RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 DSCAMO60469 2012 aa13.44□□□□□ -0.26
UBR3-201ENST00000272793 HOGA1Q86XE5 327 aa13.44□□□□□ -0.26
UBR3-201ENST00000272793 OBSL1O75147 1896 aa13.44□□□□□ -0.26
UBR3-201ENST00000272793 C8orf31Q8N9H6 132 aa13.44□□□□□ -0.26
UBR3-201ENST00000272793 TMEM8BA6NDV4 472 aa13.43□□□□□ -0.26
UBR3-201ENST00000272793 GCHFRP30047 84 aa13.43□□□□□ -0.26
UBR3-201ENST00000272793 ZFP36L2P47974 494 aaKnown RBP13.43□□□□□ -0.26
UBR3-201ENST00000272793 DMKNQ6E0U4 476 aaPredicted RBP13.43□□□□□ -0.26
UBR3-201ENST00000272793 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.43□□□□□ -0.26
UBR3-201ENST00000272793 HOXB3P14651 431 aaPredicted RBP13.43□□□□□ -0.26
UBR3-201ENST00000272793 EGR4Q05215 589 aa13.43□□□□□ -0.26
UBR3-201ENST00000272793 HAPLN4Q86UW8 402 aa13.43□□□□□ -0.26
UBR3-201ENST00000272793 VENTXO95231 258 aa13.43□□□□□ -0.26
UBR3-201ENST00000272793 OR2H2O95918 312 aa13.43□□□□□ -0.26
UBR3-201ENST00000272793 ZNF124Q15973 351 aa13.43□□□□□ -0.26
UBR3-201ENST00000272793 PSMG4Q5JS54 123 aa13.43□□□□□ -0.26
UBR3-201ENST00000272793 PIK3C2AO00443 1686 aa13.43□□□□□ -0.26
UBR3-201ENST00000272793 FAM90A7PA6NKC0 464 aa13.43□□□□□ -0.26
UBR3-201ENST00000272793 FAM90A22PA8MWA6 464 aa13.43□□□□□ -0.26
UBR3-201ENST00000272793 FAM90A12PA8MX19 464 aa13.43□□□□□ -0.26
UBR3-201ENST00000272793 FAM90A23PA8MXZ1 464 aa13.43□□□□□ -0.26
UBR3-201ENST00000272793 GPBAR1Q8TDU6 330 aa13.43□□□□□ -0.26
UBR3-201ENST00000272793 RGPD3A6NKT7 1758 aaPredicted RBP13.43□□□□□ -0.26
UBR3-201ENST00000272793 ODAMA1E959 279 aa13.43□□□□□ -0.26
UBR3-201ENST00000272793 NMBP08949 121 aa13.43□□□□□ -0.26
UBR3-201ENST00000272793 LAGE3Q14657 143 aa13.43□□□□□ -0.26
UBR3-201ENST00000272793 CT62P0C5K7 136 aa13.42□□□□□ -0.26
UBR3-201ENST00000272793 P2RY6Q15077 328 aa13.42□□□□□ -0.26
UBR3-201ENST00000272793 WFDC9Q8NEX5 89 aa13.42□□□□□ -0.26
UBR3-201ENST00000272793 UCN2Q96RP3 112 aa13.42□□□□□ -0.26
UBR3-201ENST00000272793 UBL5Q9BZL1 73 aa13.42□□□□□ -0.26
UBR3-201ENST00000272793 ABCA3Q99758 1704 aa13.42□□□□□ -0.26
UBR3-201ENST00000272793 PPP1R27Q86WC6 154 aa13.42□□□□□ -0.26
UBR3-201ENST00000272793 C1orf174Q8IYL3 243 aa13.42□□□□□ -0.26
UBR3-201ENST00000272793 PPIFP30405 207 aaKnown RBP13.42□□□□□ -0.26
UBR3-201ENST00000272793 ERCC8Q13216 396 aa13.42□□□□□ -0.26
UBR3-201ENST00000272793 DTX1Q86Y01 620 aa13.42□□□□□ -0.26
UBR3-201ENST00000272793 C14orf132Q9NPU4 83 aa13.42□□□□□ -0.26
UBR3-201ENST00000272793 CA11O75493 328 aa13.42□□□□□ -0.26
UBR3-201ENST00000272793 HMGA1P17096 107 aaKnown RBP13.42□□□□□ -0.26
UBR3-201ENST00000272793 UCP2P55851 309 aa13.42□□□□□ -0.26
UBR3-201ENST00000272793 FOXL1Q12952 345 aa13.42□□□□□ -0.26
UBR3-201ENST00000272793 RNASE7Q9H1E1 156 aaKnown RBP13.42□□□□□ -0.26
UBR3-201ENST00000272793 TMEM30AQ9NV96 361 aa13.42□□□□□ -0.26
UBR3-201ENST00000272793 TRA2AQ13595 282 aaKnown RBP eCLIP13.42□□□□□ -0.26
UBR3-201ENST00000272793 TMEM240Q5SV17 173 aa13.42□□□□□ -0.26
UBR3-201ENST00000272793 RSPO2Q6UXX9 243 aaPredicted RBP13.42□□□□□ -0.26
UBR3-201ENST00000272793 TCRBV5S1A1TA0A578 114 aa13.42□□□□□ -0.26
UBR3-201ENST00000272793 CHCHD1Q96BP2 118 aaKnown RBP13.42□□□□□ -0.26
UBR3-201ENST00000272793 Q9H3A6 140 aa13.42□□□□□ -0.26
UBR3-201ENST00000272793 GCSAMQ8N6F7 178 aa13.41□□□□□ -0.26
UBR3-201ENST00000272793 ROS1P08922 2347 aa13.41□□□□□ -0.26
UBR3-201ENST00000272793 AHRRA9YTQ3 701 aa13.41□□□□□ -0.26
UBR3-201ENST00000272793 ORMDL2Q53FV1 153 aa13.41□□□□□ -0.26
UBR3-201ENST00000272793 ZNF660Q6AZW8 331 aaPredicted RBP13.41□□□□□ -0.26
UBR3-201ENST00000272793 WDYHV1Q96HA8 205 aa13.41□□□□□ -0.26
UBR3-201ENST00000272793 ERVH48-1M5A8F1 160 aa13.41□□□□□ -0.26
UBR3-201ENST00000272793 VDAC2P45880 294 aaPredicted RBP13.41□□□□□ -0.26
UBR3-201ENST00000272793 GAS1P54826 345 aa13.41□□□□□ -0.26
UBR3-201ENST00000272793 ITLN1Q8WWA0 313 aa13.41□□□□□ -0.26
UBR3-201ENST00000272793 MRPS18BQ9Y676 258 aaKnown RBP13.41□□□□□ -0.26
UBR3-201ENST00000272793 TECTAO75443 2155 aa13.41□□□□□ -0.26
UBR3-201ENST00000272793 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.4□□□□□ -0.26
UBR3-201ENST00000272793 NBL1P41271 181 aa13.4□□□□□ -0.26
UBR3-201ENST00000272793 UCP3P55916 312 aa13.4□□□□□ -0.26
UBR3-201ENST00000272793 NKAPP1Q8N9T2 125 aa13.4□□□□□ -0.26
UBR3-201ENST00000272793 NRN1Q9NPD7 142 aa13.4□□□□□ -0.26
UBR3-201ENST00000272793 MLNRO43193 412 aa13.4□□□□□ -0.26
UBR3-201ENST00000272793 FGF12P61328 243 aa13.4□□□□□ -0.26
UBR3-201ENST00000272793 ATP5L2Q7Z4Y8 100 aa13.4□□□□□ -0.26
UBR3-201ENST00000272793 C11orf44Q8N8P7 122 aa13.4□□□□□ -0.26
UBR3-201ENST00000272793 MARS2Q96GW9 593 aaKnown RBP13.4□□□□□ -0.26
UBR3-201ENST00000272793 PRDM13Q9H4Q3 707 aa13.4□□□□□ -0.26
UBR3-201ENST00000272793 CA7P43166 264 aa13.4□□□□□ -0.26
UBR3-201ENST00000272793 PSG3Q16557 428 aa13.4□□□□□ -0.26
UBR3-201ENST00000272793 SCARF2Q96GP6 870 aaPredicted RBP13.4□□□□□ -0.26
UBR3-201ENST00000272793 GDF15Q99988 308 aa13.4□□□□□ -0.26
UBR3-201ENST00000272793 IZUMO1RA6ND01 250 aa13.4□□□□□ -0.26
UBR3-201ENST00000272793 SPANXA1Q9NS26 97 aa13.4□□□□□ -0.27
UBR3-201ENST00000272793 PARP14Q460N5 1801 aa13.39□□□□□ -0.27
UBR3-201ENST00000272793 GAGE7O76087 117 aa13.39□□□□□ -0.27
UBR3-201ENST00000272793 IGKV1D-33P01593 117 aa13.39□□□□□ -0.27
UBR3-201ENST00000272793 IGKV1-33P01594 117 aa13.39□□□□□ -0.27
UBR3-201ENST00000272793 GAGE12FP0CL80 117 aa13.39□□□□□ -0.27
UBR3-201ENST00000272793 GAGE12GP0CL81 117 aa13.39□□□□□ -0.27
UBR3-201ENST00000272793 GAGE12IP0CL82 117 aa13.39□□□□□ -0.27
UBR3-201ENST00000272793 ZNF826PQ6ZT77 177 aa13.39□□□□□ -0.27
UBR3-201ENST00000272793 TMEM222Q9H0R3 208 aa13.39□□□□□ -0.27
UBR3-201ENST00000272793 VWA8A3KMH1 1905 aa13.39□□□□□ -0.27
UBR3-201ENST00000272793 ARPC1AQ92747 370 aa13.39□□□□□ -0.27
UBR3-201ENST00000272793 DOT1LQ8TEK3 1739 aa13.39□□□□□ -0.27
UBR3-201ENST00000272793 TCRBV4S1A1TA0A5B7 111 aa13.39□□□□□ -0.27
UBR3-201ENST00000272793 LILRA5A6NI73 299 aa13.39□□□□□ -0.27
UBR3-201ENST00000272793 VSIG8P0DPA2 414 aa13.39□□□□□ -0.27
UBR3-201ENST00000272793 SELLP14151 372 aa13.39□□□□□ -0.27
UBR3-201ENST00000272793 HSD52Q0P140 79 aa13.39□□□□□ -0.27
UBR3-201ENST00000272793 TRAV12-2A0A075B6T6 113 aa13.39□□□□□ -0.27
UBR3-201ENST00000272793 HMGA2P52926 109 aa13.39□□□□□ -0.27
UBR3-201ENST00000272793 MSRB3Q8IXL7 192 aa13.38□□□□□ -0.27
UBR3-201ENST00000272793 PGLYRP1O75594 196 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms