RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 S1PR3Q99500 378 aa12.05□□□□□ -0.48
PRKN-204ENST00000366896 DUSP13Q9UII6 198 aa12.05□□□□□ -0.48
PRKN-204ENST00000366896 SH3BGRL2Q9UJC5 107 aa12.05□□□□□ -0.48
PRKN-204ENST00000366896 ARL2-SNX15V9GYD0 113 aa12.05□□□□□ -0.48
PRKN-204ENST00000366896 CGB3P0DN86 165 aa12.05□□□□□ -0.48
PRKN-204ENST00000366896 CGB7P0DN87 165 aa12.05□□□□□ -0.48
PRKN-204ENST00000366896 AMTP48728 403 aa12.05□□□□□ -0.48
PRKN-204ENST00000366896 GNG10P50151 68 aa12.05□□□□□ -0.48
PRKN-204ENST00000366896 OR8I2Q8N0Y5 310 aa12.05□□□□□ -0.48
PRKN-204ENST00000366896 MS4A5Q9H3V2 200 aa12.05□□□□□ -0.48
PRKN-204ENST00000366896 HCFC1P51610 2035 aa12.05□□□□□ -0.48
PRKN-204ENST00000366896 A0A1W2PS18 150 aa12.04□□□□□ -0.48
PRKN-204ENST00000366896 WDR73Q6P4I2 378 aa12.04□□□□□ -0.48
PRKN-204ENST00000366896 C1orf229Q6ZS94 237 aaPredicted RBP12.04□□□□□ -0.48
PRKN-204ENST00000366896 OR4S2Q8NH73 311 aa12.04□□□□□ -0.48
PRKN-204ENST00000366896 TXN2Q99757 166 aa12.04□□□□□ -0.48
PRKN-204ENST00000366896 TMEM140Q9NV12 185 aa12.04□□□□□ -0.48
PRKN-204ENST00000366896 NAT8BQ9UHF3 227 aa12.04□□□□□ -0.48
PRKN-204ENST00000366896 TCF19Q9Y242 345 aa12.04□□□□□ -0.48
PRKN-204ENST00000366896 INTS1Q8N201 2190 aaKnown RBP12.04□□□□□ -0.48
PRKN-204ENST00000366896 IGSF10Q6WRI0 2623 aa12.04□□□□□ -0.48
PRKN-204ENST00000366896 C15orf61A6NNL5 157 aa12.04□□□□□ -0.48
PRKN-204ENST00000366896 CCL25O15444 150 aa12.04□□□□□ -0.48
PRKN-204ENST00000366896 REG1AP05451 166 aa12.04□□□□□ -0.48
PRKN-204ENST00000366896 HNRNPA3P51991 378 aaKnown RBP12.04□□□□□ -0.48
PRKN-204ENST00000366896 POU2AF1Q16633 256 aa12.04□□□□□ -0.48
PRKN-204ENST00000366896 Q6ZN92 141 aa12.04□□□□□ -0.48
PRKN-204ENST00000366896 ABHD12Q8N2K0 398 aa12.04□□□□□ -0.48
PRKN-204ENST00000366896 LEAP2Q969E1 77 aa12.04□□□□□ -0.48
PRKN-204ENST00000366896 RCHY1Q96PM5 261 aa12.04□□□□□ -0.48
PRKN-204ENST00000366896 FOXA2Q9Y261 457 aaPredicted RBP12.04□□□□□ -0.48
PRKN-204ENST00000366896 TET2Q6N021 2002 aaPredicted RBP12.04□□□□□ -0.48
PRKN-204ENST00000366896 EPG5Q9HCE0 2579 aa12.04□□□□□ -0.48
PRKN-204ENST00000366896 RP1L1Q8IWN7 2480 aaPredicted RBP12.03□□□□□ -0.48
PRKN-204ENST00000366896 ZNF83P51522 516 aa12.03□□□□□ -0.48
PRKN-204ENST00000366896 RBX1P62877 108 aa12.03□□□□□ -0.48
PRKN-204ENST00000366896 CX3CL1P78423 397 aa12.03□□□□□ -0.48
PRKN-204ENST00000366896 ALKBH2Q6NS38 261 aa12.03□□□□□ -0.48
PRKN-204ENST00000366896 TMEM136Q6ZRR5 245 aa12.03□□□□□ -0.48
PRKN-204ENST00000366896 GCSAMQ8N6F7 178 aa12.03□□□□□ -0.48
PRKN-204ENST00000366896 ZNRF1Q8ND25 227 aa12.03□□□□□ -0.48
PRKN-204ENST00000366896 BBC3Q96PG8 261 aaPredicted RBP12.03□□□□□ -0.48
PRKN-204ENST00000366896 UHRF2Q96PU4 802 aa12.03□□□□□ -0.48
PRKN-204ENST00000366896 COL6A6A6NMZ7 2263 aa12.03□□□□□ -0.48
PRKN-204ENST00000366896 CGAP01215 116 aa12.03□□□□□ -0.48
PRKN-204ENST00000366896 OR10J4P0C629 311 aa12.03□□□□□ -0.48
PRKN-204ENST00000366896 CA7P43166 264 aa12.03□□□□□ -0.48
PRKN-204ENST00000366896 PRRX1P54821 245 aa12.03□□□□□ -0.48
PRKN-204ENST00000366896 RPL19P84098 196 aaKnown RBP12.03□□□□□ -0.48
PRKN-204ENST00000366896 COX19Q49B96 90 aa12.03□□□□□ -0.48
PRKN-204ENST00000366896 RNASE8Q8TDE3 154 aaKnown RBP12.03□□□□□ -0.48
PRKN-204ENST00000366896 C1orf159Q96HA4 380 aa12.03□□□□□ -0.48
PRKN-204ENST00000366896 POLEQ07864 2286 aa12.02□□□□□ -0.48
PRKN-204ENST00000366896 ZNF324O75467 553 aaPredicted RBP12.02□□□□□ -0.48
PRKN-204ENST00000366896 MT-CO2P00403 227 aa12.02□□□□□ -0.48
PRKN-204ENST00000366896 LHBP01229 141 aa12.02□□□□□ -0.48
PRKN-204ENST00000366896 C3orf79P0CE67 100 aa12.02□□□□□ -0.48
PRKN-204ENST00000366896 AREGP15514 252 aa12.02□□□□□ -0.48
PRKN-204ENST00000366896 PMCHP20382 165 aa12.02□□□□□ -0.48
PRKN-204ENST00000366896 PTTG1IPP53801 180 aa12.02□□□□□ -0.48
PRKN-204ENST00000366896 RHOBP62745 196 aa12.02□□□□□ -0.48
PRKN-204ENST00000366896 C3orf36Q3SXR2 165 aa12.02□□□□□ -0.48
PRKN-204ENST00000366896 LEMD1Q68G75 181 aa12.02□□□□□ -0.48
PRKN-204ENST00000366896 NIT1Q86X76 327 aa12.02□□□□□ -0.48
PRKN-204ENST00000366896 SSMEM1Q8WWF3 244 aa12.02□□□□□ -0.48
PRKN-204ENST00000366896 CORO2AQ92828 525 aa12.02□□□□□ -0.48
PRKN-204ENST00000366896 ADTRPQ96IZ2 230 aa12.02□□□□□ -0.48
PRKN-204ENST00000366896 VKORC1Q9BQB6 163 aa12.02□□□□□ -0.48
PRKN-204ENST00000366896 TMEM14BQ9NUH8 114 aa12.02□□□□□ -0.48
PRKN-204ENST00000366896 PROCRQ9UNN8 238 aa12.02□□□□□ -0.48
PRKN-204ENST00000366896 SLC25A15Q9Y619 301 aa12.02□□□□□ -0.48
PRKN-204ENST00000366896 A0A0G2JNJ9 132 aa12.02□□□□□ -0.49
PRKN-204ENST00000366896 NKX6-3A6NJ46 265 aa12.02□□□□□ -0.49
PRKN-204ENST00000366896 KLF3P57682 345 aaPredicted RBP12.02□□□□□ -0.49
PRKN-204ENST00000366896 HSPE1P61604 102 aaKnown RBP12.02□□□□□ -0.49
PRKN-204ENST00000366896 RAB31Q13636 194 aa12.02□□□□□ -0.49
PRKN-204ENST00000366896 EFNB3Q15768 340 aa12.02□□□□□ -0.49
PRKN-204ENST00000366896 TEPPQ6URK8 271 aa12.02□□□□□ -0.49
PRKN-204ENST00000366896 GAL3ST2Q9H3Q3 398 aa12.02□□□□□ -0.49
PRKN-204ENST00000366896 SEPSECSQ9HD40 501 aaKnown RBP12.02□□□□□ -0.49
PRKN-204ENST00000366896 CALYQ9NYX4 217 aa12.02□□□□□ -0.49
PRKN-204ENST00000366896 Q9UFV3 132 aa12.02□□□□□ -0.49
PRKN-204ENST00000366896 DPRXA6NFQ7 191 aa12.01□□□□□ -0.49
PRKN-204ENST00000366896 TOMM40O96008 361 aa12.01□□□□□ -0.49
PRKN-204ENST00000366896 ATP5IP56385 69 aaPredicted RBP12.01□□□□□ -0.49
PRKN-204ENST00000366896 TMEM30BQ3MIR4 351 aa12.01□□□□□ -0.49
PRKN-204ENST00000366896 KIAA1644Q3SXP7 199 aa12.01□□□□□ -0.49
PRKN-204ENST00000366896 SPATA31B1PQ5VZV4 182 aa12.01□□□□□ -0.49
PRKN-204ENST00000366896 BHLHA15Q7RTS1 189 aaPredicted RBP12.01□□□□□ -0.49
PRKN-204ENST00000366896 KLHDC1Q8N7A1 406 aa12.01□□□□□ -0.49
PRKN-204ENST00000366896 SLC25A10Q9UBX3 287 aaPredicted RBP12.01□□□□□ -0.49
PRKN-204ENST00000366896 NPY1RP25929 384 aa12□□□□□ -0.49
PRKN-204ENST00000366896 PRR20EP86478 221 aa12□□□□□ -0.49
PRKN-204ENST00000366896 PRR20CP86479 221 aa12□□□□□ -0.49
PRKN-204ENST00000366896 PRR20DP86480 221 aa12□□□□□ -0.49
PRKN-204ENST00000366896 PRR20BP86481 221 aa12□□□□□ -0.49
PRKN-204ENST00000366896 PRR20AP86496 221 aa12□□□□□ -0.49
PRKN-204ENST00000366896 FAM201AQ5SY85 155 aa12□□□□□ -0.49
PRKN-204ENST00000366896 C19orf35Q6ZS72 473 aa12□□□□□ -0.49
PRKN-204ENST00000366896 SLC24A4Q8NFF2 622 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms