RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 CHD5Q8TDI0 1954 aa5.76□□□□□ -1.49
GAPVD1-202ENST00000297933 E9PQ18 207 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 PEX7O00628 323 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 WFDC12Q8WWY7 111 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 SIPA1L1O43166 1804 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 LOC107984156A0A0G2JMH3 177 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 CGAP01215 116 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 CD5P06127 495 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 GATA3P23771 443 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 TFF3Q07654 80 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 JOSD1Q15040 202 aaPredicted RBP5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 ARL17AQ8IVW1 177 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 FGFBP3Q8TAT2 258 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 RBM38Q9H0Z9 239 aaKnown RBP5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 NPDC1Q9NQX5 325 aaPredicted RBP5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 TBL2Q9Y4P3 447 aaKnown RBP5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 GRIFINA4D1Z8 144 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 FBLL1A6NHQ2 334 aaKnown RBP5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 C15orf61A6NNL5 157 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 LINC00271P0C7V0 271 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 CRYGSP22914 178 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 MAPK1IP1LQ8NDC0 245 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 LYZL4Q96KX0 146 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 OTORQ9NRC9 128 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 SCN2AQ99250 2005 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 CCDC88CQ9P219 2028 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 TRAV21A0A0B4J279 112 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 MSMBP08118 114 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 MDKP21741 143 aaPredicted RBP5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 COL8A2P25067 703 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 HBBP68871 147 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 CD200R1LQ6Q8B3 271 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 PRELID3AQ96N28 172 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 SOX21Q9Y651 276 aaPredicted RBP5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 SELENOKQ9Y6D0 94 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 MAP1BP46821 2468 aaKnown RBP5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 GREB1LQ9C091 1923 aaPredicted RBP5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 TMEM250H0YL14 139 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 OVOL1O14753 267 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 MLNRO43193 412 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 DNAL4O96015 105 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 F12P00748 615 aaPredicted RBP5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 IGHG3P01860 377 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 CNTFRP26992 372 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 CBLN2Q8IUK8 224 aa5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 PSMG3Q9BT73 122 aaPredicted RBP5.75□□□□□ -1.49
GAPVD1-202ENST00000297933 TRBV6-7A0A0A0MS04 114 aa5.74□□□□□ -1.49
GAPVD1-202ENST00000297933 MUC21A0A0G2JKD1 596 aa5.74□□□□□ -1.49
GAPVD1-202ENST00000297933 MUC21A0A140T8X8 626 aa5.74□□□□□ -1.49
GAPVD1-202ENST00000297933 OR10J3Q5JRS4 329 aa5.74□□□□□ -1.49
GAPVD1-202ENST00000297933 ERASQ7Z444 233 aa5.74□□□□□ -1.49
GAPVD1-202ENST00000297933 FER1L6-AS1Q8NA97 138 aa5.74□□□□□ -1.49
GAPVD1-202ENST00000297933 ASCL2Q99929 193 aa5.74□□□□□ -1.49
GAPVD1-202ENST00000297933 CABIN1Q9Y6J0 2220 aa5.74□□□□□ -1.49
GAPVD1-202ENST00000297933 IGHV1-3A0A0C4DH29 117 aa5.74□□□□□ -1.49
GAPVD1-202ENST00000297933 A0A1B0GTI1 187 aa5.74□□□□□ -1.49
GAPVD1-202ENST00000297933 LRTM2Q8N967 370 aa5.74□□□□□ -1.49
GAPVD1-202ENST00000297933 GTF3AQ92664 365 aaKnown RBP5.74□□□□□ -1.49
GAPVD1-202ENST00000297933 SFRP2Q96HF1 295 aa5.74□□□□□ -1.49
GAPVD1-202ENST00000297933 RARRES2Q99969 163 aa5.74□□□□□ -1.49
GAPVD1-202ENST00000297933 CXCL2P19875 107 aa5.74□□□□□ -1.49
GAPVD1-202ENST00000297933 GATA2P23769 480 aaPredicted RBP5.74□□□□□ -1.49
GAPVD1-202ENST00000297933 FOXG1P55316 489 aaPredicted RBP5.74□□□□□ -1.49
GAPVD1-202ENST00000297933 NEUROG1Q92886 237 aa5.74□□□□□ -1.49
GAPVD1-202ENST00000297933 SCGB3A1Q96QR1 104 aa5.74□□□□□ -1.49
GAPVD1-202ENST00000297933 PAM16Q9Y3D7 125 aa5.74□□□□□ -1.49
GAPVD1-202ENST00000297933 OR11H12B2RN74 326 aa5.74□□□□□ -1.49
GAPVD1-202ENST00000297933 AGAP20933 346 aa5.74□□□□□ -1.49
GAPVD1-202ENST00000297933 C2orf68Q2NKX9 166 aa5.74□□□□□ -1.49
GAPVD1-202ENST00000297933 CIARTQ8N365 385 aaPredicted RBP5.74□□□□□ -1.49
GAPVD1-202ENST00000297933 CHCHD5Q9BSY4 110 aa5.74□□□□□ -1.49
GAPVD1-202ENST00000297933 NINQ8N4C6 2090 aa5.74□□□□□ -1.49
GAPVD1-202ENST00000297933 ZNF815PA8K554 130 aa5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 UCP1P25874 307 aa5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 SRIP30626 198 aa5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 C15orf32Q32M92 178 aa5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 FBLN7Q53RD9 439 aa5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 MIR17HGQ75NE6 70 aa5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 RPUSD1Q9UJJ7 312 aaKnown RBP5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 RBMY1BA6NDE4 496 aaKnown RBP5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 RBMY1EA6NEQ0 496 aaKnown RBP5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 FABP5P3A8MUU1 101 aa5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 SRRM5B3KS81 715 aa5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 RBMY1DP0C7P1 496 aaKnown RBP5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 RBMY1A1P0DJD3 496 aaKnown RBP5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 RBMY1CP0DJD4 496 aa5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 NUDT10Q8NFP7 164 aa5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 FAM110DQ8TAY7 271 aaPredicted RBP5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 HSPB9Q9BQS6 159 aa5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 PARLQ9H300 379 aa5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 TMEM160Q9NX00 188 aa5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 DICER1Q9UPY3 1922 aaKnown RBP5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 ZNF25P17030 456 aaPredicted RBP5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 ST20Q9HBF5 79 aa5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 TRBV7-1A0A0A6YYK4 115 aa5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 IGKV3D-20A0A0C4DH25 116 aa5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 E7EQL1 145 aa5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 LY6HO94772 140 aa5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 C1QTNF4Q9BXJ3 329 aa5.73□□□□□ -1.49
GAPVD1-202ENST00000297933 MBNL3Q9NUK0 354 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms