RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 TSTD3H0UI37 97 aa18.32■□□□□ 0.52
LDB1-201ENST00000361198 C1QTNF9P0C862 333 aa18.32■□□□□ 0.52
LDB1-201ENST00000361198 TMEM177Q53S58 311 aa18.32■□□□□ 0.52
LDB1-201ENST00000361198 SSMEM1Q8WWF3 244 aa18.32■□□□□ 0.52
LDB1-201ENST00000361198 FLYWCH2Q96CP2 140 aaKnown RBP18.32■□□□□ 0.52
LDB1-201ENST00000361198 SFRP2Q96HF1 295 aa18.32■□□□□ 0.52
LDB1-201ENST00000361198 C14orf144Q96I85 54 aa18.32■□□□□ 0.52
LDB1-201ENST00000361198 AURKAIP1Q9NWT8 199 aaPredicted RBP18.32■□□□□ 0.52
LDB1-201ENST00000361198 TEPPQ6URK8 271 aa18.32■□□□□ 0.52
LDB1-201ENST00000361198 OR9G1Q8NH87 305 aa18.32■□□□□ 0.52
LDB1-201ENST00000361198 FKBP11Q9NYL4 201 aa18.32■□□□□ 0.52
LDB1-201ENST00000361198 FAM71F2Q6NXP2 309 aa18.31■□□□□ 0.52
LDB1-201ENST00000361198 OR5B3Q8NH48 314 aa18.31■□□□□ 0.52
LDB1-201ENST00000361198 DDTP30046 118 aa18.3■□□□□ 0.52
LDB1-201ENST00000361198 RPL29P47914 159 aaKnown RBP18.3■□□□□ 0.52
LDB1-201ENST00000361198 OR10W1Q8NGF6 305 aa18.3■□□□□ 0.52
LDB1-201ENST00000361198 OR4C13Q8NGP0 309 aa18.3■□□□□ 0.52
LDB1-201ENST00000361198 PGPEP1LA6NFU8 196 aa18.3■□□□□ 0.52
LDB1-201ENST00000361198 FNDC10F2Z333 226 aa18.3■□□□□ 0.52
LDB1-201ENST00000361198 GCGP01275 180 aa18.3■□□□□ 0.52
LDB1-201ENST00000361198 TMEM204Q9BSN7 226 aa18.3■□□□□ 0.52
LDB1-201ENST00000361198 RALYQ9UKM9 306 aaKnown RBP18.3■□□□□ 0.52
LDB1-201ENST00000361198 GCHFRP30047 84 aa18.29■□□□□ 0.52
LDB1-201ENST00000361198 CNN1P51911 297 aaKnown RBP18.29■□□□□ 0.52
LDB1-201ENST00000361198 ZNF137PP52743 207 aa18.29■□□□□ 0.52
LDB1-201ENST00000361198 DLX1P56177 255 aa18.29■□□□□ 0.52
LDB1-201ENST00000361198 SPTBN1Q01082 2364 aaKnown RBP18.29■□□□□ 0.52
LDB1-201ENST00000361198 PRSS8Q16651 343 aa18.29■□□□□ 0.52
LDB1-201ENST00000361198 ZNF841Q6ZN19 808 aa18.29■□□□□ 0.52
LDB1-201ENST00000361198 SEPSECSQ9HD40 501 aaKnown RBP18.29■□□□□ 0.52
LDB1-201ENST00000361198 YTHDF2Q9Y5A9 579 aaKnown RBP18.29■□□□□ 0.52
LDB1-201ENST00000361198 A0A0U1RQK1 487 aa18.29■□□□□ 0.52
LDB1-201ENST00000361198 SCO2A0A1W2PP80 73 aa18.29■□□□□ 0.52
LDB1-201ENST00000361198 ZNF320A2RRD8 509 aa18.29■□□□□ 0.52
LDB1-201ENST00000361198 RHOBP62745 196 aa18.29■□□□□ 0.52
LDB1-201ENST00000361198 PDPNQ86YL7 162 aa18.29■□□□□ 0.52
LDB1-201ENST00000361198 STPG3Q8N7X2 389 aa18.29■□□□□ 0.52
LDB1-201ENST00000361198 SGMS2Q8NHU3 365 aa18.29■□□□□ 0.52
LDB1-201ENST00000361198 FAM122AQ96E09 287 aa18.29■□□□□ 0.52
LDB1-201ENST00000361198 TMEM133Q9H2Q1 129 aa18.29■□□□□ 0.52
LDB1-201ENST00000361198 E7EUB6 86 aa18.28■□□□□ 0.52
LDB1-201ENST00000361198 RPL8P62917 257 aaKnown RBP18.28■□□□□ 0.52
LDB1-201ENST00000361198 PRR20EP86478 221 aa18.28■□□□□ 0.52
LDB1-201ENST00000361198 PRR20CP86479 221 aa18.28■□□□□ 0.52
LDB1-201ENST00000361198 PRR20DP86480 221 aa18.28■□□□□ 0.52
LDB1-201ENST00000361198 PRR20BP86481 221 aa18.28■□□□□ 0.52
LDB1-201ENST00000361198 PRR20AP86496 221 aa18.28■□□□□ 0.52
LDB1-201ENST00000361198 REC114Q7Z4M0 266 aa18.28■□□□□ 0.52
LDB1-201ENST00000361198 MOB3BQ86TA1 216 aa18.28■□□□□ 0.52
LDB1-201ENST00000361198 TGIF2LXQ8IUE1 241 aa18.28■□□□□ 0.52
LDB1-201ENST00000361198 HRNRQ86YZ3 2850 aaPredicted RBP18.28■□□□□ 0.52
LDB1-201ENST00000361198 MDFIC2A0A1B0GVS7 189 aa18.28■□□□□ 0.52
LDB1-201ENST00000361198 RAB31Q13636 194 aa18.28■□□□□ 0.52
LDB1-201ENST00000361198 OCC1Q8TAD7 63 aa18.28■□□□□ 0.52
LDB1-201ENST00000361198 C11orf52Q96A22 123 aa18.28■□□□□ 0.52
LDB1-201ENST00000361198 TMEM18Q96B42 140 aa18.28■□□□□ 0.52
LDB1-201ENST00000361198 COMMD5Q9GZQ3 224 aa18.28■□□□□ 0.52
LDB1-201ENST00000361198 NDUFA4L2Q9NRX3 87 aa18.28■□□□□ 0.52
LDB1-201ENST00000361198 TACC2O95359 2948 aa18.28■□□□□ 0.52
LDB1-201ENST00000361198 IGFBP2P18065 325 aa18.27■□□□□ 0.52
LDB1-201ENST00000361198 TEX38Q6PEX7 206 aa18.27■□□□□ 0.52
LDB1-201ENST00000361198 PRO1933Q9H354 126 aa18.27■□□□□ 0.52
LDB1-201ENST00000361198 WASHC3Q9Y3C0 194 aa18.27■□□□□ 0.52
LDB1-201ENST00000361198 PLXNB1O43157 2135 aa18.27■□□□□ 0.52
LDB1-201ENST00000361198 PRB3Q04118 309 aaPredicted RBP18.26■□□□□ 0.51
LDB1-201ENST00000361198 C2orf83Q53S99 150 aa18.26■□□□□ 0.51
LDB1-201ENST00000361198 TRAPPC1Q9Y5R8 145 aa18.26■□□□□ 0.51
LDB1-201ENST00000361198 IGLV2-23P01705 113 aa18.26■□□□□ 0.51
LDB1-201ENST00000361198 RNASE2P10153 161 aaKnown RBP18.26■□□□□ 0.51
LDB1-201ENST00000361198 USF1P22415 310 aaPredicted RBP18.26■□□□□ 0.51
LDB1-201ENST00000361198 LY6DQ14210 128 aa18.26■□□□□ 0.51
LDB1-201ENST00000361198 TMEM167AQ8TBQ9 72 aa18.26■□□□□ 0.51
LDB1-201ENST00000361198 HIVEP3Q5T1R4 2406 aa18.26■□□□□ 0.51
LDB1-201ENST00000361198 NAV3Q8IVL0 2385 aa18.26■□□□□ 0.51
LDB1-201ENST00000361198 LY6HO94772 140 aa18.25■□□□□ 0.51
LDB1-201ENST00000361198 PPOXP50336 477 aa18.25■□□□□ 0.51
LDB1-201ENST00000361198 SPATA31B1PQ5VZV4 182 aa18.25■□□□□ 0.51
LDB1-201ENST00000361198 GBGT1Q8N5D6 347 aa18.25■□□□□ 0.51
LDB1-201ENST00000361198 RITA1Q96K30 269 aa18.25■□□□□ 0.51
LDB1-201ENST00000361198 MT-CO2P00403 227 aa18.25■□□□□ 0.51
LDB1-201ENST00000361198 YPEL3P61236 119 aaPredicted RBP18.25■□□□□ 0.51
LDB1-201ENST00000361198 MLANAQ16655 118 aa18.25■□□□□ 0.51
LDB1-201ENST00000361198 OR10G8Q8NGN5 311 aa18.25■□□□□ 0.51
LDB1-201ENST00000361198 OR1L8Q8NGR8 309 aa18.25■□□□□ 0.51
LDB1-201ENST00000361198 LY96Q9Y6Y9 160 aa18.25■□□□□ 0.51
LDB1-201ENST00000361198 FSTL3O95633 263 aa18.24■□□□□ 0.51
LDB1-201ENST00000361198 LINC00869P0C866 280 aa18.24■□□□□ 0.51
LDB1-201ENST00000361198 VSTM2AQ8TAG5 236 aa18.24■□□□□ 0.51
LDB1-201ENST00000361198 ARL2-SNX15V9GYD0 113 aa18.24■□□□□ 0.51
LDB1-201ENST00000361198 IGKV1OR2-108A0A075B7D4 117 aa18.24■□□□□ 0.51
LDB1-201ENST00000361198 IGHV2-26A0A0B4J1V2 119 aa18.24■□□□□ 0.51
LDB1-201ENST00000361198 IGHV3-72A0A0B4J1Y9 119 aa18.24■□□□□ 0.51
LDB1-201ENST00000361198 C9JCJ5 164 aa18.24■□□□□ 0.51
LDB1-201ENST00000361198 AREGP15514 252 aa18.24■□□□□ 0.51
LDB1-201ENST00000361198 ATP5IP56385 69 aaPredicted RBP18.24■□□□□ 0.51
LDB1-201ENST00000361198 C10orf55Q5SWW7 151 aa18.24■□□□□ 0.51
LDB1-201ENST00000361198 ZNF664Q8N3J9 261 aa18.24■□□□□ 0.51
LDB1-201ENST00000361198 TRAV9-1A0A075B6T8 112 aa18.23■□□□□ 0.51
LDB1-201ENST00000361198 CGB1A6NKQ9 187 aa18.23■□□□□ 0.51
LDB1-201ENST00000361198 UNQ6494/PRO21346Q6UXR6 183 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms