RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 GABRA3P34903 492 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 PSMB2P49721 201 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 LHX2P50458 406 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 RND2P52198 227 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 SLC25A1P53007 311 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 RPL26P61254 145 aaKnown RBP2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 RHOGP84095 191 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 LOXL1Q08397 574 aaPredicted RBP2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 ZNF155Q12901 538 aaPredicted RBP2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 GSG1Q2KHT4 349 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 KLF17Q5JT82 389 aaPredicted RBP2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 TSPO2Q5TGU0 170 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 Q6ZSV7 163 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 TCF23Q7RTU1 214 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 C11orf42Q8N5U0 333 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 NPWQ8N729 165 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 SAMD12Q8N8I0 201 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 OR51T1Q8NGJ9 327 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 OR1N2Q8NGR9 330 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 OR5K1Q8NHB7 308 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 FRZBQ92765 325 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 C2orf48Q96LS8 159 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 C9orf85Q96MD7 179 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 OR52B2Q96RD2 323 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 MGLLQ99685 303 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 NRIP2Q9BQI9 281 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 C1QTNF4Q9BXJ3 329 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 GNB1LQ9BYB4 327 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 FGF22Q9HCT0 170 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 SCN3BQ9NY72 215 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 TMEM216Q9P0N5 145 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 NAT8Q9UHE5 227 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 WASHC3Q9Y3C0 194 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 MED12Q93074 2177 aa2.74□□□□□ -1.97
ECHDC1-205ENST00000368295 DOCK10Q96BY6 2186 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 SAA2-SAA4A0A096LPE2 208 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 IGLV9-49A0A0B4J1Y8 123 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 PNMA8CA0A1B0GUJ8 204 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 A0A1B0GXF2 115 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 ZNF850A8MQ14 1090 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 ZNF587BE7ETH6 402 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 NTN1O95631 604 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 AMBPP02760 352 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 GYPCP04921 128 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 SOD3P08294 240 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 TRAPPC2P0DI81 140 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 TRAPPC2BP0DI82 140 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 CPMP14384 443 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 ATP6V0CP27449 155 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 MFAP2P55001 183 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 LMO4P61968 165 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 RPS21P63220 83 aaKnown RBP2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 HLA-DRB3P79483 266 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 IFITM3Q01628 133 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 P2RY6Q15077 328 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 C12orf74Q32Q52 190 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 LINC00299Q6ZSB3 139 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 C17orf82Q86X59 251 aaPredicted RBP2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 OR52R1Q8NGF1 315 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 LCN9Q8WX39 176 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 TAF15Q92804 592 aaKnown RBP eCLIP2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 SLAMF6Q96DU3 332 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 SIGLEC12Q96PQ1 595 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 ANAPC13Q9BS18 74 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 TMEM147Q9BVK8 224 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 SPANXDQ9BXN6 97 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 CXorf21Q9HAI6 301 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 ZNF224Q9NZL3 707 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 PLCE1Q9P212 2302 aa2.73□□□□□ -1.97
ECHDC1-205ENST00000368295 MALRD1Q5VYJ5 2156 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 IGKV1D-8A0A087WSZ0 117 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 TMED7-TICAM2A0A0A6YYA0 188 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 TRAV8-6A0A0B4J262 113 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 TMEM269A0A1B0GVZ9 245 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 PGPA6NDG6 321 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 KNCNA6PVL3 124 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 C1orf196B1AJZ1 125 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 H0Y9J4 135 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 DNASE2O00115 360 aaPredicted RBP2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 PHOX2AO14813 284 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 RBMY1CP0DJD4 496 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 CD1DP15813 335 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 S100A2P29034 98 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 MPGP29372 298 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 RPS13P62277 151 aaKnown RBP2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 FABP5Q01469 135 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 ZNF266Q14584 549 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 GLYATL3Q5SZD4 288 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 CNIH2Q6PI25 160 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 MOB1BQ7L9L4 216 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 SNX29P2Q8IUI4 249 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 ANKRD29Q8N6D5 301 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 PACRGLQ8N7B6 248 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 OR4C3Q8NH37 302 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 GALNT14Q96FL9 552 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 IP6K3Q96PC2 410 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 DERL3Q96Q80 235 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 TSPAN32Q96QS1 320 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 HIST1H4GQ99525 98 aa2.72□□□□□ -1.97
ECHDC1-205ENST00000368295 PRADC1Q9BSG0 188 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms