373825 CFPP27918 469 aa12.87□□□□□ -0.35
SRPK1-204ENST00000373825 WDR82Q6UXN9 313 aa12.87□□□□□ -0.35
SRPK1-204ENST00000373825 GGTLC1Q9BX51 225 aa12.87□□□□□ -0.35
SRPK1-204ENST00000373825 TNRC6AQ8NDV7 1962 aaKnown RBP12.87□□□□□ -0.35
SRPK1-204ENST00000373825 SPRY3O43610 288 aa12.87□□□□□ -0.35
SRPK1-204ENST00000373825 LHFPL4Q7Z7J7 247 aa12.87□□□□□ -0.35
SRPK1-204ENST00000373825 IFI27L1Q96BM0 104 aa12.87□□□□□ -0.35
SRPK1-204ENST00000373825 HERVK_113P61574 105 aa12.86□□□□□ -0.35
SRPK1-204ENST00000373825 KLRB1Q12918 225 aa12.86□□□□□ -0.35
SRPK1-204ENST00000373825 EBLN2Q6P2I7 272 aa12.86□□□□□ -0.35
SRPK1-204ENST00000373825 KCNE4Q8WWG9 221 aa12.86□□□□□ -0.35
SRPK1-204ENST00000373825 A0A1W2PPM0 123 aa12.86□□□□□ -0.35
SRPK1-204ENST00000373825 ZNF658BQ4V348 819 aaPredicted RBP12.86□□□□□ -0.35
SRPK1-204ENST00000373825 SCRT1Q9BWW7 348 aa12.86□□□□□ -0.35
SRPK1-204ENST00000373825 MRPS17Q9Y2R5 130 aaKnown RBP12.86□□□□□ -0.35
SRPK1-204ENST00000373825 F5H697 171 aa12.86□□□□□ -0.35
SRPK1-204ENST00000373825 TUSC5Q8IXB3 177 aa12.86□□□□□ -0.35
SRPK1-204ENST00000373825 OR52E5Q8NH55 327 aa12.86□□□□□ -0.35
SRPK1-204ENST00000373825 RNF166Q96A37 237 aaPredicted RBP12.86□□□□□ -0.35
SRPK1-204ENST00000373825 K7ERJ3 54 aa12.86□□□□□ -0.35
SRPK1-204ENST00000373825 MOSP00540 346 aa12.86□□□□□ -0.35
SRPK1-204ENST00000373825 PLA2G5P39877 138 aa12.86□□□□□ -0.35
SRPK1-204ENST00000373825 ZNF785A8K8V0 405 aa12.85□□□□□ -0.35
SRPK1-204ENST00000373825 MRPS21P82921 87 aaKnown RBP12.85□□□□□ -0.35
SRPK1-204ENST00000373825 RPL39P5Q59GN2 51 aa12.85□□□□□ -0.35
SRPK1-204ENST00000373825 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.85□□□□□ -0.35
SRPK1-204ENST00000373825 TMEM95Q3KNT9 176 aa12.85□□□□□ -0.35
SRPK1-204ENST00000373825 YPEL4Q96NS1 127 aa12.85□□□□□ -0.35
SRPK1-204ENST00000373825 IL23AQ9NPF7 189 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms