RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 PQLC2Q6ZP29 291 aa13.27□□□□□ -0.29
IFT140-201ENST00000361339 SEPSECSQ9HD40 501 aaKnown RBP13.27□□□□□ -0.29
IFT140-201ENST00000361339 MBD3L4A6NDZ8 208 aaPredicted RBP13.26□□□□□ -0.29
IFT140-201ENST00000361339 MBD3L3A6NE82 208 aaPredicted RBP13.26□□□□□ -0.29
IFT140-201ENST00000361339 MBD3L5A6NJ08 208 aaPredicted RBP13.26□□□□□ -0.29
IFT140-201ENST00000361339 MMP23AO75900 390 aa13.26□□□□□ -0.29
IFT140-201ENST00000361339 ABHD12Q8N2K0 398 aa13.26□□□□□ -0.29
IFT140-201ENST00000361339 MBD3L2Q8NHZ7 208 aaPredicted RBP13.26□□□□□ -0.29
IFT140-201ENST00000361339 SLC35D1Q9NTN3 355 aa13.26□□□□□ -0.29
IFT140-201ENST00000361339 H0Y8G0 127 aa13.26□□□□□ -0.29
IFT140-201ENST00000361339 CA2P00918 260 aa13.26□□□□□ -0.29
IFT140-201ENST00000361339 STUMQ69YW2 141 aa13.26□□□□□ -0.29
IFT140-201ENST00000361339 FAM90A1Q86YD7 464 aa13.26□□□□□ -0.29
IFT140-201ENST00000361339 TCTEX1D1Q8N7M0 179 aa13.26□□□□□ -0.29
IFT140-201ENST00000361339 Q8N7P7 452 aa13.26□□□□□ -0.29
IFT140-201ENST00000361339 IFI27L2Q9H2X8 130 aa13.26□□□□□ -0.29
IFT140-201ENST00000361339 FAM90A26D6RGX4 464 aa13.26□□□□□ -0.29
IFT140-201ENST00000361339 ITGB1BP1O14713 200 aa13.26□□□□□ -0.29
IFT140-201ENST00000361339 RAB29O14966 203 aa13.26□□□□□ -0.29
IFT140-201ENST00000361339 ZNF324O75467 553 aaPredicted RBP13.26□□□□□ -0.29
IFT140-201ENST00000361339 PSG1P11464 419 aa13.26□□□□□ -0.29
IFT140-201ENST00000361339 CRYBB3P26998 211 aa13.26□□□□□ -0.29
IFT140-201ENST00000361339 GPR6P46095 362 aaPredicted RBP13.26□□□□□ -0.29
IFT140-201ENST00000361339 PMCHL1Q16048 86 aa13.26□□□□□ -0.29
IFT140-201ENST00000361339 AARDQ4LEZ3 155 aa13.26□□□□□ -0.29
IFT140-201ENST00000361339 ZBTB34Q8NCN2 500 aa13.26□□□□□ -0.29
IFT140-201ENST00000361339 OR4P4Q8NGL7 312 aa13.26□□□□□ -0.29
IFT140-201ENST00000361339 KCNS1Q96KK3 526 aa13.26□□□□□ -0.29
IFT140-201ENST00000361339 PRAMEF5Q5TYX0 476 aa13.25□□□□□ -0.29
IFT140-201ENST00000361339 NIT1Q86X76 327 aa13.25□□□□□ -0.29
IFT140-201ENST00000361339 MCRIP2Q9BUT9 160 aaKnown RBP13.25□□□□□ -0.29
IFT140-201ENST00000361339 HEYLQ9NQ87 328 aaPredicted RBP13.25□□□□□ -0.29
IFT140-201ENST00000361339 LRBAP50851 2863 aa13.25□□□□□ -0.29
IFT140-201ENST00000361339 FAM216BQ8N7L0 139 aa13.25□□□□□ -0.29
IFT140-201ENST00000361339 RBMXL3Q8N7X1 1067 aaKnown RBP13.25□□□□□ -0.29
IFT140-201ENST00000361339 CEACAM4O75871 244 aa13.24□□□□□ -0.29
IFT140-201ENST00000361339 KLHDC1Q8N7A1 406 aa13.24□□□□□ -0.29
IFT140-201ENST00000361339 TSKUQ8WUA8 353 aa13.24□□□□□ -0.29
IFT140-201ENST00000361339 EAF1Q96JC9 268 aaPredicted RBP13.24□□□□□ -0.29
IFT140-201ENST00000361339 MS4A5Q9H3V2 200 aa13.24□□□□□ -0.29
IFT140-201ENST00000361339 PRRX1P54821 245 aa13.24□□□□□ -0.29
IFT140-201ENST00000361339 BPIFB3P59826 476 aa13.24□□□□□ -0.29
IFT140-201ENST00000361339 Q0VG73 95 aa13.24□□□□□ -0.29
IFT140-201ENST00000361339 FAM122AQ96E09 287 aa13.24□□□□□ -0.29
IFT140-201ENST00000361339 CCL13Q99616 98 aa13.24□□□□□ -0.29
IFT140-201ENST00000361339 HSD17B10Q99714 261 aaKnown RBP13.24□□□□□ -0.29
IFT140-201ENST00000361339 HINT2Q9BX68 163 aa13.24□□□□□ -0.29
IFT140-201ENST00000361339 WASHC3Q9Y3C0 194 aa13.24□□□□□ -0.29
IFT140-201ENST00000361339 DCHS2Q6V1P9 2916 aa13.24□□□□□ -0.29
IFT140-201ENST00000361339 KLK10O43240 276 aa13.23□□□□□ -0.29
IFT140-201ENST00000361339 TNFSF4P23510 183 aa13.23□□□□□ -0.29
IFT140-201ENST00000361339 C17orf58Q2M2W7 97 aa13.23□□□□□ -0.29
IFT140-201ENST00000361339 MPV17L2Q567V2 206 aa13.23□□□□□ -0.29
IFT140-201ENST00000361339 CENPWQ5EE01 88 aa13.23□□□□□ -0.29
IFT140-201ENST00000361339 CT45A1Q5HYN5 189 aa13.23□□□□□ -0.29
IFT140-201ENST00000361339 CT45A3Q8NHU0 189 aa13.23□□□□□ -0.29
IFT140-201ENST00000361339 CALYQ9NYX4 217 aa13.23□□□□□ -0.29
IFT140-201ENST00000361339 IGLL1P15814 213 aa13.23□□□□□ -0.29
IFT140-201ENST00000361339 RNASEKQ6P5S7 137 aaKnown RBP13.23□□□□□ -0.29
IFT140-201ENST00000361339 ZNF439Q8NDP4 499 aa13.23□□□□□ -0.29
IFT140-201ENST00000361339 CLEC5AQ9NY25 188 aa13.23□□□□□ -0.29
IFT140-201ENST00000361339 RAI1Q7Z5J4 1906 aaPredicted RBP13.23□□□□□ -0.29
IFT140-201ENST00000361339 ZZEF1O43149 2961 aa13.23□□□□□ -0.29
IFT140-201ENST00000361339 SVEP1Q4LDE5 3571 aa13.23□□□□□ -0.29
IFT140-201ENST00000361339 SH2D7A6NKC9 451 aaPredicted RBP13.23□□□□□ -0.29
IFT140-201ENST00000361339 ZNF891A8MT65 544 aaPredicted RBP13.23□□□□□ -0.29
IFT140-201ENST00000361339 BMPR1BO00238 502 aa13.23□□□□□ -0.29
IFT140-201ENST00000361339 MGST3O14880 152 aa13.23□□□□□ -0.29
IFT140-201ENST00000361339 HSBP1O75506 76 aa13.23□□□□□ -0.29
IFT140-201ENST00000361339 OR10J4P0C629 311 aa13.23□□□□□ -0.29
IFT140-201ENST00000361339 ESDP10768 282 aa13.23□□□□□ -0.29
IFT140-201ENST00000361339 GNG4P50150 75 aa13.23□□□□□ -0.29
IFT140-201ENST00000361339 TNXAQ16473 311 aa13.23□□□□□ -0.29
IFT140-201ENST00000361339 OR4A47Q6IF82 309 aa13.23□□□□□ -0.29
IFT140-201ENST00000361339 KIR3DL3Q8N743 410 aa13.23□□□□□ -0.29
IFT140-201ENST00000361339 SLC24A4Q8NFF2 622 aa13.23□□□□□ -0.29
IFT140-201ENST00000361339 SSBP4Q9BWG4 385 aaPredicted RBP13.23□□□□□ -0.29
IFT140-201ENST00000361339 V9GYV3 84 aa13.23□□□□□ -0.29
IFT140-201ENST00000361339 OR2T8A6NH00 312 aa13.22□□□□□ -0.29
IFT140-201ENST00000361339 TREML4Q6UXN2 200 aa13.22□□□□□ -0.29
IFT140-201ENST00000361339 MGST2Q99735 147 aa13.22□□□□□ -0.29
IFT140-201ENST00000361339 ARL2-SNX15V9GYD0 113 aa13.22□□□□□ -0.29
IFT140-201ENST00000361339 NBASA2RRP1 2371 aa13.22□□□□□ -0.29
IFT140-201ENST00000361339 CXorf1O96002 111 aa13.22□□□□□ -0.29
IFT140-201ENST00000361339 CD24P25063 80 aa13.22□□□□□ -0.29
IFT140-201ENST00000361339 GCHFRP30047 84 aa13.22□□□□□ -0.29
IFT140-201ENST00000361339 CCL8P80075 99 aa13.22□□□□□ -0.29
IFT140-201ENST00000361339 WDR83OSQ9Y284 106 aa13.22□□□□□ -0.29
IFT140-201ENST00000361339 SAA2-SAA4A0A096LPE2 208 aa13.21□□□□□ -0.29
IFT140-201ENST00000361339 A0A1W2PN81 502 aa13.21□□□□□ -0.29
IFT140-201ENST00000361339 HELTA6NFD8 242 aa13.21□□□□□ -0.29
IFT140-201ENST00000361339 M0R2Z0 102 aa13.21□□□□□ -0.29
IFT140-201ENST00000361339 ADH4P08319 380 aa13.21□□□□□ -0.29
IFT140-201ENST00000361339 SAA2P0DJI9 122 aaPredicted RBP13.21□□□□□ -0.29
IFT140-201ENST00000361339 RIPPLY3P57055 190 aa13.21□□□□□ -0.29
IFT140-201ENST00000361339 TMEM136Q6ZRR5 245 aa13.21□□□□□ -0.29
IFT140-201ENST00000361339 TMEM140Q9NV12 185 aa13.21□□□□□ -0.29
IFT140-201ENST00000361339 TLN1Q9Y490 2541 aaKnown RBP13.21□□□□□ -0.29
IFT140-201ENST00000361339 PIGBOS1A0A0B4J2F0 54 aa13.21□□□□□ -0.29
IFT140-201ENST00000361339 IGHV1-46P01743 117 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms