RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 SIRT4Q9Y6E7 314 aaPredicted RBP10.02□□□□□ -0.81
TRAF3-201ENST00000347662 IGKV1D-16P01601 117 aa10.02□□□□□ -0.81
TRAF3-201ENST00000347662 ZG16O60844 167 aa10.02□□□□□ -0.81
TRAF3-201ENST00000347662 ZNF585BQ52M93 769 aa10.02□□□□□ -0.81
TRAF3-201ENST00000347662 FGFRL1Q8N441 504 aa10.02□□□□□ -0.81
TRAF3-201ENST00000347662 OR9G1Q8NH87 305 aa10.02□□□□□ -0.81
TRAF3-201ENST00000347662 TAF15Q92804 592 aaKnown RBP eCLIP10.02□□□□□ -0.81
TRAF3-201ENST00000347662 PTPRFP10586 1907 aa10.02□□□□□ -0.81
TRAF3-201ENST00000347662 NHP2Q9NX24 153 aaKnown RBP10.02□□□□□ -0.81
TRAF3-201ENST00000347662 CTDSPLO15194 276 aa10.01□□□□□ -0.81
TRAF3-201ENST00000347662 TNFRSF6BO95407 300 aa10.01□□□□□ -0.81
TRAF3-201ENST00000347662 LINC00299Q6ZSB3 139 aa10.01□□□□□ -0.81
TRAF3-201ENST00000347662 ODAMA1E959 279 aa10.01□□□□□ -0.81
TRAF3-201ENST00000347662 IGHV3-53P01767 116 aa10.01□□□□□ -0.81
TRAF3-201ENST00000347662 CYP2G1PQ6ZSU1 146 aa10.01□□□□□ -0.81
TRAF3-201ENST00000347662 COQ2Q96H96 371 aa10.01□□□□□ -0.81
TRAF3-201ENST00000347662 CBLN1P23435 193 aa10.01□□□□□ -0.81
TRAF3-201ENST00000347662 FER1L6-AS1Q8NA97 138 aa10.01□□□□□ -0.81
TRAF3-201ENST00000347662 FBXL15Q9H469 300 aa10.01□□□□□ -0.81
TRAF3-201ENST00000347662 CXCL3P19876 107 aa10.01□□□□□ -0.81
TRAF3-201ENST00000347662 OCIAD2Q56VL3 154 aa10.01□□□□□ -0.81
TRAF3-201ENST00000347662 ARPC1AQ92747 370 aa10.01□□□□□ -0.81
TRAF3-201ENST00000347662 TMEM186Q96B77 213 aa10.01□□□□□ -0.81
TRAF3-201ENST00000347662 PGPEP1LA6NFU8 196 aa10.01□□□□□ -0.81
TRAF3-201ENST00000347662 NCR2O95944 276 aa10.01□□□□□ -0.81
TRAF3-201ENST00000347662 FGF12P61328 243 aa10.01□□□□□ -0.81
TRAF3-201ENST00000347662 LY6DQ14210 128 aa10.01□□□□□ -0.81
TRAF3-201ENST00000347662 GPR146Q96CH1 333 aa10.01□□□□□ -0.81
TRAF3-201ENST00000347662 P2RY6Q15077 328 aa10.01□□□□□ -0.81
TRAF3-201ENST00000347662 ABHD17AQ96GS6 310 aa10.01□□□□□ -0.81
TRAF3-201ENST00000347662 C5orf47Q569G3 176 aa10□□□□□ -0.81
TRAF3-201ENST00000347662 C3orf56Q8N813 242 aa10□□□□□ -0.81
TRAF3-201ENST00000347662 DLX4Q92988 240 aaPredicted RBP10□□□□□ -0.81
TRAF3-201ENST00000347662 ZNF703Q9H7S9 590 aaPredicted RBP10□□□□□ -0.81
TRAF3-201ENST00000347662 A0A1W2PR77 199 aa10□□□□□ -0.81
TRAF3-201ENST00000347662 SIGLEC5O15389 551 aa10□□□□□ -0.81
TRAF3-201ENST00000347662 MARVELD1Q9BSK0 173 aa10□□□□□ -0.81
TRAF3-201ENST00000347662 SNHG12Q9BXW3 62 aa10□□□□□ -0.81
TRAF3-201ENST00000347662 MYOD1P15172 320 aa10□□□□□ -0.81
TRAF3-201ENST00000347662 HSPE1P61604 102 aaKnown RBP10□□□□□ -0.81
TRAF3-201ENST00000347662 MDS2Q8NDY4 140 aa10□□□□□ -0.81
TRAF3-201ENST00000347662 TMEM54Q969K7 222 aa10□□□□□ -0.81
TRAF3-201ENST00000347662 FXYD7P58549 80 aa10□□□□□ -0.81
TRAF3-201ENST00000347662 PSG4Q00888 419 aa10□□□□□ -0.81
TRAF3-201ENST00000347662 MRPL32Q9BYC8 188 aaKnown RBP10□□□□□ -0.81
TRAF3-201ENST00000347662 MARCH11A6NNE9 402 aa10□□□□□ -0.81
TRAF3-201ENST00000347662 H3BUT2 72 aa10□□□□□ -0.81
TRAF3-201ENST00000347662 LHX2P50458 406 aa10□□□□□ -0.81
TRAF3-201ENST00000347662 FUT5Q11128 374 aa10□□□□□ -0.81
TRAF3-201ENST00000347662 NACAE9PAV3 2078 aa10□□□□□ -0.81
TRAF3-201ENST00000347662 PRTN3P24158 256 aa10□□□□□ -0.81
TRAF3-201ENST00000347662 FBLN7Q53RD9 439 aa10□□□□□ -0.81
TRAF3-201ENST00000347662 MORN3Q6PF18 240 aaPredicted RBP10□□□□□ -0.81
TRAF3-201ENST00000347662 KLF12Q9Y4X4 402 aa10□□□□□ -0.81
TRAF3-201ENST00000347662 GALP22466 123 aa9.99□□□□□ -0.81
TRAF3-201ENST00000347662 ZP4Q12836 540 aa9.99□□□□□ -0.81
TRAF3-201ENST00000347662 HAPLN4Q86UW8 402 aa9.99□□□□□ -0.81
TRAF3-201ENST00000347662 CHTOPQ9Y3Y2 248 aaKnown RBP9.99□□□□□ -0.81
TRAF3-201ENST00000347662 C1QAP02745 245 aa9.99□□□□□ -0.81
TRAF3-201ENST00000347662 C1QCP02747 245 aa9.99□□□□□ -0.81
TRAF3-201ENST00000347662 FAM181AQ8N9Y4 354 aa9.99□□□□□ -0.81
TRAF3-201ENST00000347662 PRSS22Q9GZN4 317 aa9.99□□□□□ -0.81
TRAF3-201ENST00000347662 KLK13Q9UKR3 277 aa9.99□□□□□ -0.81
TRAF3-201ENST00000347662 NDUFS8O00217 210 aa9.99□□□□□ -0.81
TRAF3-201ENST00000347662 CCL1P22362 96 aa9.99□□□□□ -0.81
TRAF3-201ENST00000347662 CITED1Q99966 193 aa9.99□□□□□ -0.81
TRAF3-201ENST00000347662 TRBV9A0A0B4J1U6 114 aa9.99□□□□□ -0.81
TRAF3-201ENST00000347662 ZNF146Q15072 292 aa9.99□□□□□ -0.81
TRAF3-201ENST00000347662 PILRAQ9UKJ1 303 aa9.99□□□□□ -0.81
TRAF3-201ENST00000347662 COX6A1P12074 109 aa9.99□□□□□ -0.81
TRAF3-201ENST00000347662 APOBEC3AP31941 199 aaPredicted RBP9.99□□□□□ -0.81
TRAF3-201ENST00000347662 ELOVL5Q9NYP7 299 aa9.99□□□□□ -0.81
TRAF3-201ENST00000347662 TRAV8-1A0A0A6YYK1 113 aa9.98□□□□□ -0.81
TRAF3-201ENST00000347662 CRIM1Q9NZV1 1036 aa9.98□□□□□ -0.81
TRAF3-201ENST00000347662 B9A039 149 aa9.98□□□□□ -0.81
TRAF3-201ENST00000347662 TNFRSF9Q07011 255 aa9.98□□□□□ -0.81
TRAF3-201ENST00000347662 C6orf226Q5I0X4 101 aa9.98□□□□□ -0.81
TRAF3-201ENST00000347662 TRAV25A0A0B4J276 109 aa9.98□□□□□ -0.81
TRAF3-201ENST00000347662 PGLYRP1O75594 196 aaPredicted RBP9.98□□□□□ -0.81
TRAF3-201ENST00000347662 A0A1B0GUT8 65 aa9.98□□□□□ -0.81
TRAF3-201ENST00000347662 C1QL1O75973 258 aa9.98□□□□□ -0.81
TRAF3-201ENST00000347662 DDTP30046 118 aa9.98□□□□□ -0.81
TRAF3-201ENST00000347662 PPIFP30405 207 aaKnown RBP9.98□□□□□ -0.81
TRAF3-201ENST00000347662 PTP4A3O75365 173 aa9.98□□□□□ -0.81
TRAF3-201ENST00000347662 PRB4P10163 310 aaPredicted RBP9.98□□□□□ -0.81
TRAF3-201ENST00000347662 ZNF79Q15937 498 aa9.98□□□□□ -0.81
TRAF3-201ENST00000347662 OR11H7Q8NGC8 314 aa9.98□□□□□ -0.81
TRAF3-201ENST00000347662 NBEAP1P0C6P0 100 aa9.98□□□□□ -0.81
TRAF3-201ENST00000347662 ZFAND6Q6FIF0 208 aa9.98□□□□□ -0.81
TRAF3-201ENST00000347662 TRAV41A0A0B4J266 112 aa9.97□□□□□ -0.81
TRAF3-201ENST00000347662 GCM2O75603 506 aaPredicted RBP9.97□□□□□ -0.81
TRAF3-201ENST00000347662 GP6Q9HCN6 339 aa9.97□□□□□ -0.81
TRAF3-201ENST00000347662 ERG28Q9UKR5 140 aa9.97□□□□□ -0.81
TRAF3-201ENST00000347662 ORMDL3Q8N138 153 aa9.97□□□□□ -0.81
TRAF3-201ENST00000347662 FAM19A2Q8N3H0 131 aa9.97□□□□□ -0.81
TRAF3-201ENST00000347662 A8MWV9 139 aa9.97□□□□□ -0.81
TRAF3-201ENST00000347662 FGF9P31371 208 aaPredicted RBP9.97□□□□□ -0.81
TRAF3-201ENST00000347662 TBR1Q16650 682 aa9.97□□□□□ -0.81
TRAF3-201ENST00000347662 ZNF646O15015 1829 aaPredicted RBP9.97□□□□□ -0.81
TRAF3-201ENST00000347662 HOGA1Q86XE5 327 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms