RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 IGKV1-39P01597 117 aa13.3□□□□□ -0.28
CKLF-202ENST00000345436 IGKV1D-39P04432 117 aa13.3□□□□□ -0.28
CKLF-202ENST00000345436 SMIM18P0DKX4 95 aa13.3□□□□□ -0.28
CKLF-202ENST00000345436 PI3P19957 117 aa13.3□□□□□ -0.28
CKLF-202ENST00000345436 PAFAH1B2P68402 229 aa13.3□□□□□ -0.28
CKLF-202ENST00000345436 ABHD1Q96SE0 405 aa13.3□□□□□ -0.28
CKLF-202ENST00000345436 FAM110AQ9BQ89 295 aa13.3□□□□□ -0.28
CKLF-202ENST00000345436 RETNQ9HD89 108 aa13.3□□□□□ -0.28
CKLF-202ENST00000345436 CACFD1Q9UGQ2 172 aa13.3□□□□□ -0.28
CKLF-202ENST00000345436 SMPXQ9UHP9 88 aa13.3□□□□□ -0.28
CKLF-202ENST00000345436 HUWE1Q7Z6Z7 4374 aaKnown RBP13.3□□□□□ -0.28
CKLF-202ENST00000345436 TRAV14DV4A0A0A6YYC5 116 aa13.29□□□□□ -0.28
CKLF-202ENST00000345436 LCE6AA0A183 80 aa13.29□□□□□ -0.28
CKLF-202ENST00000345436 I3L2K1 104 aa13.29□□□□□ -0.28
CKLF-202ENST00000345436 NOL3O60936 208 aaKnown RBP13.29□□□□□ -0.28
CKLF-202ENST00000345436 JTBO76095 146 aa13.29□□□□□ -0.28
CKLF-202ENST00000345436 CD74P04233 296 aa13.29□□□□□ -0.28
CKLF-202ENST00000345436 ADMP35318 185 aa13.29□□□□□ -0.28
CKLF-202ENST00000345436 PPP5CP53041 499 aa13.29□□□□□ -0.28
CKLF-202ENST00000345436 FAM219AQ8IW50 185 aa13.29□□□□□ -0.28
CKLF-202ENST00000345436 TMEM116Q8NCL8 245 aa13.29□□□□□ -0.28
CKLF-202ENST00000345436 NXF2Q9GZY0 626 aaKnown RBP13.29□□□□□ -0.28
CKLF-202ENST00000345436 TEX13DA0A0J9YY54 714 aaPredicted RBP13.28□□□□□ -0.28
CKLF-202ENST00000345436 INS-IGF2F8WCM5 200 aa13.28□□□□□ -0.28
CKLF-202ENST00000345436 CTSDP07339 412 aaPredicted RBP13.28□□□□□ -0.28
CKLF-202ENST00000345436 STPG3Q8N7X2 389 aa13.28□□□□□ -0.28
CKLF-202ENST00000345436 RAB2BQ8WUD1 216 aa13.28□□□□□ -0.28
CKLF-202ENST00000345436 TP53RKQ96S44 253 aa13.28□□□□□ -0.28
CKLF-202ENST00000345436 BCL7BQ9BQE9 202 aa13.28□□□□□ -0.28
CKLF-202ENST00000345436 RHPN1-AS1Q9BWJ2 59 aa13.28□□□□□ -0.28
CKLF-202ENST00000345436 TP53TG1Q9Y2A0 90 aa13.28□□□□□ -0.28
CKLF-202ENST00000345436 KIR2DL5BA0A0G2JN68 375 aa13.27□□□□□ -0.29
CKLF-202ENST00000345436 KIR2DL5BA0A0G2JPC4 375 aa13.27□□□□□ -0.29
CKLF-202ENST00000345436 IGHV7-4-1A0A0J9YVY3 117 aa13.27□□□□□ -0.29
CKLF-202ENST00000345436 F8W735 103 aaPredicted RBP13.27□□□□□ -0.29
CKLF-202ENST00000345436 ZNF207O43670 478 aaKnown RBP13.27□□□□□ -0.29
CKLF-202ENST00000345436 ALDH3B2P48448 385 aa13.27□□□□□ -0.29
CKLF-202ENST00000345436 HOXA1P49639 335 aaPredicted RBP13.27□□□□□ -0.29
CKLF-202ENST00000345436 DHODHQ02127 395 aa13.27□□□□□ -0.29
CKLF-202ENST00000345436 SURF2Q15527 256 aaPredicted RBP13.27□□□□□ -0.29
CKLF-202ENST00000345436 Q6ZWC4 215 aa13.27□□□□□ -0.29
CKLF-202ENST00000345436 KIR2DL5AQ8N109 375 aa13.27□□□□□ -0.29
CKLF-202ENST00000345436 OR13C8Q8NGS7 320 aa13.27□□□□□ -0.29
CKLF-202ENST00000345436 KIR2DL5BQ8NHK3 375 aa13.27□□□□□ -0.29
CKLF-202ENST00000345436 GALNT14Q96FL9 552 aa13.27□□□□□ -0.29
CKLF-202ENST00000345436 DIRAS2Q96HU8 199 aa13.27□□□□□ -0.29
CKLF-202ENST00000345436 OR10C1Q96KK4 312 aa13.27□□□□□ -0.29
CKLF-202ENST00000345436 SCGB3A2Q96PL1 93 aa13.27□□□□□ -0.29
CKLF-202ENST00000345436 TMEM231Q9H6L2 316 aa13.27□□□□□ -0.29
CKLF-202ENST00000345436 IGHV3OR16-8A0A075B7F1 116 aa13.26□□□□□ -0.29
CKLF-202ENST00000345436 A0A0B4J293 547 aa13.26□□□□□ -0.29
CKLF-202ENST00000345436 CHEK1O14757 476 aa13.26□□□□□ -0.29
CKLF-202ENST00000345436 ST8SIA3O43173 380 aa13.26□□□□□ -0.29
CKLF-202ENST00000345436 IGKV1-5P01602 117 aa13.26□□□□□ -0.29
CKLF-202ENST00000345436 UCP1P25874 307 aa13.26□□□□□ -0.29
CKLF-202ENST00000345436 TMBIM6P55061 237 aa13.26□□□□□ -0.29
CKLF-202ENST00000345436 IL18Q14116 193 aa13.26□□□□□ -0.29
CKLF-202ENST00000345436 CLVS1Q8IUQ0 354 aaPredicted RBP13.26□□□□□ -0.29
CKLF-202ENST00000345436 MARCH1Q8TCQ1 289 aa13.26□□□□□ -0.29
CKLF-202ENST00000345436 PRRT1Q99946 306 aa13.26□□□□□ -0.29
CKLF-202ENST00000345436 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.26□□□□□ -0.29
CKLF-202ENST00000345436 RSL24D1Q9UHA3 163 aaKnown RBP13.26□□□□□ -0.29
CKLF-202ENST00000345436 CTDSPLO15194 276 aa13.25□□□□□ -0.29
CKLF-202ENST00000345436 AKAIN1P0CW23 69 aa13.25□□□□□ -0.29
CKLF-202ENST00000345436 SPCS3P61009 180 aa13.25□□□□□ -0.29
CKLF-202ENST00000345436 SP6Q3SY56 376 aa13.25□□□□□ -0.29
CKLF-202ENST00000345436 ZNF600Q6ZNG1 722 aa13.25□□□□□ -0.29
CKLF-202ENST00000345436 SMIM4Q8WVI0 70 aa13.25□□□□□ -0.29
CKLF-202ENST00000345436 NARS2Q96I59 477 aaKnown RBP13.25□□□□□ -0.29
CKLF-202ENST00000345436 UBQLN2Q9UHD9 624 aa13.25□□□□□ -0.29
CKLF-202ENST00000345436 KCNIP3Q9Y2W7 256 aa13.25□□□□□ -0.29
CKLF-202ENST00000345436 PIGBOS1A0A0B4J2F0 54 aa13.24□□□□□ -0.29
CKLF-202ENST00000345436 RPS10-NUDT3A0A1W2PQS6 291 aa13.24□□□□□ -0.29
CKLF-202ENST00000345436 A0A1W2PS18 150 aa13.24□□□□□ -0.29
CKLF-202ENST00000345436 CTDSP2O14595 271 aa13.24□□□□□ -0.29
CKLF-202ENST00000345436 SPRY2O43597 315 aa13.24□□□□□ -0.29
CKLF-202ENST00000345436 ETV6P41212 452 aa13.24□□□□□ -0.29
CKLF-202ENST00000345436 SPINK9Q5DT21 86 aa13.24□□□□□ -0.29
CKLF-202ENST00000345436 NOXA1Q86UR1 476 aa13.24□□□□□ -0.29
CKLF-202ENST00000345436 TMEM217Q8N7C4 229 aa13.24□□□□□ -0.29
CKLF-202ENST00000345436 OR4D10Q8NGI6 311 aa13.24□□□□□ -0.29
CKLF-202ENST00000345436 OR52E5Q8NH55 327 aa13.24□□□□□ -0.29
CKLF-202ENST00000345436 RNF2Q99496 336 aa13.24□□□□□ -0.29
CKLF-202ENST00000345436 OVOL2Q9BRP0 275 aa13.24□□□□□ -0.29
CKLF-202ENST00000345436 TMEM222Q9H0R3 208 aa13.24□□□□□ -0.29
CKLF-202ENST00000345436 MIXL1Q9H2W2 232 aa13.24□□□□□ -0.29
CKLF-202ENST00000345436 CCDC59Q9P031 241 aaKnown RBP13.24□□□□□ -0.29
CKLF-202ENST00000345436 SCP2D1Q9UJQ7 156 aa13.24□□□□□ -0.29
CKLF-202ENST00000345436 TRAV30A0A087WSZ9 112 aa13.23□□□□□ -0.29
CKLF-202ENST00000345436 DNASE2O00115 360 aaPredicted RBP13.23□□□□□ -0.29
CKLF-202ENST00000345436 CDS2O95674 445 aa13.23□□□□□ -0.29
CKLF-202ENST00000345436 IGHV3-48P01763 117 aa13.23□□□□□ -0.29
CKLF-202ENST00000345436 P0C879 139 aa13.23□□□□□ -0.29
CKLF-202ENST00000345436 OPRK1P41145 380 aa13.23□□□□□ -0.29
CKLF-202ENST00000345436 HTR2BP41595 481 aa13.23□□□□□ -0.29
CKLF-202ENST00000345436 RPL5P46777 297 aaKnown RBP13.23□□□□□ -0.29
CKLF-202ENST00000345436 SPCS2Q15005 226 aa13.23□□□□□ -0.29
CKLF-202ENST00000345436 IZUMO4Q1ZYL8 232 aa13.23□□□□□ -0.29
CKLF-202ENST00000345436 WFDC3Q8IUB2 231 aa13.23□□□□□ -0.29
CKLF-202ENST00000345436 RBPMSQ93062 196 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms