RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 LOC105371242A0A075B767 164 aa9.79□□□□□ -0.84
HDAC6-201ENST00000334136 PPIAL4CA0A0B4J2A2 164 aa9.79□□□□□ -0.84
HDAC6-201ENST00000334136 RRHO14718 337 aa9.79□□□□□ -0.84
HDAC6-201ENST00000334136 SMAD7O15105 426 aaKnown RBP9.79□□□□□ -0.84
HDAC6-201ENST00000334136 PPIAL4GP0DN37 164 aa9.79□□□□□ -0.84
HDAC6-201ENST00000334136 GUSBP1Q15486 140 aa9.79□□□□□ -0.84
HDAC6-201ENST00000334136 PDPNQ86YL7 162 aa9.79□□□□□ -0.84
HDAC6-201ENST00000334136 NPCDR1Q9BY65 106 aa9.79□□□□□ -0.84
HDAC6-201ENST00000334136 MLNRO43193 412 aa9.79□□□□□ -0.84
HDAC6-201ENST00000334136 LY6HO94772 140 aa9.79□□□□□ -0.84
HDAC6-201ENST00000334136 OR2T6Q8NHC8 308 aa9.79□□□□□ -0.84
HDAC6-201ENST00000334136 ZNF645Q8N7E2 425 aa9.78□□□□□ -0.84
HDAC6-201ENST00000334136 SCO2A0A1W2PP80 73 aa9.78□□□□□ -0.84
HDAC6-201ENST00000334136 S100A7AQ86SG5 101 aa9.78□□□□□ -0.84
HDAC6-201ENST00000334136 C1QL4Q86Z23 238 aa9.78□□□□□ -0.84
HDAC6-201ENST00000334136 AMMECR1Q9Y4X0 333 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-201ENST00000334136 VPS13AQ96RL7 3174 aa9.78□□□□□ -0.84
HDAC6-201ENST00000334136 IGKV1-27A0A075B6S5 117 aa9.78□□□□□ -0.84
HDAC6-201ENST00000334136 SERF1AO75920 110 aa9.78□□□□□ -0.84
HDAC6-201ENST00000334136 P01737 135 aa9.78□□□□□ -0.84
HDAC6-201ENST00000334136 ADH4P08319 380 aa9.78□□□□□ -0.84
HDAC6-201ENST00000334136 COX19Q49B96 90 aa9.78□□□□□ -0.84
HDAC6-201ENST00000334136 OR4A47Q6IF82 309 aa9.78□□□□□ -0.84
HDAC6-201ENST00000334136 FAM90A26D6RGX4 464 aa9.78□□□□□ -0.84
HDAC6-201ENST00000334136 IGHV2-70P01814 119 aa9.78□□□□□ -0.84
HDAC6-201ENST00000334136 GCSAMLQ5JQS6 135 aa9.78□□□□□ -0.84
HDAC6-201ENST00000334136 TMEM42Q69YG0 159 aa9.78□□□□□ -0.84
HDAC6-201ENST00000334136 FAM90A1Q86YD7 464 aa9.78□□□□□ -0.84
HDAC6-201ENST00000334136 TMSB15BA0A087X1C1 80 aa9.77□□□□□ -0.85
HDAC6-201ENST00000334136 C17orf98A8MV24 154 aa9.77□□□□□ -0.85
HDAC6-201ENST00000334136 ARL16Q0P5N6 197 aa9.77□□□□□ -0.85
HDAC6-201ENST00000334136 CYYR1Q96J86 154 aa9.77□□□□□ -0.85
HDAC6-201ENST00000334136 PARD6GQ9BYG4 376 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-201ENST00000334136 TBL2Q9Y4P3 447 aaKnown RBP9.77□□□□□ -0.85
HDAC6-201ENST00000334136 TRBV24-1A0A075B6N3 115 aa9.77□□□□□ -0.85
HDAC6-201ENST00000334136 SRRM5B3KS81 715 aa9.77□□□□□ -0.85
HDAC6-201ENST00000334136 OR2J3O76001 311 aa9.77□□□□□ -0.85
HDAC6-201ENST00000334136 MT-ND6P03923 174 aa9.77□□□□□ -0.85
HDAC6-201ENST00000334136 LIPFP07098 398 aa9.77□□□□□ -0.85
HDAC6-201ENST00000334136 FOXA3P55318 350 aaPredicted RBP9.77□□□□□ -0.85
HDAC6-201ENST00000334136 LYZP61626 148 aa9.77□□□□□ -0.85
HDAC6-201ENST00000334136 ZNF664Q8N3J9 261 aa9.77□□□□□ -0.85
HDAC6-201ENST00000334136 ST6GALNAC6Q969X2 333 aa9.77□□□□□ -0.85
HDAC6-201ENST00000334136 HARBI1Q96MB7 349 aa9.77□□□□□ -0.85
HDAC6-201ENST00000334136 HS3ST6Q96QI5 342 aa9.77□□□□□ -0.85
HDAC6-201ENST00000334136 TEX50A0A1B0GTY4 177 aa9.77□□□□□ -0.85
HDAC6-201ENST00000334136 VENTXO95231 258 aa9.77□□□□□ -0.85
HDAC6-201ENST00000334136 PPOXP50336 477 aa9.77□□□□□ -0.85
HDAC6-201ENST00000334136 LCN2P80188 198 aa9.77□□□□□ -0.85
HDAC6-201ENST00000334136 TGIF2LYQ8IUE0 185 aa9.77□□□□□ -0.85
HDAC6-201ENST00000334136 OR8A1Q8NGG7 326 aa9.77□□□□□ -0.85
HDAC6-201ENST00000334136 TMEM170AQ8WVE7 144 aa9.77□□□□□ -0.85
HDAC6-201ENST00000334136 WIPF3A6NGB9 483 aa9.76□□□□□ -0.85
HDAC6-201ENST00000334136 H3BTX0 84 aa9.76□□□□□ -0.85
HDAC6-201ENST00000334136 MPDU1O75352 247 aa9.76□□□□□ -0.85
HDAC6-201ENST00000334136 DNM1P46Q6ZS02 220 aa9.76□□□□□ -0.85
HDAC6-201ENST00000334136 TMEM256Q8N2U0 113 aa9.76□□□□□ -0.85
HDAC6-201ENST00000334136 OR5R1Q8NH85 324 aa9.76□□□□□ -0.85
HDAC6-201ENST00000334136 MAP1LC3CQ9BXW4 147 aa9.76□□□□□ -0.85
HDAC6-201ENST00000334136 GOSR1O95249 250 aa9.76□□□□□ -0.85
HDAC6-201ENST00000334136 CENPWQ5EE01 88 aa9.76□□□□□ -0.85
HDAC6-201ENST00000334136 CDPF1Q6NVV7 123 aa9.76□□□□□ -0.85
HDAC6-201ENST00000334136 RPP25LQ8N5L8 163 aaKnown RBP9.76□□□□□ -0.85
HDAC6-201ENST00000334136 LRTM2Q8N967 370 aa9.76□□□□□ -0.85
HDAC6-201ENST00000334136 TMEM140Q9NV12 185 aa9.76□□□□□ -0.85
HDAC6-201ENST00000334136 CALYQ9NYX4 217 aa9.76□□□□□ -0.85
HDAC6-201ENST00000334136 IFITM10A6NMD0 228 aa9.76□□□□□ -0.85
HDAC6-201ENST00000334136 SHISA9B4DS77 424 aa9.76□□□□□ -0.85
HDAC6-201ENST00000334136 DSCR9P59020 149 aa9.76□□□□□ -0.85
HDAC6-201ENST00000334136 VMA21Q3ZAQ7 101 aa9.76□□□□□ -0.85
HDAC6-201ENST00000334136 GCSAMQ8N6F7 178 aa9.76□□□□□ -0.85
HDAC6-201ENST00000334136 BBC3Q96PG8 261 aaPredicted RBP9.76□□□□□ -0.85
HDAC6-201ENST00000334136 IGLV3-9A0A075B6K5 115 aa9.75□□□□□ -0.85
HDAC6-201ENST00000334136 TMEM178BH3BS89 294 aa9.75□□□□□ -0.85
HDAC6-201ENST00000334136 TGFAP01135 160 aa9.75□□□□□ -0.85
HDAC6-201ENST00000334136 HLA-DQA1P01909 254 aa9.75□□□□□ -0.85
HDAC6-201ENST00000334136 HIST1H1EP10412 219 aaKnown RBP9.75□□□□□ -0.85
HDAC6-201ENST00000334136 DCTN5Q9BTE1 182 aa9.75□□□□□ -0.85
HDAC6-201ENST00000334136 OR51B2Q9Y5P1 312 aa9.75□□□□□ -0.85
HDAC6-201ENST00000334136 C12orf77C9JDV5 145 aa9.75□□□□□ -0.85
HDAC6-201ENST00000334136 LINC00869P0C866 280 aa9.75□□□□□ -0.85
HDAC6-201ENST00000334136 COL8A2P25067 703 aa9.75□□□□□ -0.85
HDAC6-201ENST00000334136 GCHFRP30047 84 aa9.75□□□□□ -0.85
HDAC6-201ENST00000334136 S100A7P31151 101 aa9.75□□□□□ -0.85
HDAC6-201ENST00000334136 EFNB3Q15768 340 aa9.75□□□□□ -0.85
HDAC6-201ENST00000334136 C10orf113Q5VZT2 155 aa9.75□□□□□ -0.85
HDAC6-201ENST00000334136 LEMD1Q68G75 181 aa9.75□□□□□ -0.85
HDAC6-201ENST00000334136 GNB4Q9HAV0 340 aa9.75□□□□□ -0.85
HDAC6-201ENST00000334136 TCF19Q9Y242 345 aa9.75□□□□□ -0.85
HDAC6-201ENST00000334136 YTHDF2Q9Y5A9 579 aaKnown RBP9.75□□□□□ -0.85
HDAC6-201ENST00000334136 ISLRO14498 428 aa9.75□□□□□ -0.85
HDAC6-201ENST00000334136 RAMP3O60896 148 aa9.75□□□□□ -0.85
HDAC6-201ENST00000334136 CLEC3BP05452 202 aa9.75□□□□□ -0.85
HDAC6-201ENST00000334136 SPSB3Q6PJ21 355 aa9.75□□□□□ -0.85
HDAC6-201ENST00000334136 Q6ZR03 302 aa9.75□□□□□ -0.85
HDAC6-201ENST00000334136 CEACAM18A8MTB9 384 aa9.74□□□□□ -0.85
HDAC6-201ENST00000334136 J3QR89 54 aa9.74□□□□□ -0.85
HDAC6-201ENST00000334136 GZMBP10144 247 aa9.74□□□□□ -0.85
HDAC6-201ENST00000334136 LYL1P12980 280 aa9.74□□□□□ -0.85
HDAC6-201ENST00000334136 RPL11P62913 178 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms