RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 OR1C1Q15619 314 aa9.52□□□□□ -0.89
SMARCA1-201ENST00000371121 RNFT1Q5M7Z0 435 aa9.52□□□□□ -0.89
SMARCA1-201ENST00000371121 TEPPQ6URK8 271 aa9.52□□□□□ -0.89
SMARCA1-201ENST00000371121 CXorf67Q86X51 503 aaPredicted RBP9.52□□□□□ -0.89
SMARCA1-201ENST00000371121 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.51□□□□□ -0.89
SMARCA1-201ENST00000371121 IGHV3-13P01766 116 aa9.51□□□□□ -0.89
SMARCA1-201ENST00000371121 IGHV3-7P01780 117 aa9.51□□□□□ -0.89
SMARCA1-201ENST00000371121 PI4KAP42356 2102 aa9.51□□□□□ -0.89
SMARCA1-201ENST00000371121 GABRA2P47869 451 aa9.51□□□□□ -0.89
SMARCA1-201ENST00000371121 RPS19BP1Q86WX3 136 aaKnown RBP9.51□□□□□ -0.89
SMARCA1-201ENST00000371121 GTSF1Q8WW33 167 aa9.51□□□□□ -0.89
SMARCA1-201ENST00000371121 TAAR6Q96RI8 345 aa9.51□□□□□ -0.89
SMARCA1-201ENST00000371121 SLC25A10Q9UBX3 287 aaPredicted RBP9.51□□□□□ -0.89
SMARCA1-201ENST00000371121 MRPL33O75394 65 aaKnown RBP9.51□□□□□ -0.89
SMARCA1-201ENST00000371121 HSBP1O75506 76 aa9.51□□□□□ -0.89
SMARCA1-201ENST00000371121 ZNF138P52744 262 aa9.51□□□□□ -0.89
SMARCA1-201ENST00000371121 MFAP2P55001 183 aa9.51□□□□□ -0.89
SMARCA1-201ENST00000371121 TCF24Q7RTU0 167 aa9.51□□□□□ -0.89
SMARCA1-201ENST00000371121 HSD17B10Q99714 261 aaKnown RBP9.51□□□□□ -0.89
SMARCA1-201ENST00000371121 WDR54Q9H977 334 aa9.51□□□□□ -0.89
SMARCA1-201ENST00000371121 IDI2-AS1Q9NZ38 188 aa9.51□□□□□ -0.89
SMARCA1-201ENST00000371121 OOEPA6NGQ2 149 aa9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 CD5LO43866 347 aa9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 NCR2O95944 276 aa9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 SSBP2P81877 361 aaPredicted RBP9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 CATR1Q13166 79 aa9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 NABP2Q9BQ15 211 aa9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 FAM234AQ9H0X4 552 aa9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 TCF19Q9Y242 345 aa9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 TRGV8A0A0C4DH27 118 aa9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 FAM231BA6NCW3 169 aa9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 MGST1P10620 155 aaKnown RBP9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 RAC2P15153 192 aa9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 REG1BP48304 166 aa9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 WFDC12Q8WWY7 111 aa9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 PMCHL2Q9BQD1 86 aa9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 CLCF1Q9UBD9 225 aa9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 RPH3ALQ9UNE2 315 aa9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 FAM90A9PA6NNJ1 464 aa9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 HLA-DRB1P01911 266 aa9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 FOXA3P55318 350 aaPredicted RBP9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 PRR27Q6MZM9 219 aa9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 RASL11AQ6T310 242 aa9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 NEGR1Q7Z3B1 354 aa9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 FER1L6-AS1Q8NA97 138 aa9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 HEYLQ9NQ87 328 aaPredicted RBP9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 TMEM140Q9NV12 185 aa9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 PCNX2A6NKB5 2137 aa9.5□□□□□ -0.89
SMARCA1-201ENST00000371121 TMEM30CPA0ZSE6 113 aa9.49□□□□□ -0.89
SMARCA1-201ENST00000371121 HIGD1CA8MV81 97 aa9.49□□□□□ -0.89
SMARCA1-201ENST00000371121 FNDC10F2Z333 226 aa9.49□□□□□ -0.89
SMARCA1-201ENST00000371121 LOXL3P58215 753 aa9.49□□□□□ -0.89
SMARCA1-201ENST00000371121 FAM231DQ6ZW35 169 aa9.49□□□□□ -0.89
SMARCA1-201ENST00000371121 SSX8Q7RTT4 187 aa9.49□□□□□ -0.89
SMARCA1-201ENST00000371121 TSTD1Q8NFU3 115 aa9.49□□□□□ -0.89
SMARCA1-201ENST00000371121 SLC25A40Q8TBP6 338 aa9.49□□□□□ -0.89
SMARCA1-201ENST00000371121 TMEM14BQ9NUH8 114 aa9.49□□□□□ -0.89
SMARCA1-201ENST00000371121 COX19Q49B96 90 aa9.49□□□□□ -0.89
SMARCA1-201ENST00000371121 RUSC1-AS1Q66K80 236 aa9.49□□□□□ -0.89
SMARCA1-201ENST00000371121 OR1B1Q8NGR6 318 aa9.49□□□□□ -0.89
SMARCA1-201ENST00000371121 IFI27L2Q9H2X8 130 aa9.49□□□□□ -0.89
SMARCA1-201ENST00000371121 KNTC1P50748 2209 aa9.49□□□□□ -0.89
SMARCA1-201ENST00000371121 SNAI2O43623 268 aa9.49□□□□□ -0.89
SMARCA1-201ENST00000371121 C18orf15Q96N68 181 aa9.49□□□□□ -0.89
SMARCA1-201ENST00000371121 SERTAD4Q9NUC0 356 aa9.49□□□□□ -0.89
SMARCA1-201ENST00000371121 DNAJC13O75165 2243 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 C15orf61A6NNL5 157 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 SRYQ05066 204 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 C1orf185Q5T7R7 199 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 VWA1Q6PCB0 445 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 LRRC29Q8WV35 223 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 CORO2AQ92828 525 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 NAA38Q9BRA0 125 aaKnown RBP9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 SLC25A33Q9BSK2 321 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 SAP30LQ9HAJ7 183 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 MYCNOSP40205 109 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 TIGITQ495A1 244 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 PRAMEF5Q5TYX0 476 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 PRAMEF6Q5VXH4 476 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 MDP1Q86V88 176 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 CD177Q8N6Q3 437 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 TEX45Q8NA69 505 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 OR9G1Q8NH87 305 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 HES7Q9BYE0 225 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 ARFGEF3Q5TH69 2177 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 CEP290O15078 2479 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 GRPP07492 148 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 GDF1P27539 372 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 MPV17P39210 176 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 CAMPP49913 170 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 C3AR1Q16581 482 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 LTC4SQ16873 150 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 SLC25A34Q6PIV7 304 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 CLUHP3Q96NS8 147 aa9.48□□□□□ -0.89
SMARCA1-201ENST00000371121 ZNF785A8K8V0 405 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 APOHP02749 345 aaPredicted RBP9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 PYYP10082 97 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 ZNF329Q86UD4 541 aa9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 FNDC4Q9H6D8 234 aaPredicted RBP9.47□□□□□ -0.89
SMARCA1-201ENST00000371121 PPIAL4EA0A075B759 164 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms