RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 RPS19BP1Q86WX3 136 aaKnown RBP4.28□□□□□ -1.73
SKP1-202ENST00000353411 LINC01555Q8NAE3 123 aa4.28□□□□□ -1.73
SKP1-202ENST00000353411 TIMD4Q96H15 378 aa4.28□□□□□ -1.73
SKP1-202ENST00000353411 RNASE7Q9H1E1 156 aaKnown RBP4.28□□□□□ -1.73
SKP1-202ENST00000353411 SLC25A10Q9UBX3 287 aaPredicted RBP4.28□□□□□ -1.73
SKP1-202ENST00000353411 EPDR1Q9UM22 224 aa4.28□□□□□ -1.73
SKP1-202ENST00000353411 B4GALT1P15291 398 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 IGLL1P15814 213 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 REG1BP48304 166 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 ETDBQ3ZM63 59 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 ASPHD2Q6ICH7 369 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 CBLN3Q6UW01 205 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 SAXO1Q8IYX7 474 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 IGKCP01834 107 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 IGLC1P0CG04 106 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 FOXF1Q12946 379 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 PAPPA-AS1Q5QFB9 102 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 PYGO2Q9BRQ0 406 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 NPFFR1Q9GZQ6 430 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 A0A1W2PNR3 127 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 RHOGP84095 191 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 SH2D7A6NKC9 451 aaPredicted RBP4.27□□□□□ -1.73
SKP1-202ENST00000353411 HERV-K104P63124 156 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 CDKN3Q16667 212 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 LINC00696Q6ZRV3 163 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 OR4A5Q8NH83 315 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 FAM222BQ8WU58 562 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 SRSF8Q9BRL6 282 aaKnown RBP4.27□□□□□ -1.73
SKP1-202ENST00000353411 CSPG4Q6UVK1 2322 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 A0A1B0GX78 115 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 IFNL4K9M1U5 179 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 HMGA1P17096 107 aaKnown RBP4.27□□□□□ -1.73
SKP1-202ENST00000353411 DUSP2Q05923 314 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 KLF17Q5JT82 389 aaPredicted RBP4.27□□□□□ -1.73
SKP1-202ENST00000353411 RPRMLQ8N4K4 120 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 OR5AN1Q8NGI8 311 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 RNF115Q9Y4L5 304 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 SAA2-SAA4A0A096LPE2 208 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 SCTP09683 121 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 ZNF688P0C7X2 276 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 DRD3P35462 400 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 ARPC1AQ92747 370 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 NAA38Q9BRA0 125 aaKnown RBP4.27□□□□□ -1.73
SKP1-202ENST00000353411 GDF1P27539 372 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 GNB1P62873 340 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 HGFACQ04756 655 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 CIRBPQ14011 172 aaKnown RBP4.27□□□□□ -1.73
SKP1-202ENST00000353411 PPP1R27Q86WC6 154 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 LRRC29Q8WV35 223 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 ZNF775Q96BV0 537 aaPredicted RBP4.27□□□□□ -1.73
SKP1-202ENST00000353411 FOXB1Q99853 325 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 EDA2RQ9HAV5 297 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 PLXNA2O75051 1894 aa4.27□□□□□ -1.73
SKP1-202ENST00000353411 LIPT2A6NK58 231 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 PEX7O00628 323 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 SP9P0CG40 484 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 CACNG7P62955 275 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 CEACAM21Q3KPI0 293 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 ZNF658BQ4V348 819 aaPredicted RBP4.26□□□□□ -1.73
SKP1-202ENST00000353411 FAM166AQ6J272 317 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 RRHO14718 337 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 CD38P28907 300 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 FAM78AQ5JUQ0 283 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 OR9G1Q8NH87 305 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 IFI27L1Q96BM0 104 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 NABP2Q9BQ15 211 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 KIAA1671Q9BY89 1806 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 ZG16O60844 167 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 CD40P25942 277 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 UCNP55089 124 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 KLRD1Q13241 179 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 KIR3DL3Q8N743 410 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 SRSF12Q8WXF0 261 aaKnown RBP4.26□□□□□ -1.73
SKP1-202ENST00000353411 MBNL3Q9NUK0 354 aaKnown RBP4.26□□□□□ -1.73
SKP1-202ENST00000353411 HCFC2Q9Y5Z7 792 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 IGHV1-24A0A0C4DH33 117 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 CENPVL1A0A0U1RR11 272 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 TEX48A0A1B0GUV7 120 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 C22orf46C9J442 243 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 PPP1R17O96001 155 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 NAPSAO96009 420 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 DNAL4O96015 105 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 CT62P0C5K7 136 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 NXT2Q9NPJ8 142 aaKnown RBP4.26□□□□□ -1.73
SKP1-202ENST00000353411 SAP30O75446 220 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 CGAP01215 116 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 CFIP05156 583 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 GZMHP20718 246 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 RUNX3Q13761 415 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 ATXN8Q156A1 80 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 PRSS41Q7RTY9 318 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 FOXC2Q99958 501 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 C11orf68Q9H3H3 251 aaKnown RBP4.26□□□□□ -1.73
SKP1-202ENST00000353411 ONECUT1Q9UBC0 465 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 YPEL1O60688 119 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 MRPS21P82921 87 aaKnown RBP4.26□□□□□ -1.73
SKP1-202ENST00000353411 PLAURQ03405 335 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 CCL14Q16627 93 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 C18orf32Q8TCD1 76 aa4.26□□□□□ -1.73
SKP1-202ENST00000353411 YPEL2Q96QA6 119 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms