RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 GRAMD2BQ96HH9 432 aa11.61□□□□□ -0.55
NECTIN1-202ENST00000340882 COMMD9Q9P000 198 aa11.61□□□□□ -0.55
NECTIN1-202ENST00000340882 XCL2Q9UBD3 114 aa11.61□□□□□ -0.55
NECTIN1-202ENST00000340882 PUS1Q9Y606 427 aaKnown RBP eCLIP11.61□□□□□ -0.55
NECTIN1-202ENST00000340882 GNG7O60262 68 aa11.6□□□□□ -0.55
NECTIN1-202ENST00000340882 KRASP01116 189 aa11.6□□□□□ -0.55
NECTIN1-202ENST00000340882 PSMA1P25786 263 aaKnown RBP11.6□□□□□ -0.55
NECTIN1-202ENST00000340882 G6PCP35575 357 aa11.6□□□□□ -0.55
NECTIN1-202ENST00000340882 RANBP1P43487 201 aa11.6□□□□□ -0.55
NECTIN1-202ENST00000340882 EMP1P54849 157 aa11.6□□□□□ -0.55
NECTIN1-202ENST00000340882 ARL6IP1Q15041 203 aa11.6□□□□□ -0.55
NECTIN1-202ENST00000340882 RCN1Q15293 331 aa11.6□□□□□ -0.55
NECTIN1-202ENST00000340882 AADACL3Q5VUY0 350 aa11.6□□□□□ -0.55
NECTIN1-202ENST00000340882 ZNF367Q7RTV3 350 aa11.6□□□□□ -0.55
NECTIN1-202ENST00000340882 RAB40CQ96S21 281 aa11.6□□□□□ -0.55
NECTIN1-202ENST00000340882 MYCBP2O75592 4640 aa11.6□□□□□ -0.55
NECTIN1-202ENST00000340882 FCER2P06734 321 aa11.59□□□□□ -0.55
NECTIN1-202ENST00000340882 SPART-AS1P0CW21 52 aa11.59□□□□□ -0.55
NECTIN1-202ENST00000340882 GNG2P59768 71 aa11.59□□□□□ -0.55
NECTIN1-202ENST00000340882 MLLT11Q13015 90 aaPredicted RBP11.59□□□□□ -0.55
NECTIN1-202ENST00000340882 PACRGLQ8N7B6 248 aa11.59□□□□□ -0.55
NECTIN1-202ENST00000340882 FCAMRQ8WWV6 532 aa11.59□□□□□ -0.55
NECTIN1-202ENST00000340882 PINX1Q96BK5 328 aaKnown RBP11.59□□□□□ -0.55
NECTIN1-202ENST00000340882 FAM210BQ96KR6 192 aa11.59□□□□□ -0.55
NECTIN1-202ENST00000340882 TRAV1-2A0A0B4J238 106 aa11.58□□□□□ -0.56
NECTIN1-202ENST00000340882 ERICH4A6NGS2 130 aa11.58□□□□□ -0.56
NECTIN1-202ENST00000340882 PDCD5O14737 125 aa11.58□□□□□ -0.56
NECTIN1-202ENST00000340882 HTN3P15516 51 aa11.58□□□□□ -0.56
NECTIN1-202ENST00000340882 LPAR6P43657 344 aa11.58□□□□□ -0.56
NECTIN1-202ENST00000340882 PPP5CP53041 499 aa11.58□□□□□ -0.56
NECTIN1-202ENST00000340882 ARPC4P59998 168 aa11.58□□□□□ -0.56
NECTIN1-202ENST00000340882 ERVK-16P61578 105 aa11.58□□□□□ -0.56
NECTIN1-202ENST00000340882 SPATA12Q7Z6I5 190 aa11.58□□□□□ -0.56
NECTIN1-202ENST00000340882 TMEM17Q86X19 198 aa11.58□□□□□ -0.56
NECTIN1-202ENST00000340882 BEST4Q8NFU0 473 aa11.58□□□□□ -0.56
NECTIN1-202ENST00000340882 TMEM56Q96MV1 263 aa11.58□□□□□ -0.56
NECTIN1-202ENST00000340882 ACOT13Q9NPJ3 140 aa11.58□□□□□ -0.56
NECTIN1-202ENST00000340882 RAB3BP20337 219 aa11.57□□□□□ -0.56
NECTIN1-202ENST00000340882 GNRHRP30968 328 aa11.57□□□□□ -0.56
NECTIN1-202ENST00000340882 P2RY1P47900 373 aa11.57□□□□□ -0.56
NECTIN1-202ENST00000340882 TMEM88Q6PEY1 159 aa11.57□□□□□ -0.56
NECTIN1-202ENST00000340882 ZNF705AQ6ZN79 300 aaPredicted RBP11.57□□□□□ -0.56
NECTIN1-202ENST00000340882 ZNF600Q6ZNG1 722 aa11.57□□□□□ -0.56
NECTIN1-202ENST00000340882 C6orf223Q8N319 242 aa11.57□□□□□ -0.56
NECTIN1-202ENST00000340882 MGLLQ99685 303 aa11.57□□□□□ -0.56
NECTIN1-202ENST00000340882 DKK2Q9UBU2 259 aa11.57□□□□□ -0.56
NECTIN1-202ENST00000340882 ZNF705FA8MVS1 300 aaPredicted RBP11.56□□□□□ -0.56
NECTIN1-202ENST00000340882 SNAPC5O75971 98 aa11.56□□□□□ -0.56
NECTIN1-202ENST00000340882 RLN1P04808 185 aa11.56□□□□□ -0.56
NECTIN1-202ENST00000340882 ZNF705DP0CH99 300 aaPredicted RBP11.56□□□□□ -0.56
NECTIN1-202ENST00000340882 ZNF705BP0CI00 300 aaPredicted RBP11.56□□□□□ -0.56
NECTIN1-202ENST00000340882 NPPCP23582 126 aa11.56□□□□□ -0.56
NECTIN1-202ENST00000340882 F2RP25116 425 aa11.56□□□□□ -0.56
NECTIN1-202ENST00000340882 KRTAP10-2P60368 255 aa11.56□□□□□ -0.56
NECTIN1-202ENST00000340882 PSMG4Q5JS54 123 aa11.56□□□□□ -0.56
NECTIN1-202ENST00000340882 FAM222AQ5U5X8 452 aa11.56□□□□□ -0.56
NECTIN1-202ENST00000340882 MOB3AQ96BX8 217 aa11.56□□□□□ -0.56
NECTIN1-202ENST00000340882 YTHDF1Q9BYJ9 559 aaKnown RBP11.56□□□□□ -0.56
NECTIN1-202ENST00000340882 MRPL36Q9P0J6 103 aaKnown RBP11.56□□□□□ -0.56
NECTIN1-202ENST00000340882 NBDYA0A0U1RRE5 68 aa11.55□□□□□ -0.56
NECTIN1-202ENST00000340882 TMEM50AO95807 157 aa11.55□□□□□ -0.56
NECTIN1-202ENST00000340882 CRYBB3P26998 211 aa11.55□□□□□ -0.56
NECTIN1-202ENST00000340882 HOGA1Q86XE5 327 aa11.55□□□□□ -0.56
NECTIN1-202ENST00000340882 ZNF114Q8NC26 417 aa11.55□□□□□ -0.56
NECTIN1-202ENST00000340882 NEU1Q99519 415 aa11.55□□□□□ -0.56
NECTIN1-202ENST00000340882 NIPSNAP3BQ9BS92 247 aa11.55□□□□□ -0.56
NECTIN1-202ENST00000340882 TMEM231Q9H6L2 316 aa11.55□□□□□ -0.56
NECTIN1-202ENST00000340882 PRNDQ9UKY0 176 aa11.55□□□□□ -0.56
NECTIN1-202ENST00000340882 VPS13BQ7Z7G8 4022 aa11.55□□□□□ -0.56
NECTIN1-202ENST00000340882 H3BMM0 161 aa11.54□□□□□ -0.56
NECTIN1-202ENST00000340882 CASQ2O14958 399 aaPredicted RBP11.54□□□□□ -0.56
NECTIN1-202ENST00000340882 PGLYRP1O75594 196 aaPredicted RBP11.54□□□□□ -0.56
NECTIN1-202ENST00000340882 INAFM2P0DMQ5 153 aa11.54□□□□□ -0.56
NECTIN1-202ENST00000340882 CADM3Q8N126 398 aa11.54□□□□□ -0.56
NECTIN1-202ENST00000340882 C1QTNF4Q9BXJ3 329 aa11.54□□□□□ -0.56
NECTIN1-202ENST00000340882 DUSP21Q9H596 190 aa11.54□□□□□ -0.56
NECTIN1-202ENST00000340882 C8orf4Q9NR00 106 aa11.54□□□□□ -0.56
NECTIN1-202ENST00000340882 SCN3BQ9NY72 215 aa11.54□□□□□ -0.56
NECTIN1-202ENST00000340882 IGHV3OR16-12A0A075B7B8 117 aa11.53□□□□□ -0.56
NECTIN1-202ENST00000340882 A0A1W2PS18 150 aa11.53□□□□□ -0.56
NECTIN1-202ENST00000340882 EPM2AB3EWF7 344 aa11.53□□□□□ -0.56
NECTIN1-202ENST00000340882 MYL9P24844 172 aa11.53□□□□□ -0.56
NECTIN1-202ENST00000340882 FXYD7P58549 80 aa11.53□□□□□ -0.56
NECTIN1-202ENST00000340882 DEFB1P60022 68 aa11.53□□□□□ -0.56
NECTIN1-202ENST00000340882 DHRS2Q13268 280 aa11.53□□□□□ -0.56
NECTIN1-202ENST00000340882 TPRA1Q86W33 373 aa11.53□□□□□ -0.56
NECTIN1-202ENST00000340882 ZNRF2Q8NHG8 242 aa11.53□□□□□ -0.56
NECTIN1-202ENST00000340882 RNF167Q9H6Y7 350 aa11.53□□□□□ -0.56
NECTIN1-202ENST00000340882 FKBP11Q9NYL4 201 aa11.53□□□□□ -0.56
NECTIN1-202ENST00000340882 HELTA6NFD8 242 aa11.52□□□□□ -0.57
NECTIN1-202ENST00000340882 FGF9P31371 208 aaPredicted RBP11.52□□□□□ -0.57
NECTIN1-202ENST00000340882 NPBWR1P48145 328 aa11.52□□□□□ -0.57
NECTIN1-202ENST00000340882 SPINK9Q5DT21 86 aa11.52□□□□□ -0.57
NECTIN1-202ENST00000340882 GDF5OSQ5U4N7 250 aa11.52□□□□□ -0.57
NECTIN1-202ENST00000340882 METTL26Q96S19 204 aa11.52□□□□□ -0.57
NECTIN1-202ENST00000340882 CCDC90BQ9GZT6 254 aa11.52□□□□□ -0.57
NECTIN1-202ENST00000340882 TMED3Q9Y3Q3 217 aa11.52□□□□□ -0.57
NECTIN1-202ENST00000340882 FLG2Q5D862 2391 aaPredicted RBP11.52□□□□□ -0.57
NECTIN1-202ENST00000340882 TMEM189A5PLL7 270 aa11.51□□□□□ -0.57
NECTIN1-202ENST00000340882 RGS10O43665 173 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms