RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 F11RQ9Y624 299 aaKnown RBP14.27□□□□□ -0.12
SYNE4-201ENST00000324444 E7EUB6 86 aa14.26□□□□□ -0.13
SYNE4-201ENST00000324444 RGS13O14921 159 aa14.26□□□□□ -0.13
SYNE4-201ENST00000324444 SOX15O60248 233 aa14.26□□□□□ -0.13
SYNE4-201ENST00000324444 MPDU1O75352 247 aa14.26□□□□□ -0.13
SYNE4-201ENST00000324444 DEFA4P12838 97 aa14.26□□□□□ -0.13
SYNE4-201ENST00000324444 LY6EQ16553 131 aa14.26□□□□□ -0.13
SYNE4-201ENST00000324444 RPL7L1Q6DKI1 246 aaKnown RBP14.26□□□□□ -0.13
SYNE4-201ENST00000324444 TMEM219Q86XT9 240 aa14.26□□□□□ -0.13
SYNE4-201ENST00000324444 C22orf15Q8WYQ4 148 aa14.26□□□□□ -0.13
SYNE4-201ENST00000324444 P2RX4Q99571 388 aa14.26□□□□□ -0.13
SYNE4-201ENST00000324444 THYN1Q9P016 225 aa14.26□□□□□ -0.13
SYNE4-201ENST00000324444 UBQLN2Q9UHD9 624 aa14.26□□□□□ -0.13
SYNE4-201ENST00000324444 ANK2Q01484 3957 aa14.26□□□□□ -0.13
SYNE4-201ENST00000324444 IGHV4-59P01825 116 aa14.25□□□□□ -0.13
SYNE4-201ENST00000324444 CRYGCP07315 174 aa14.25□□□□□ -0.13
SYNE4-201ENST00000324444 HIST1H1BP16401 226 aaKnown RBP14.25□□□□□ -0.13
SYNE4-201ENST00000324444 SSBP2P81877 361 aaPredicted RBP14.25□□□□□ -0.13
SYNE4-201ENST00000324444 VWC2Q2TAL6 325 aa14.25□□□□□ -0.13
SYNE4-201ENST00000324444 FBLN7Q53RD9 439 aa14.25□□□□□ -0.13
SYNE4-201ENST00000324444 PVRIGQ6DKI7 326 aa14.25□□□□□ -0.13
SYNE4-201ENST00000324444 TTC9CQ8N5M4 171 aa14.25□□□□□ -0.13
SYNE4-201ENST00000324444 ZNF680Q8NEM1 530 aa14.25□□□□□ -0.13
SYNE4-201ENST00000324444 LRRC20Q8TCA0 184 aa14.25□□□□□ -0.13
SYNE4-201ENST00000324444 JMJD8Q96S16 334 aa14.25□□□□□ -0.13
SYNE4-201ENST00000324444 GINS3Q9BRX5 216 aa14.25□□□□□ -0.13
SYNE4-201ENST00000324444 ARV1Q9H2C2 271 aa14.25□□□□□ -0.13
SYNE4-201ENST00000324444 NPVFQ9HCQ7 196 aa14.25□□□□□ -0.13
SYNE4-201ENST00000324444 MDFIC2A0A1B0GVS7 189 aa14.24□□□□□ -0.13
SYNE4-201ENST00000324444 A0A1B0GW64 132 aa14.24□□□□□ -0.13
SYNE4-201ENST00000324444 SEC11BP0C7V7 166 aa14.24□□□□□ -0.13
SYNE4-201ENST00000324444 CTRB1P17538 263 aa14.24□□□□□ -0.13
SYNE4-201ENST00000324444 ARL16Q0P5N6 197 aa14.24□□□□□ -0.13
SYNE4-201ENST00000324444 RAB31Q13636 194 aa14.24□□□□□ -0.13
SYNE4-201ENST00000324444 AKIRIN2Q53H80 203 aa14.24□□□□□ -0.13
SYNE4-201ENST00000324444 CTRB2Q6GPI1 263 aa14.24□□□□□ -0.13
SYNE4-201ENST00000324444 HAPLN4Q86UW8 402 aa14.24□□□□□ -0.13
SYNE4-201ENST00000324444 SCARB1Q8WTV0 552 aa14.24□□□□□ -0.13
SYNE4-201ENST00000324444 ZNF48Q96MX3 618 aaPredicted RBP14.24□□□□□ -0.13
SYNE4-201ENST00000324444 PARP11Q9NR21 331 aa14.24□□□□□ -0.13
SYNE4-201ENST00000324444 ZNF580Q9UK33 172 aa14.24□□□□□ -0.13
SYNE4-201ENST00000324444 C17orf112F2Z3M2 114 aa14.23□□□□□ -0.13
SYNE4-201ENST00000324444 AREGP15514 252 aa14.23□□□□□ -0.13
SYNE4-201ENST00000324444 CRIP2P52943 208 aaPredicted RBP14.23□□□□□ -0.13
SYNE4-201ENST00000324444 RAB14P61106 215 aa14.23□□□□□ -0.13
SYNE4-201ENST00000324444 IFITM2Q01629 132 aa14.23□□□□□ -0.13
SYNE4-201ENST00000324444 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.23□□□□□ -0.13
SYNE4-201ENST00000324444 ZNF709Q8N972 641 aa14.23□□□□□ -0.13
SYNE4-201ENST00000324444 BSCL2Q96G97 398 aaPredicted RBP14.23□□□□□ -0.13
SYNE4-201ENST00000324444 SLC35E1Q96K37 410 aa14.23□□□□□ -0.13
SYNE4-201ENST00000324444 WFDC1Q9HC57 220 aa14.23□□□□□ -0.13
SYNE4-201ENST00000324444 KCNIP2Q9NS61 270 aa14.23□□□□□ -0.13
SYNE4-201ENST00000324444 PRSS46E5RG02 174 aa14.22□□□□□ -0.13
SYNE4-201ENST00000324444 IGHG2P01859 326 aa14.22□□□□□ -0.13
SYNE4-201ENST00000324444 HILS1P60008 231 aa14.22□□□□□ -0.13
SYNE4-201ENST00000324444 CD69Q07108 199 aa14.22□□□□□ -0.13
SYNE4-201ENST00000324444 SLC35E3Q7Z769 313 aa14.22□□□□□ -0.13
SYNE4-201ENST00000324444 TMEM170AQ8WVE7 144 aa14.22□□□□□ -0.13
SYNE4-201ENST00000324444 NPFFR1Q9GZQ6 430 aa14.22□□□□□ -0.13
SYNE4-201ENST00000324444 WDR61Q9GZS3 305 aaKnown RBP14.22□□□□□ -0.13
SYNE4-201ENST00000324444 WNT10AQ9GZT5 417 aa14.22□□□□□ -0.13
SYNE4-201ENST00000324444 TIMM9Q9Y5J7 89 aa14.22□□□□□ -0.13
SYNE4-201ENST00000324444 HOXA3O43365 443 aaPredicted RBP14.22□□□□□ -0.13
SYNE4-201ENST00000324444 FBXO24O75426 580 aa14.22□□□□□ -0.13
SYNE4-201ENST00000324444 IGF1P05019 195 aa14.22□□□□□ -0.13
SYNE4-201ENST00000324444 OPRK1P41145 380 aa14.22□□□□□ -0.13
SYNE4-201ENST00000324444 RAB5CP51148 216 aa14.22□□□□□ -0.13
SYNE4-201ENST00000324444 UNQ5815/PRO19632Q6UWF5 114 aa14.22□□□□□ -0.13
SYNE4-201ENST00000324444 SIGLECL1Q8N7X8 197 aa14.22□□□□□ -0.13
SYNE4-201ENST00000324444 FAM110DQ8TAY7 271 aaPredicted RBP14.22□□□□□ -0.13
SYNE4-201ENST00000324444 PSMG3Q9BT73 122 aaPredicted RBP14.22□□□□□ -0.13
SYNE4-201ENST00000324444 PRSS22Q9GZN4 317 aa14.22□□□□□ -0.13
SYNE4-201ENST00000324444 SMCO3A2RU48 225 aa14.21□□□□□ -0.14
SYNE4-201ENST00000324444 UMAD1C9J7I0 102 aa14.21□□□□□ -0.14
SYNE4-201ENST00000324444 TRIM77I1YAP6 450 aa14.21□□□□□ -0.14
SYNE4-201ENST00000324444 AP4M1O00189 453 aa14.21□□□□□ -0.14
SYNE4-201ENST00000324444 ATP6V0E1O15342 81 aa14.21□□□□□ -0.14
SYNE4-201ENST00000324444 AMY1AP04745 511 aa14.21□□□□□ -0.14
SYNE4-201ENST00000324444 REG1AP05451 166 aa14.21□□□□□ -0.14
SYNE4-201ENST00000324444 SPP1P10451 314 aa14.21□□□□□ -0.14
SYNE4-201ENST00000324444 SERF2P84101 59 aa14.21□□□□□ -0.14
SYNE4-201ENST00000324444 AKR1C1Q04828 323 aa14.21□□□□□ -0.14
SYNE4-201ENST00000324444 C9orf152Q5JTZ5 239 aa14.21□□□□□ -0.14
SYNE4-201ENST00000324444 TEPPQ6URK8 271 aa14.21□□□□□ -0.14
SYNE4-201ENST00000324444 LFNGQ8NES3 379 aa14.21□□□□□ -0.14
SYNE4-201ENST00000324444 TAF15Q92804 592 aaKnown RBP eCLIP14.21□□□□□ -0.14
SYNE4-201ENST00000324444 MISP3Q96FF7 219 aa14.21□□□□□ -0.14
SYNE4-201ENST00000324444 HSPB9Q9BQS6 159 aa14.21□□□□□ -0.14
SYNE4-201ENST00000324444 FAM103A1Q9BTL3 118 aaKnown RBP14.21□□□□□ -0.14
SYNE4-201ENST00000324444 WDR83OSQ9Y284 106 aa14.21□□□□□ -0.14
SYNE4-201ENST00000324444 FBXO7Q9Y3I1 522 aa14.21□□□□□ -0.14
SYNE4-201ENST00000324444 UBE2L5PA0A1B0GUS4 154 aa14.2□□□□□ -0.14
SYNE4-201ENST00000324444 HAX1O00165 279 aa14.2□□□□□ -0.14
SYNE4-201ENST00000324444 SCGB2A1O75556 95 aa14.2□□□□□ -0.14
SYNE4-201ENST00000324444 EGR2P11161 476 aaPredicted RBP14.2□□□□□ -0.14
SYNE4-201ENST00000324444 RPL15P61313 204 aaKnown RBP14.2□□□□□ -0.14
SYNE4-201ENST00000324444 NDPQ00604 133 aa14.2□□□□□ -0.14
SYNE4-201ENST00000324444 SLC16A13Q7RTY0 426 aa14.2□□□□□ -0.14
SYNE4-201ENST00000324444 TMEM144Q7Z5S9 345 aa14.2□□□□□ -0.14
SYNE4-201ENST00000324444 HSD17B11Q8NBQ5 300 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms