RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 ELLP55199 621 aaPredicted RBP12.46□□□□□ -0.41
PDLIM7-201ENST00000355572 TAS2R19P59542 299 aa12.46□□□□□ -0.41
PDLIM7-201ENST00000355572 OR52B4Q8NGK2 314 aa12.46□□□□□ -0.41
PDLIM7-201ENST00000355572 C20orf24Q9BUV8 137 aa12.46□□□□□ -0.41
PDLIM7-201ENST00000355572 C5orf66Q9H5L9 145 aa12.46□□□□□ -0.41
PDLIM7-201ENST00000355572 PRR13Q9NZ81 148 aa12.46□□□□□ -0.41
PDLIM7-201ENST00000355572 UFC1Q9Y3C8 167 aa12.46□□□□□ -0.41
PDLIM7-201ENST00000355572 NDUFA4O00483 81 aa12.45□□□□□ -0.42
PDLIM7-201ENST00000355572 CTSDP07339 412 aaPredicted RBP12.45□□□□□ -0.42
PDLIM7-201ENST00000355572 OR5AC1P0C628 307 aa12.45□□□□□ -0.42
PDLIM7-201ENST00000355572 LYL1P12980 280 aa12.45□□□□□ -0.42
PDLIM7-201ENST00000355572 S100GP29377 79 aa12.45□□□□□ -0.42
PDLIM7-201ENST00000355572 ETV6P41212 452 aa12.45□□□□□ -0.42
PDLIM7-201ENST00000355572 MLANAQ16655 118 aa12.45□□□□□ -0.42
PDLIM7-201ENST00000355572 IGHV3OR16-13A0A075B7E8 117 aa12.44□□□□□ -0.42
PDLIM7-201ENST00000355572 IGHV3-74A0A0B4J1X5 117 aa12.44□□□□□ -0.42
PDLIM7-201ENST00000355572 RNASE2P10153 161 aaKnown RBP12.44□□□□□ -0.42
PDLIM7-201ENST00000355572 IL18Q14116 193 aa12.44□□□□□ -0.42
PDLIM7-201ENST00000355572 ODF3L2Q3SX64 289 aa12.44□□□□□ -0.42
PDLIM7-201ENST00000355572 PVRIGQ6DKI7 326 aa12.44□□□□□ -0.42
PDLIM7-201ENST00000355572 SPSB3Q6PJ21 355 aa12.44□□□□□ -0.42
PDLIM7-201ENST00000355572 GLYATL2Q8WU03 294 aa12.44□□□□□ -0.42
PDLIM7-201ENST00000355572 MARC2Q969Z3 335 aa12.44□□□□□ -0.42
PDLIM7-201ENST00000355572 TMEM230Q96A57 120 aa12.44□□□□□ -0.42
PDLIM7-201ENST00000355572 PINX1Q96BK5 328 aaKnown RBP12.44□□□□□ -0.42
PDLIM7-201ENST00000355572 DIRAS2Q96HU8 199 aa12.44□□□□□ -0.42
PDLIM7-201ENST00000355572 SOSTQ9BQB4 213 aa12.44□□□□□ -0.42
PDLIM7-201ENST00000355572 FNDC4Q9H6D8 234 aaPredicted RBP12.44□□□□□ -0.42
PDLIM7-201ENST00000355572 PALMDQ9NP74 551 aa12.44□□□□□ -0.42
PDLIM7-201ENST00000355572 DAZ1Q9NQZ3 744 aaKnown RBP12.44□□□□□ -0.42
PDLIM7-201ENST00000355572 CTDSPLO15194 276 aa12.43□□□□□ -0.42
PDLIM7-201ENST00000355572 APOHP02749 345 aaPredicted RBP12.43□□□□□ -0.42
PDLIM7-201ENST00000355572 FCGR2BP31994 310 aaPredicted RBP12.43□□□□□ -0.42
PDLIM7-201ENST00000355572 AKR1C2P52895 323 aa12.43□□□□□ -0.42
PDLIM7-201ENST00000355572 ZNF124Q15973 351 aa12.43□□□□□ -0.42
PDLIM7-201ENST00000355572 TRIM16LQ309B1 348 aa12.43□□□□□ -0.42
PDLIM7-201ENST00000355572 LILRB2Q8N423 598 aa12.43□□□□□ -0.42
PDLIM7-201ENST00000355572 ATP6V0BQ99437 205 aa12.43□□□□□ -0.42
PDLIM7-201ENST00000355572 RNF2Q99496 336 aa12.43□□□□□ -0.42
PDLIM7-201ENST00000355572 COPZ2Q9P299 210 aa12.43□□□□□ -0.42
PDLIM7-201ENST00000355572 GPR132Q9UNW8 380 aa12.43□□□□□ -0.42
PDLIM7-201ENST00000355572 TRAV25A0A0B4J276 109 aa12.42□□□□□ -0.42
PDLIM7-201ENST00000355572 TSPAN4O14817 238 aa12.42□□□□□ -0.42
PDLIM7-201ENST00000355572 CYB5BO43169 146 aa12.42□□□□□ -0.42
PDLIM7-201ENST00000355572 TNFSF8P32971 234 aa12.42□□□□□ -0.42
PDLIM7-201ENST00000355572 MFAP4P55083 255 aa12.42□□□□□ -0.42
PDLIM7-201ENST00000355572 MEF2DQ14814 521 aa12.42□□□□□ -0.42
PDLIM7-201ENST00000355572 SLC16A13Q7RTY0 426 aa12.42□□□□□ -0.42
PDLIM7-201ENST00000355572 SELENOHQ8IZQ5 122 aaKnown RBP12.42□□□□□ -0.42
PDLIM7-201ENST00000355572 OR51S1Q8NGJ8 323 aa12.42□□□□□ -0.42
PDLIM7-201ENST00000355572 OR1L6Q8NGR2 347 aa12.42□□□□□ -0.42
PDLIM7-201ENST00000355572 ZFAND1Q8TCF1 268 aa12.42□□□□□ -0.42
PDLIM7-201ENST00000355572 S100ZQ8WXG8 99 aa12.42□□□□□ -0.42
PDLIM7-201ENST00000355572 C6orf62Q9GZU0 229 aaPredicted RBP12.42□□□□□ -0.42
PDLIM7-201ENST00000355572 NXF2Q9GZY0 626 aaKnown RBP12.42□□□□□ -0.42
PDLIM7-201ENST00000355572 TMEM222Q9H0R3 208 aa12.42□□□□□ -0.42
PDLIM7-201ENST00000355572 SMPXQ9UHP9 88 aa12.42□□□□□ -0.42
PDLIM7-201ENST00000355572 IGHV7-4-1A0A0J9YVY3 117 aa12.41□□□□□ -0.42
PDLIM7-201ENST00000355572 ANKRD20A5PA0PJZ0 165 aa12.41□□□□□ -0.42
PDLIM7-201ENST00000355572 INS-IGF2F8WCM5 200 aa12.41□□□□□ -0.42
PDLIM7-201ENST00000355572 K7EMT4 169 aa12.41□□□□□ -0.42
PDLIM7-201ENST00000355572 CHEK1O14757 476 aa12.41□□□□□ -0.42
PDLIM7-201ENST00000355572 CDS2O95674 445 aa12.41□□□□□ -0.42
PDLIM7-201ENST00000355572 SSBP1Q04837 148 aaKnown RBP12.41□□□□□ -0.42
PDLIM7-201ENST00000355572 RBPMS2Q6ZRY4 209 aaKnown RBP12.41□□□□□ -0.42
PDLIM7-201ENST00000355572 TMEM170AQ8WVE7 144 aa12.41□□□□□ -0.42
PDLIM7-201ENST00000355572 GPR146Q96CH1 333 aa12.41□□□□□ -0.42
PDLIM7-201ENST00000355572 OR10C1Q96KK4 312 aa12.41□□□□□ -0.42
PDLIM7-201ENST00000355572 OVOL2Q9BRP0 275 aa12.41□□□□□ -0.42
PDLIM7-201ENST00000355572 NAA60Q9H7X0 242 aa12.41□□□□□ -0.42
PDLIM7-201ENST00000355572 ZFAND3Q9H8U3 227 aa12.41□□□□□ -0.42
PDLIM7-201ENST00000355572 TEX13DA0A0J9YY54 714 aaPredicted RBP12.4□□□□□ -0.42
PDLIM7-201ENST00000355572 A0A1B0GU03 582 aa12.4□□□□□ -0.42
PDLIM7-201ENST00000355572 CRYM-AS1A6NIL9 109 aa12.4□□□□□ -0.42
PDLIM7-201ENST00000355572 C15orf62A8K5M9 175 aa12.4□□□□□ -0.42
PDLIM7-201ENST00000355572 GSTZ1O43708 216 aaPredicted RBP12.4□□□□□ -0.42
PDLIM7-201ENST00000355572 NXPH3O95157 252 aa12.4□□□□□ -0.42
PDLIM7-201ENST00000355572 AKAIN1P0CW23 69 aa12.4□□□□□ -0.42
PDLIM7-201ENST00000355572 MRPS10P82664 201 aaKnown RBP12.4□□□□□ -0.42
PDLIM7-201ENST00000355572 EWSR1Q01844 656 aaKnown RBP eCLIP12.4□□□□□ -0.42
PDLIM7-201ENST00000355572 BSXQ3C1V8 233 aa12.4□□□□□ -0.42
PDLIM7-201ENST00000355572 FAM90A2PQ658T7 463 aa12.4□□□□□ -0.42
PDLIM7-201ENST00000355572 TOMM20LQ6UXN7 152 aa12.4□□□□□ -0.42
PDLIM7-201ENST00000355572 SLC35G3Q8N808 338 aa12.4□□□□□ -0.42
PDLIM7-201ENST00000355572 CCDC71LQ8N9Z2 235 aa12.4□□□□□ -0.42
PDLIM7-201ENST00000355572 C15orf40Q8WUR7 153 aa12.4□□□□□ -0.42
PDLIM7-201ENST00000355572 SPAG8Q99932 426 aaPredicted RBP12.4□□□□□ -0.42
PDLIM7-201ENST00000355572 RHPN1-AS1Q9BWJ2 59 aa12.4□□□□□ -0.42
PDLIM7-201ENST00000355572 GGTLC1Q9BX51 225 aa12.4□□□□□ -0.42
PDLIM7-201ENST00000355572 WDR12Q9GZL7 423 aaKnown RBP12.4□□□□□ -0.42
PDLIM7-201ENST00000355572 IGKV3-7A0A075B6H7 116 aa12.39□□□□□ -0.43
PDLIM7-201ENST00000355572 NUPL2O15504 423 aaKnown RBP12.39□□□□□ -0.43
PDLIM7-201ENST00000355572 IFNA17P01571 189 aa12.39□□□□□ -0.43
PDLIM7-201ENST00000355572 ERHP84090 104 aaKnown RBP12.39□□□□□ -0.43
PDLIM7-201ENST00000355572 AARDQ4LEZ3 155 aa12.39□□□□□ -0.43
PDLIM7-201ENST00000355572 HYDINQ4G0P3 5121 aa12.39□□□□□ -0.43
PDLIM7-201ENST00000355572 AGRNO00468 2067 aa12.39□□□□□ -0.43
PDLIM7-201ENST00000355572 LOC102724200A0A096LPH7 203 aaPredicted RBP12.38□□□□□ -0.43
PDLIM7-201ENST00000355572 IGHV3-66A0A0C4DH42 116 aa12.38□□□□□ -0.43
PDLIM7-201ENST00000355572 DISC1C4P0D8 188 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms