RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 TRAV3A0A0B4J244 114 aa13.73□□□□□ -0.21
LMNB2-201ENST00000325327 KHDC3LQ587J8 217 aa13.73□□□□□ -0.21
LMNB2-201ENST00000325327 IGKV1-16P04430 117 aa13.73□□□□□ -0.21
LMNB2-201ENST00000325327 KIAA1549LQ6ZVL6 1849 aa13.72□□□□□ -0.21
LMNB2-201ENST00000325327 BUB1B-PAK6H3BSN5 160 aa13.72□□□□□ -0.21
LMNB2-201ENST00000325327 AP4M1O00189 453 aa13.72□□□□□ -0.21
LMNB2-201ENST00000325327 COMMD1Q8N668 190 aa13.72□□□□□ -0.21
LMNB2-201ENST00000325327 IGFBPL1Q8WX77 278 aa13.72□□□□□ -0.21
LMNB2-201ENST00000325327 REG4Q9BYZ8 158 aa13.72□□□□□ -0.21
LMNB2-201ENST00000325327 VAX2Q9UIW0 290 aa13.72□□□□□ -0.21
LMNB2-201ENST00000325327 NDUFS8O00217 210 aa13.72□□□□□ -0.21
LMNB2-201ENST00000325327 MMP23AO75900 390 aa13.72□□□□□ -0.21
LMNB2-201ENST00000325327 EFNB3Q15768 340 aa13.72□□□□□ -0.21
LMNB2-201ENST00000325327 C2CD4CQ8TF44 421 aa13.72□□□□□ -0.21
LMNB2-201ENST00000325327 TRAV30A0A087WSZ9 112 aa13.72□□□□□ -0.21
LMNB2-201ENST00000325327 TFF3Q07654 80 aa13.72□□□□□ -0.21
LMNB2-201ENST00000325327 HERPUD1Q15011 391 aa13.72□□□□□ -0.21
LMNB2-201ENST00000325327 TRAV20A0A0B4J274 112 aa13.71□□□□□ -0.21
LMNB2-201ENST00000325327 LOXP28300 417 aaPredicted RBP13.71□□□□□ -0.21
LMNB2-201ENST00000325327 ZNF345Q14585 488 aa13.71□□□□□ -0.21
LMNB2-201ENST00000325327 TMEM78Q5T7P6 136 aa13.71□□□□□ -0.21
LMNB2-201ENST00000325327 ZNF383Q8NA42 475 aa13.71□□□□□ -0.21
LMNB2-201ENST00000325327 HIST1H1EP10412 219 aaKnown RBP13.71□□□□□ -0.22
LMNB2-201ENST00000325327 RELQ04864 619 aaPredicted RBP13.71□□□□□ -0.22
LMNB2-201ENST00000325327 TNFRSF14Q92956 283 aa13.71□□□□□ -0.22
LMNB2-201ENST00000325327 BSXQ3C1V8 233 aa13.7□□□□□ -0.22
LMNB2-201ENST00000325327 LINC00305Q7Z4B0 112 aa13.7□□□□□ -0.22
LMNB2-201ENST00000325327 NHLRC2Q8NBF2 726 aa13.7□□□□□ -0.22
LMNB2-201ENST00000325327 TMEM37Q8WXS4 190 aa13.7□□□□□ -0.22
LMNB2-201ENST00000325327 TRAF4Q9BUZ4 470 aaPredicted RBP13.7□□□□□ -0.22
LMNB2-201ENST00000325327 HECTD1Q9ULT8 2610 aa13.7□□□□□ -0.22
LMNB2-201ENST00000325327 NDUFB4O95168 129 aa13.7□□□□□ -0.22
LMNB2-201ENST00000325327 C8orf88P0DMB2 117 aa13.7□□□□□ -0.22
LMNB2-201ENST00000325327 GATA4P43694 442 aa13.7□□□□□ -0.22
LMNB2-201ENST00000325327 ZNF660Q6AZW8 331 aaPredicted RBP13.7□□□□□ -0.22
LMNB2-201ENST00000325327 ZNF880Q6PDB4 577 aa13.7□□□□□ -0.22
LMNB2-201ENST00000325327 C5orf17Q8NAS9 161 aa13.7□□□□□ -0.22
LMNB2-201ENST00000325327 AQP10Q96PS8 301 aa13.7□□□□□ -0.22
LMNB2-201ENST00000325327 LIME1Q9H400 295 aa13.7□□□□□ -0.22
LMNB2-201ENST00000325327 SRD5A3Q9H8P0 318 aa13.7□□□□□ -0.22
LMNB2-201ENST00000325327 RPRMQ9NS64 109 aa13.7□□□□□ -0.22
LMNB2-201ENST00000325327 TCRBV4S1A1TA0A5B7 111 aa13.7□□□□□ -0.22
LMNB2-201ENST00000325327 BTF3L4Q96K17 158 aa13.7□□□□□ -0.22
LMNB2-201ENST00000325327 C15orf61A6NNL5 157 aa13.7□□□□□ -0.22
LMNB2-201ENST00000325327 M0QZK8 103 aa13.7□□□□□ -0.22
LMNB2-201ENST00000325327 ARL14EPLP0DKL9 152 aa13.7□□□□□ -0.22
LMNB2-201ENST00000325327 RPL7P18124 248 aaKnown RBP13.7□□□□□ -0.22
LMNB2-201ENST00000325327 DLX6P56179 175 aa13.7□□□□□ -0.22
LMNB2-201ENST00000325327 CX3CL1P78423 397 aa13.7□□□□□ -0.22
LMNB2-201ENST00000325327 AARDQ4LEZ3 155 aa13.7□□□□□ -0.22
LMNB2-201ENST00000325327 LEMD1Q68G75 181 aa13.7□□□□□ -0.22
LMNB2-201ENST00000325327 SLC25A48Q6ZT89 311 aaKnown RBP13.7□□□□□ -0.22
LMNB2-201ENST00000325327 C1orf147Q96MC9 270 aaPredicted RBP13.7□□□□□ -0.22
LMNB2-201ENST00000325327 C22orf34Q6ZV56 151 aa13.69□□□□□ -0.22
LMNB2-201ENST00000325327 MANBALQ9NQG1 85 aa13.69□□□□□ -0.22
LMNB2-201ENST00000325327 IGKV1-6A0A0C4DH72 117 aa13.69□□□□□ -0.22
LMNB2-201ENST00000325327 M0R1W7 72 aa13.69□□□□□ -0.22
LMNB2-201ENST00000325327 LHFPL5Q8TAF8 219 aa13.69□□□□□ -0.22
LMNB2-201ENST00000325327 MOB4Q9Y3A3 225 aa13.69□□□□□ -0.22
LMNB2-201ENST00000325327 C19orf84I3L1E1 186 aa13.69□□□□□ -0.22
LMNB2-201ENST00000325327 PQLC2Q6ZP29 291 aa13.69□□□□□ -0.22
LMNB2-201ENST00000325327 OR10J6PQ8NGY7 276 aa13.69□□□□□ -0.22
LMNB2-201ENST00000325327 NAT8BQ9UHF3 227 aa13.69□□□□□ -0.22
LMNB2-201ENST00000325327 IGHV4-30-2A0A087WSY4 118 aa13.69□□□□□ -0.22
LMNB2-201ENST00000325327 IGHV4-61A0A0C4DH41 118 aa13.69□□□□□ -0.22
LMNB2-201ENST00000325327 HIST1H1BP16401 226 aaKnown RBP13.69□□□□□ -0.22
LMNB2-201ENST00000325327 NAT1P18440 290 aa13.69□□□□□ -0.22
LMNB2-201ENST00000325327 TMPRSS5Q9H3S3 457 aa13.69□□□□□ -0.22
LMNB2-201ENST00000325327 P01737 135 aa13.68□□□□□ -0.22
LMNB2-201ENST00000325327 C3orf36Q3SXR2 165 aa13.68□□□□□ -0.22
LMNB2-201ENST00000325327 FAM24BQ8N5W8 94 aa13.68□□□□□ -0.22
LMNB2-201ENST00000325327 ISOC2Q96AB3 205 aa13.68□□□□□ -0.22
LMNB2-201ENST00000325327 MUC22E2RYF6 1773 aaPredicted RBP13.68□□□□□ -0.22
LMNB2-201ENST00000325327 C22orf46C9J442 243 aa13.68□□□□□ -0.22
LMNB2-201ENST00000325327 HIST1H1AQ02539 215 aaPredicted RBP13.68□□□□□ -0.22
LMNB2-201ENST00000325327 CYP2G1PQ6ZSU1 146 aa13.68□□□□□ -0.22
LMNB2-201ENST00000325327 OR51M1Q9H341 326 aa13.68□□□□□ -0.22
LMNB2-201ENST00000325327 TRAV41A0A0B4J266 112 aa13.67□□□□□ -0.22
LMNB2-201ENST00000325327 HSBP1L1C9JCN9 74 aa13.67□□□□□ -0.22
LMNB2-201ENST00000325327 IL6RP08887 468 aaPredicted RBP13.67□□□□□ -0.22
LMNB2-201ENST00000325327 MRPL54Q6P161 138 aaKnown RBP13.67□□□□□ -0.22
LMNB2-201ENST00000325327 ASCL4Q6XD76 172 aa13.67□□□□□ -0.22
LMNB2-201ENST00000325327 LHFPL1Q86WI0 220 aa13.67□□□□□ -0.22
LMNB2-201ENST00000325327 PRSS8Q16651 343 aa13.67□□□□□ -0.22
LMNB2-201ENST00000325327 MINOS1Q5TGZ0 78 aa13.67□□□□□ -0.22
LMNB2-201ENST00000325327 TEX45Q8NA69 505 aa13.67□□□□□ -0.22
LMNB2-201ENST00000325327 MINOS1-NBL1R4GNA1 71 aa13.67□□□□□ -0.22
LMNB2-201ENST00000325327 TRIOO75962 3097 aa13.67□□□□□ -0.22
LMNB2-201ENST00000325327 CSN3P07498 182 aa13.67□□□□□ -0.22
LMNB2-201ENST00000325327 SUPT4H1P63272 117 aaKnown RBP13.67□□□□□ -0.22
LMNB2-201ENST00000325327 CYB561D1Q8N8Q1 229 aa13.67□□□□□ -0.22
LMNB2-201ENST00000325327 XIRP2A4UGR9 3374 aa13.67□□□□□ -0.22
LMNB2-201ENST00000325327 TEX50A0A1B0GTY4 177 aa13.67□□□□□ -0.22
LMNB2-201ENST00000325327 RBFOX2O43251 390 aaKnown RBP eCLIP13.67□□□□□ -0.225e-6■■□□□ 12.1
LMNB2-201ENST00000325327 CD81P60033 236 aa13.67□□□□□ -0.22
LMNB2-201ENST00000325327 C5orf64Q2M2E5 130 aa13.67□□□□□ -0.22
LMNB2-201ENST00000325327 OR2D3Q8NGH3 330 aa13.66□□□□□ -0.22
LMNB2-201ENST00000325327 OR10G8Q8NGN5 311 aa13.66□□□□□ -0.22
LMNB2-201ENST00000325327 H0YJW9 148 aa13.66□□□□□ -0.22
LMNB2-201ENST00000325327 DLK1P80370 383 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms