RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 ERVK-16P61578 105 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 MRPS10P82664 201 aaKnown RBP4.82□□□□□ -1.64
SMG1-201ENST00000330588 FLI1Q01543 452 aaPredicted RBP4.82□□□□□ -1.64
SMG1-201ENST00000330588 ZNF45Q02386 682 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 EXOSC2Q13868 293 aaKnown RBP4.82□□□□□ -1.64
SMG1-201ENST00000330588 GAMTQ14353 236 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 CTF1Q16619 201 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 RPEL1Q2QD12 228 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 OR4A47Q6IF82 309 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 LCN12Q6JVE5 192 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 ZNF575Q86XF7 245 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 GPHB5Q86YW7 130 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 BPIFCQ8NFQ6 507 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 OR1L6Q8NGR2 347 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 OR6F1Q8NGZ6 308 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 ZNF486Q96H40 463 aaPredicted RBP4.82□□□□□ -1.64
SMG1-201ENST00000330588 CXorf58Q96LI9 332 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 AKIP1Q9NQ31 210 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 FKBP11Q9NYL4 201 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 TAS2R8Q9NYW2 309 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 A8MWP6 167 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 ZNF701M0R085 212 aaPredicted RBP4.82□□□□□ -1.64
SMG1-201ENST00000330588 BMPR1BO00238 502 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 GGCTO75223 188 aaKnown RBP4.82□□□□□ -1.64
SMG1-201ENST00000330588 PGLYRP1O75594 196 aaPredicted RBP4.82□□□□□ -1.64
SMG1-201ENST00000330588 IFNA6P05013 189 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 CSN3P07498 182 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 RPA2P15927 270 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 SPNP16150 400 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 TGFBR1P36897 503 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 OR2B8PP59922 312 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 RND3P61587 244 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 NCS1P62166 190 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 C15orf32Q32M92 178 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 AADACL3Q5VUY0 350 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 GPR107Q5VW38 600 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 IL34Q6ZMJ4 242 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 TMEM17Q86X19 198 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 ARRDC1Q8N5I2 433 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 OR5B3Q8NH48 314 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 RNASE11Q8TAA1 199 aaKnown RBP4.82□□□□□ -1.64
SMG1-201ENST00000330588 VN1R17PQ8TDU5 208 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 CASTOR1Q8WTX7 329 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 DGCR14Q96DF8 476 aaKnown RBP4.82□□□□□ -1.64
SMG1-201ENST00000330588 PRR25Q96S07 402 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 ZNF2Q9BSG1 426 aaPredicted RBP4.82□□□□□ -1.64
SMG1-201ENST00000330588 THAP7Q9BT49 309 aaPredicted RBP4.82□□□□□ -1.64
SMG1-201ENST00000330588 TPPP3Q9BW30 176 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 QTRT1Q9BXR0 403 aaKnown RBP4.82□□□□□ -1.64
SMG1-201ENST00000330588 FXYD6Q9H0Q3 95 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 TECRQ9NZ01 308 aaKnown RBP4.82□□□□□ -1.64
SMG1-201ENST00000330588 THYN1Q9P016 225 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 U3KQK5 164 aa4.82□□□□□ -1.64
SMG1-201ENST00000330588 NOTCH1P46531 2555 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 IGLV11-55A0A075B6I3 123 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 A0A1B0GW64 132 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 IGLC7A0M8Q6 106 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 CGB1A6NKQ9 187 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 NUPL2O15504 423 aaKnown RBP4.81□□□□□ -1.64
SMG1-201ENST00000330588 RBMXL2O75526 392 aaKnown RBP4.81□□□□□ -1.64
SMG1-201ENST00000330588 PTHLHP12272 177 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 ELK1P19419 428 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 HRH1P35367 487 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 RFX2P48378 723 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 CDC34P49427 236 aaPredicted RBP4.81□□□□□ -1.64
SMG1-201ENST00000330588 MEOX2P50222 304 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 ELLP55199 621 aaPredicted RBP4.81□□□□□ -1.64
SMG1-201ENST00000330588 SYNJ2BPP57105 145 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 FXYD4P59646 89 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 LSM3P62310 102 aaKnown RBP4.81□□□□□ -1.64
SMG1-201ENST00000330588 IFITM2Q01629 132 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 NHLH2Q02577 135 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 PMS2P11Q13670 270 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 TRIM16LQ309B1 348 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 OR2B11Q5JQS5 317 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 C10orf55Q5SWW7 151 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 SPSB3Q6PJ21 355 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 DMBX1Q8NFW5 382 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 OR1L8Q8NGR8 309 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 RAB2BQ8WUD1 216 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 EEF1AKMT3Q96AZ1 226 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 COMMD5Q9GZQ3 224 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 MFFQ9GZY8 342 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 HRASLSQ9HDD0 168 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 TMEM14BQ9NUH8 114 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 CCDC59Q9P031 241 aaKnown RBP4.81□□□□□ -1.64
SMG1-201ENST00000330588 COMMD3Q9UBI1 195 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 MTFP1Q9UDX5 166 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 PRNDQ9UKY0 176 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 RPH3ALQ9UNE2 315 aa4.81□□□□□ -1.64
SMG1-201ENST00000330588 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 ZNF785A8K8V0 405 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 E7EUB6 86 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 INS-IGF2F8WCM5 200 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 J3QRK9 145 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 CTDSPLO15194 276 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 TNFSF12O43508 249 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 S1PR2O95136 353 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 PMP2P02689 132 aa4.8□□□□□ -1.64
SMG1-201ENST00000330588 CD74P04233 296 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms