RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 LINC00614P0C842 121 aa12.9□□□□□ -0.34
FNDC1-201ENST00000297267 RPL23P62829 140 aaKnown RBP12.9□□□□□ -0.34
FNDC1-201ENST00000297267 TUBA4BQ9H853 241 aa12.9□□□□□ -0.34
FNDC1-201ENST00000297267 K7ERU9 68 aa12.9□□□□□ -0.34
FNDC1-201ENST00000297267 THADAQ6YHU6 1953 aa12.9□□□□□ -0.34
FNDC1-201ENST00000297267 ZNF729A6NN14 1252 aaPredicted RBP12.9□□□□□ -0.35
FNDC1-201ENST00000297267 CXCL1P09341 107 aa12.9□□□□□ -0.35
FNDC1-201ENST00000297267 C1orf122Q6ZSJ8 110 aa12.9□□□□□ -0.35
FNDC1-201ENST00000297267 WDR90Q96KV7 1748 aa12.9□□□□□ -0.35
FNDC1-201ENST00000297267 CD8AP01732 235 aa12.89□□□□□ -0.35
FNDC1-201ENST00000297267 TTC32Q5I0X7 151 aa12.89□□□□□ -0.35
FNDC1-201ENST00000297267 C10orf128Q5T292 105 aa12.89□□□□□ -0.35
FNDC1-201ENST00000297267 GP6Q9HCN6 339 aa12.89□□□□□ -0.35
FNDC1-201ENST00000297267 NCR2O95944 276 aa12.89□□□□□ -0.35
FNDC1-201ENST00000297267 ZNF525Q8N782 197 aa12.89□□□□□ -0.35
FNDC1-201ENST00000297267 LY6G6FQ5SQ64 297 aa12.89□□□□□ -0.35
FNDC1-201ENST00000297267 NPIPB9F8W1W9 429 aa12.89□□□□□ -0.35
FNDC1-201ENST00000297267 NPIPB7O75200 414 aa12.89□□□□□ -0.35
FNDC1-201ENST00000297267 CD7P09564 240 aa12.89□□□□□ -0.35
FNDC1-201ENST00000297267 IGLV3-21P80748 117 aaPredicted RBP12.89□□□□□ -0.35
FNDC1-201ENST00000297267 CFHR1Q03591 330 aa12.89□□□□□ -0.35
FNDC1-201ENST00000297267 MAPK1IP1LQ8NDC0 245 aa12.89□□□□□ -0.35
FNDC1-201ENST00000297267 C7orf69Q9H7B7 122 aa12.89□□□□□ -0.35
FNDC1-201ENST00000297267 IGKV1-27A0A075B6S5 117 aa12.88□□□□□ -0.35
FNDC1-201ENST00000297267 LBHQ53QV2 105 aaPredicted RBP12.88□□□□□ -0.35
FNDC1-201ENST00000297267 EXOC3-AS1Q8N2X6 119 aa12.88□□□□□ -0.35
FNDC1-201ENST00000297267 ZSWIM8A7E2V4 1837 aa12.88□□□□□ -0.35
FNDC1-201ENST00000297267 NPIPB6E9PJ23 425 aa12.88□□□□□ -0.35
FNDC1-201ENST00000297267 IGHV1-18A0A0C4DH31 117 aa12.88□□□□□ -0.35
FNDC1-201ENST00000297267 PQLC2LA1A4F0 135 aa12.88□□□□□ -0.35
FNDC1-201ENST00000297267 TMEM186Q96B77 213 aa12.88□□□□□ -0.35
FNDC1-201ENST00000297267 PLXND1Q9Y4D7 1925 aa12.88□□□□□ -0.35
FNDC1-201ENST00000297267 FOXL1Q12952 345 aa12.88□□□□□ -0.35
FNDC1-201ENST00000297267 FLVCR1-AS1Q8TAF5 88 aa12.88□□□□□ -0.35
FNDC1-201ENST00000297267 H3BUT2 72 aa12.87□□□□□ -0.35
FNDC1-201ENST00000297267 ZNF324BQ6AW86 544 aaPredicted RBP12.87□□□□□ -0.35
FNDC1-201ENST00000297267 IGFBPL1Q8WX77 278 aa12.87□□□□□ -0.35
FNDC1-201ENST00000297267 RPP21Q9H633 154 aaKnown RBP12.87□□□□□ -0.35
FNDC1-201ENST00000297267 PLSCR2Q9NRY7 297 aa12.87□□□□□ -0.35
FNDC1-201ENST00000297267 KBTBD11-OT1A0A1B0GTJ5 212 aa12.87□□□□□ -0.35
FNDC1-201ENST00000297267 LYPD3O95274 346 aa12.87□□□□□ -0.35
FNDC1-201ENST00000297267 IGFBP3P17936 291 aaPredicted RBP12.87□□□□□ -0.35
FNDC1-201ENST00000297267 SNRPD3P62318 126 aaKnown RBP12.87□□□□□ -0.35
FNDC1-201ENST00000297267 REC114Q7Z4M0 266 aa12.87□□□□□ -0.35
FNDC1-201ENST00000297267 TM2D1Q9BX74 207 aa12.87□□□□□ -0.35
FNDC1-201ENST00000297267 KLF17Q5JT82 389 aaPredicted RBP12.87□□□□□ -0.35
FNDC1-201ENST00000297267 SAXO1Q8IYX7 474 aa12.87□□□□□ -0.35
FNDC1-201ENST00000297267 SFXN3Q9BWM7 321 aa12.87□□□□□ -0.35
FNDC1-201ENST00000297267 LTBP1Q14766 1721 aa12.87□□□□□ -0.35
FNDC1-201ENST00000297267 EFNA2O43921 213 aa12.87□□□□□ -0.35
FNDC1-201ENST00000297267 LINC00477Q96M19 166 aa12.87□□□□□ -0.35
FNDC1-201ENST00000297267 TNFRSF18Q9Y5U5 241 aa12.87□□□□□ -0.35
FNDC1-201ENST00000297267 IGHV3-53P01767 116 aa12.86□□□□□ -0.35
FNDC1-201ENST00000297267 SFTPCP11686 197 aa12.86□□□□□ -0.35
FNDC1-201ENST00000297267 C1QTNF5Q9BXJ0 243 aa12.86□□□□□ -0.35
FNDC1-201ENST00000297267 DMRT1Q9Y5R6 373 aa12.86□□□□□ -0.35
FNDC1-201ENST00000297267 LINC00114Q6XXX2 140 aa12.86□□□□□ -0.35
FNDC1-201ENST00000297267 IGKV1-12A0A0C4DH73 117 aa12.86□□□□□ -0.35
FNDC1-201ENST00000297267 IGKV1D-12P01611 117 aa12.86□□□□□ -0.35
FNDC1-201ENST00000297267 WBP1Q96G27 269 aa12.86□□□□□ -0.35
FNDC1-201ENST00000297267 TMEM238LA0A1B0GVL6 79 aa12.86□□□□□ -0.35
FNDC1-201ENST00000297267 A6NJY4 79 aa12.86□□□□□ -0.35
FNDC1-201ENST00000297267 LOC390937A0A1W2PQ73 354 aa12.86□□□□□ -0.35
FNDC1-201ENST00000297267 MLANAQ16655 118 aa12.86□□□□□ -0.35
FNDC1-201ENST00000297267 SCN10AQ9Y5Y9 1956 aa12.85□□□□□ -0.35
FNDC1-201ENST00000297267 ASIPP42127 132 aa12.85□□□□□ -0.35
FNDC1-201ENST00000297267 ZNF585BQ52M93 769 aa12.85□□□□□ -0.35
FNDC1-201ENST00000297267 NEUROG1Q92886 237 aa12.85□□□□□ -0.35
FNDC1-201ENST00000297267 SDF2L1Q9HCN8 221 aa12.85□□□□□ -0.35
FNDC1-201ENST00000297267 SELENOTP62341 195 aa12.85□□□□□ -0.35
FNDC1-201ENST00000297267 KIR2DL4Q99706 377 aa12.85□□□□□ -0.35
FNDC1-201ENST00000297267 YAE1D1Q9NRH1 226 aa12.85□□□□□ -0.35
FNDC1-201ENST00000297267 ZNF138P52744 262 aa12.85□□□□□ -0.35
FNDC1-201ENST00000297267 COX19Q49B96 90 aa12.85□□□□□ -0.35
FNDC1-201ENST00000297267 MORN2Q502X0 79 aa12.85□□□□□ -0.35
FNDC1-201ENST00000297267 BRD3OSQ6XYD6 125 aa12.85□□□□□ -0.35
FNDC1-201ENST00000297267 OCC1Q8TAD7 63 aa12.85□□□□□ -0.35
FNDC1-201ENST00000297267 FAM168AQ92567 244 aa12.85□□□□□ -0.35
FNDC1-201ENST00000297267 TRAV2A0A0B4J234 112 aa12.85□□□□□ -0.35
FNDC1-201ENST00000297267 NPIPB4C9JG80 1138 aa12.85□□□□□ -0.35
FNDC1-201ENST00000297267 CFHR5Q9BXR6 569 aa12.85□□□□□ -0.35
FNDC1-201ENST00000297267 PHF3Q92576 2039 aaKnown RBP12.84□□□□□ -0.35
FNDC1-201ENST00000297267 NPIPB13A6NJU9 1138 aa12.84□□□□□ -0.35
FNDC1-201ENST00000297267 NPIPB5A8MRT5 1133 aa12.84□□□□□ -0.35
FNDC1-201ENST00000297267 SMKR1H3BMG3 65 aa12.84□□□□□ -0.35
FNDC1-201ENST00000297267 BEND2Q8NDZ0 799 aa12.84□□□□□ -0.35
FNDC1-201ENST00000297267 HELZP42694 1942 aaKnown RBP12.84□□□□□ -0.35
FNDC1-201ENST00000297267 EFEMP2O95967 443 aa12.84□□□□□ -0.35
FNDC1-201ENST00000297267 NAPSAO96009 420 aa12.84□□□□□ -0.35
FNDC1-201ENST00000297267 PGPEP1Q9NXJ5 209 aa12.84□□□□□ -0.35
FNDC1-201ENST00000297267 SEMA5BQ9P283 1151 aa12.84□□□□□ -0.35
FNDC1-201ENST00000297267 ZNF474Q6S9Z5 364 aaPredicted RBP12.84□□□□□ -0.35
FNDC1-201ENST00000297267 FER1L6-AS1Q8NA97 138 aa12.84□□□□□ -0.35
FNDC1-201ENST00000297267 WISP1O95388 367 aa12.84□□□□□ -0.35
FNDC1-201ENST00000297267 C12orf54Q6X4T0 127 aa12.84□□□□□ -0.35
FNDC1-201ENST00000297267 CDC42EP3Q9UKI2 254 aa12.84□□□□□ -0.35
FNDC1-201ENST00000297267 A0A1B0GWB2 263 aa12.83□□□□□ -0.36
FNDC1-201ENST00000297267 B9A039 149 aa12.83□□□□□ -0.36
FNDC1-201ENST00000297267 TDGF1P13385 188 aa12.83□□□□□ -0.36
FNDC1-201ENST00000297267 MST1P26927 711 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 170.9 ms