RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 RPUSD1Q9UJJ7 312 aaKnown RBP8.5□□□□□ -1.05
SMPD4-201ENST00000351288 PRNDQ9UKY0 176 aa8.5□□□□□ -1.05
SMPD4-201ENST00000351288 SUB1P53999 127 aaKnown RBP eCLIP8.5□□□□□ -1.059e-7■■■□□ 17.7
SMPD4-201ENST00000351288 LYZP61626 148 aa8.5□□□□□ -1.05
SMPD4-201ENST00000351288 EIF4EBP1Q13541 118 aaPredicted RBP8.5□□□□□ -1.05
SMPD4-201ENST00000351288 GUSBP1Q15486 140 aa8.5□□□□□ -1.05
SMPD4-201ENST00000351288 C17orf58Q2M2W7 97 aa8.5□□□□□ -1.05
SMPD4-201ENST00000351288 OR9G1Q8NH87 305 aa8.5□□□□□ -1.05
SMPD4-201ENST00000351288 TMEM170AQ8WVE7 144 aa8.5□□□□□ -1.05
SMPD4-201ENST00000351288 EAF1Q96JC9 268 aaPredicted RBP8.5□□□□□ -1.05
SMPD4-201ENST00000351288 NAT8Q9UHE5 227 aa8.5□□□□□ -1.05
SMPD4-201ENST00000351288 ZNF835Q9Y2P0 537 aa8.5□□□□□ -1.05
SMPD4-201ENST00000351288 TRAV1-1A0A0B4J248 108 aa8.49□□□□□ -1.05
SMPD4-201ENST00000351288 IGHV3-23P01764 117 aa8.49□□□□□ -1.05
SMPD4-201ENST00000351288 P0C879 139 aa8.49□□□□□ -1.05
SMPD4-201ENST00000351288 ATP6V1FQ16864 119 aa8.49□□□□□ -1.05
SMPD4-201ENST00000351288 TREML4Q6UXN2 200 aa8.49□□□□□ -1.05
SMPD4-201ENST00000351288 GSX1Q9H4S2 264 aaPredicted RBP8.49□□□□□ -1.05
SMPD4-201ENST00000351288 ZNF320A2RRD8 509 aa8.49□□□□□ -1.05
SMPD4-201ENST00000351288 ZNF705GA8MUZ8 300 aaPredicted RBP8.49□□□□□ -1.05
SMPD4-201ENST00000351288 LOXL3P58215 753 aa8.49□□□□□ -1.05
SMPD4-201ENST00000351288 RANP62826 216 aaKnown RBP8.49□□□□□ -1.05
SMPD4-201ENST00000351288 C1QL4Q86Z23 238 aa8.49□□□□□ -1.05
SMPD4-201ENST00000351288 LINC00312Q9Y6C7 94 aa8.49□□□□□ -1.05
SMPD4-201ENST00000351288 HIVEP2P31629 2446 aa8.49□□□□□ -1.05
SMPD4-201ENST00000351288 IGLV3-9A0A075B6K5 115 aa8.49□□□□□ -1.05
SMPD4-201ENST00000351288 A0A087WWC5 75 aa8.49□□□□□ -1.05
SMPD4-201ENST00000351288 SCO2A0A1W2PP80 73 aa8.49□□□□□ -1.05
SMPD4-201ENST00000351288 PPP5D1E7EU14 171 aa8.49□□□□□ -1.05
SMPD4-201ENST00000351288 NDUFS6O75380 124 aaKnown RBP8.49□□□□□ -1.05
SMPD4-201ENST00000351288 DPPA3Q6W0C5 159 aa8.49□□□□□ -1.05
SMPD4-201ENST00000351288 HIST3H2BBQ8N257 126 aa8.49□□□□□ -1.05
SMPD4-201ENST00000351288 MALSU1Q96EH3 234 aa8.49□□□□□ -1.05
SMPD4-201ENST00000351288 NEIL1Q96FI4 390 aaPredicted RBP8.49□□□□□ -1.05
SMPD4-201ENST00000351288 MGST2Q99735 147 aa8.49□□□□□ -1.05
SMPD4-201ENST00000351288 LINC00869P0C866 280 aa8.48□□□□□ -1.05
SMPD4-201ENST00000351288 UBE2L3P68036 154 aaKnown RBP8.48□□□□□ -1.05
SMPD4-201ENST00000351288 STPG3Q8N7X2 389 aa8.48□□□□□ -1.05
SMPD4-201ENST00000351288 RAI1Q7Z5J4 1906 aaPredicted RBP8.48□□□□□ -1.05
SMPD4-201ENST00000351288 DSCAML1Q8TD84 2053 aa8.48□□□□□ -1.05
SMPD4-201ENST00000351288 IGHV3OR16-13A0A075B7E8 117 aa8.48□□□□□ -1.05
SMPD4-201ENST00000351288 IGHV3-74A0A0B4J1X5 117 aa8.48□□□□□ -1.05
SMPD4-201ENST00000351288 FAM90A26D6RGX4 464 aa8.48□□□□□ -1.05
SMPD4-201ENST00000351288 F6UZH7 168 aa8.48□□□□□ -1.05
SMPD4-201ENST00000351288 SLC17A3O00476 420 aa8.48□□□□□ -1.05
SMPD4-201ENST00000351288 PHOX2AO14813 284 aa8.48□□□□□ -1.05
SMPD4-201ENST00000351288 FRMD6-AS1P0C7T7 363 aa8.48□□□□□ -1.05
SMPD4-201ENST00000351288 CT45A6P0DMU7 189 aa8.48□□□□□ -1.05
SMPD4-201ENST00000351288 CT45A5P0DMU8 189 aa8.48□□□□□ -1.05
SMPD4-201ENST00000351288 CT45A7P0DMV0 189 aa8.48□□□□□ -1.05
SMPD4-201ENST00000351288 KIR2DS2P43631 304 aa8.48□□□□□ -1.05
SMPD4-201ENST00000351288 RHOBP62745 196 aa8.48□□□□□ -1.05
SMPD4-201ENST00000351288 LEMD1Q68G75 181 aa8.48□□□□□ -1.05
SMPD4-201ENST00000351288 OR4C13Q8NGP0 309 aa8.48□□□□□ -1.05
SMPD4-201ENST00000351288 DIRC2Q96SL1 478 aa8.48□□□□□ -1.05
SMPD4-201ENST00000351288 TMUB1Q9BVT8 246 aa8.48□□□□□ -1.05
SMPD4-201ENST00000351288 OR51M1Q9H341 326 aa8.48□□□□□ -1.05
SMPD4-201ENST00000351288 WASHC3Q9Y3C0 194 aa8.48□□□□□ -1.05
SMPD4-201ENST00000351288 SRRM4A7MD48 611 aaKnown RBP8.48□□□□□ -1.05
SMPD4-201ENST00000351288 CNTFRP26992 372 aa8.48□□□□□ -1.05
SMPD4-201ENST00000351288 RPL27AP46776 148 aaKnown RBP8.48□□□□□ -1.05
SMPD4-201ENST00000351288 ERVFC1-1P60608 527 aa8.48□□□□□ -1.05
SMPD4-201ENST00000351288 CDSNQ15517 529 aa8.48□□□□□ -1.05
SMPD4-201ENST00000351288 KLF17Q5JT82 389 aaPredicted RBP8.48□□□□□ -1.05
SMPD4-201ENST00000351288 KDF1Q8NAX2 398 aaPredicted RBP8.48□□□□□ -1.05
SMPD4-201ENST00000351288 PACRGQ96M98 296 aaPredicted RBP8.48□□□□□ -1.05
SMPD4-201ENST00000351288 CTSZQ9UBR2 303 aa8.48□□□□□ -1.05
SMPD4-201ENST00000351288 SELENOKQ9Y6D0 94 aa8.48□□□□□ -1.05
SMPD4-201ENST00000351288 TRBV20OR9-2A0A075B6H5 130 aa8.47□□□□□ -1.05
SMPD4-201ENST00000351288 IGKV3-7A0A075B6H7 116 aa8.47□□□□□ -1.05
SMPD4-201ENST00000351288 XKRY2A2RUG3 117 aa8.47□□□□□ -1.05
SMPD4-201ENST00000351288 CA7P43166 264 aa8.47□□□□□ -1.05
SMPD4-201ENST00000351288 TDGF1P3P51864 188 aa8.47□□□□□ -1.05
SMPD4-201ENST00000351288 RELBQ01201 579 aa8.47□□□□□ -1.05
SMPD4-201ENST00000351288 CYP2G1PQ6ZSU1 146 aa8.47□□□□□ -1.05
SMPD4-201ENST00000351288 Q8N7P7 452 aa8.47□□□□□ -1.05
SMPD4-201ENST00000351288 TMEM68Q96MH6 324 aa8.47□□□□□ -1.05
SMPD4-201ENST00000351288 IMMP2LQ96T52 175 aa8.47□□□□□ -1.05
SMPD4-201ENST00000351288 HRNRQ86YZ3 2850 aaPredicted RBP8.47□□□□□ -1.05
SMPD4-201ENST00000351288 GRIFINA4D1Z8 144 aa8.47□□□□□ -1.05
SMPD4-201ENST00000351288 SH2D7A6NKC9 451 aaPredicted RBP8.47□□□□□ -1.05
SMPD4-201ENST00000351288 RBFOX2O43251 390 aaKnown RBP eCLIP8.47□□□□□ -1.051e-7■■■■■ 154.7
SMPD4-201ENST00000351288 ZNF90Q03938 601 aa8.47□□□□□ -1.05
SMPD4-201ENST00000351288 OR5I1Q13606 314 aa8.47□□□□□ -1.05
SMPD4-201ENST00000351288 ECSCRQ19T08 205 aa8.47□□□□□ -1.05
SMPD4-201ENST00000351288 TPSG1Q9NRR2 321 aa8.47□□□□□ -1.05
SMPD4-201ENST00000351288 SEC14L6B5MCN3 397 aa8.47□□□□□ -1.05
SMPD4-201ENST00000351288 PNRC1Q12796 327 aaPredicted RBP8.47□□□□□ -1.05
SMPD4-201ENST00000351288 MIR17HGQ75NE6 70 aa8.47□□□□□ -1.05
SMPD4-201ENST00000351288 IL6RP08887 468 aaPredicted RBP8.46□□□□□ -1.05
SMPD4-201ENST00000351288 HIST1H2BLQ99880 126 aa8.46□□□□□ -1.05
SMPD4-201ENST00000351288 GGTLC1Q9BX51 225 aa8.46□□□□□ -1.05
SMPD4-201ENST00000351288 CLEC7AQ9BXN2 247 aa8.46□□□□□ -1.05
SMPD4-201ENST00000351288 IGHV2-70P01814 119 aa8.46□□□□□ -1.06
SMPD4-201ENST00000351288 PFN1P07737 140 aaKnown RBP8.46□□□□□ -1.06
SMPD4-201ENST00000351288 PPOXP50336 477 aa8.46□□□□□ -1.06
SMPD4-201ENST00000351288 VSTM2AQ8TAG5 236 aa8.46□□□□□ -1.06
SMPD4-201ENST00000351288 NABP2Q9BQ15 211 aa8.46□□□□□ -1.06
SMPD4-201ENST00000351288 TCEAL7Q9BRU2 100 aa8.46□□□□□ -1.06
SMPD4-201ENST00000351288 LINC00527Q9UJ94 153 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms