RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 POLDIP2Q9Y2S7 368 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 HTTP42858 3142 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 ARHGAP21Q5T5U3 1957 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 PRSS29PA6NIE9 313 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 LEPROTL1O95214 131 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 APOMO95445 188 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 COX5AP20674 150 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 PCOLCEQ15113 449 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 DEFB110Q30KQ9 67 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 LINC00173Q6ZV60 143 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 TBC1D26Q86UD7 250 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 SPACA3Q8IXA5 215 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 SPEM1Q8N4L4 309 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 ZADH2Q8N4Q0 377 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 GTSF1Q8WW33 167 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 TMEM133Q9H2Q1 129 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 PROK2Q9HC23 129 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 ATP23Q9Y6H3 246 aa5.49□□□□□ -1.53
ZNF540-201ENST00000316433 TDRD6O60522 2096 aaKnown RBP5.49□□□□□ -1.53
ZNF540-201ENST00000316433 GOLGA4Q13439 2230 aaKnown RBP5.48□□□□□ -1.53
ZNF540-201ENST00000316433 PRKNO60260 465 aaPredicted RBP5.48□□□□□ -1.53
ZNF540-201ENST00000316433 CXorf1O96002 111 aa5.48□□□□□ -1.53
ZNF540-201ENST00000316433 PPYP01298 95 aa5.48□□□□□ -1.53
ZNF540-201ENST00000316433 GFERP55789 205 aa5.48□□□□□ -1.53
ZNF540-201ENST00000316433 ZXDAP98168 799 aa5.48□□□□□ -1.53
ZNF540-201ENST00000316433 FOXI1Q12951 378 aa5.48□□□□□ -1.53
ZNF540-201ENST00000316433 DIAPH2-AS1Q14236 149 aa5.48□□□□□ -1.53
ZNF540-201ENST00000316433 GATSQ8NAP1 163 aa5.48□□□□□ -1.53
ZNF540-201ENST00000316433 C1orf162Q8NEQ5 155 aaPredicted RBP5.48□□□□□ -1.53
ZNF540-201ENST00000316433 H1FXQ92522 213 aaKnown RBP5.48□□□□□ -1.53
ZNF540-201ENST00000316433 PSENENQ9NZ42 101 aa5.48□□□□□ -1.53
ZNF540-201ENST00000316433 SCO2A0A1W2PP80 73 aa5.48□□□□□ -1.53
ZNF540-201ENST00000316433 A1L4Q6 167 aa5.48□□□□□ -1.53
ZNF540-201ENST00000316433 DLX2Q07687 328 aaPredicted RBP5.48□□□□□ -1.53
ZNF540-201ENST00000316433 FHL3Q13643 280 aa5.48□□□□□ -1.53
ZNF540-201ENST00000316433 GAGE13Q4V321 117 aa5.48□□□□□ -1.53
ZNF540-201ENST00000316433 FAM162BQ5T6X4 162 aa5.48□□□□□ -1.53
ZNF540-201ENST00000316433 TEPPQ6URK8 271 aa5.48□□□□□ -1.53
ZNF540-201ENST00000316433 Q6ZPA2 131 aa5.48□□□□□ -1.53
ZNF540-201ENST00000316433 OR4X2Q8NGF9 303 aa5.48□□□□□ -1.53
ZNF540-201ENST00000316433 OR9G4Q8NGQ1 327 aa5.48□□□□□ -1.53
ZNF540-201ENST00000316433 OR1L1Q8NH94 360 aa5.48□□□□□ -1.53
ZNF540-201ENST00000316433 LRRC29Q8WV35 223 aa5.48□□□□□ -1.53
ZNF540-201ENST00000316433 RDH5Q92781 318 aa5.48□□□□□ -1.53
ZNF540-201ENST00000316433 C18orf15Q96N68 181 aa5.48□□□□□ -1.53
ZNF540-201ENST00000316433 MAP1LC3CQ9BXW4 147 aa5.48□□□□□ -1.53
ZNF540-201ENST00000316433 ONECUT1Q9UBC0 465 aa5.48□□□□□ -1.53
ZNF540-201ENST00000316433 IGKV1-27A0A075B6S5 117 aa5.47□□□□□ -1.53
ZNF540-201ENST00000316433 SH2D7A6NKC9 451 aaPredicted RBP5.47□□□□□ -1.53
ZNF540-201ENST00000316433 E9PLN8 166 aa5.47□□□□□ -1.53
ZNF540-201ENST00000316433 CFIP05156 583 aa5.47□□□□□ -1.53
ZNF540-201ENST00000316433 IAPPP10997 89 aa5.47□□□□□ -1.53
ZNF540-201ENST00000316433 G6PCP35575 357 aa5.47□□□□□ -1.53
ZNF540-201ENST00000316433 NDUFV3P56181 108 aaKnown RBP5.47□□□□□ -1.53
ZNF540-201ENST00000316433 RPL8P62917 257 aaKnown RBP5.47□□□□□ -1.53
ZNF540-201ENST00000316433 SLC38A11Q08AI6 406 aa5.47□□□□□ -1.53
ZNF540-201ENST00000316433 SSX8Q7RTT4 187 aa5.47□□□□□ -1.53
ZNF540-201ENST00000316433 DTX1Q86Y01 620 aa5.47□□□□□ -1.53
ZNF540-201ENST00000316433 Q8IYB0 196 aa5.47□□□□□ -1.53
ZNF540-201ENST00000316433 PPP1R35Q8TAP8 253 aa5.47□□□□□ -1.53
ZNF540-201ENST00000316433 MPC1Q9Y5U8 109 aa5.47□□□□□ -1.53
ZNF540-201ENST00000316433 BRCA2P51587 3418 aa5.47□□□□□ -1.53
ZNF540-201ENST00000316433 IGHV1-45A0A0A0MS14 117 aa5.47□□□□□ -1.53
ZNF540-201ENST00000316433 ARL4DP49703 201 aa5.47□□□□□ -1.53
ZNF540-201ENST00000316433 MALLQ13021 153 aa5.47□□□□□ -1.53
ZNF540-201ENST00000316433 MFAP5Q13361 173 aa5.47□□□□□ -1.53
ZNF540-201ENST00000316433 TMEM14EPQ6UXP3 125 aa5.47□□□□□ -1.53
ZNF540-201ENST00000316433 C1QL2Q7Z5L3 287 aa5.47□□□□□ -1.53
ZNF540-201ENST00000316433 ATP6V0E2Q8NHE4 81 aa5.47□□□□□ -1.53
ZNF540-201ENST00000316433 ZNF331Q9NQX6 463 aaPredicted RBP5.47□□□□□ -1.53
ZNF540-201ENST00000316433 FREM3P0C091 2139 aa5.47□□□□□ -1.53
ZNF540-201ENST00000316433 IGHV1-24A0A0C4DH33 117 aa5.46□□□□□ -1.53
ZNF540-201ENST00000316433 LY6G6EA0A0G2JKS1 128 aa5.46□□□□□ -1.53
ZNF540-201ENST00000316433 C9JCJ5 164 aa5.46□□□□□ -1.53
ZNF540-201ENST00000316433 H3BMG7 143 aa5.46□□□□□ -1.53
ZNF540-201ENST00000316433 OR7C1O76099 320 aaPredicted RBP5.46□□□□□ -1.53
ZNF540-201ENST00000316433 CT45A6P0DMU7 189 aa5.46□□□□□ -1.53
ZNF540-201ENST00000316433 CT45A5P0DMU8 189 aa5.46□□□□□ -1.53
ZNF540-201ENST00000316433 CT45A7P0DMV0 189 aa5.46□□□□□ -1.53
ZNF540-201ENST00000316433 RPS18P62269 152 aaKnown RBP5.46□□□□□ -1.53
ZNF540-201ENST00000316433 CT45A1Q5HYN5 189 aa5.46□□□□□ -1.53
ZNF540-201ENST00000316433 ZNF645Q8N7E2 425 aa5.46□□□□□ -1.53
ZNF540-201ENST00000316433 TEX45Q8NA69 505 aa5.46□□□□□ -1.53
ZNF540-201ENST00000316433 CT45A3Q8NHU0 189 aa5.46□□□□□ -1.53
ZNF540-201ENST00000316433 URB1-AS1Q96HZ7 61 aa5.46□□□□□ -1.53
ZNF540-201ENST00000316433 PRELID3AQ96N28 172 aa5.46□□□□□ -1.53
ZNF540-201ENST00000316433 RPP25Q9BUL9 199 aaKnown RBP5.46□□□□□ -1.53
ZNF540-201ENST00000316433 PRO0461Q9UI25 63 aa5.46□□□□□ -1.53
ZNF540-201ENST00000316433 PIGLQ9Y2B2 252 aa5.46□□□□□ -1.53
ZNF540-201ENST00000316433 U3KQA8 63 aa5.46□□□□□ -1.53
ZNF540-201ENST00000316433 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.46□□□□□ -1.54
ZNF540-201ENST00000316433 A0A1B0GWB2 263 aa5.46□□□□□ -1.54
ZNF540-201ENST00000316433 SYNGR2O43760 224 aa5.46□□□□□ -1.54
ZNF540-201ENST00000316433 ZIC3O60481 467 aa5.46□□□□□ -1.54
ZNF540-201ENST00000316433 FCGR2AP12318 317 aa5.46□□□□□ -1.54
ZNF540-201ENST00000316433 SRD5A1P18405 259 aa5.46□□□□□ -1.54
ZNF540-201ENST00000316433 LTBRP36941 435 aa5.46□□□□□ -1.54
ZNF540-201ENST00000316433 MFAP4P55083 255 aa5.46□□□□□ -1.54
ZNF540-201ENST00000316433 TAS2R45P59539 299 aa5.46□□□□□ -1.54
ZNF540-201ENST00000316433 GUSBP1Q15486 140 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms