RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 LRRC10Q5BKY1 277 aa13.14□□□□□ -0.31
MAP1LC3B-201ENST00000268607 ZNF497Q6ZNH5 498 aa13.14□□□□□ -0.31
MAP1LC3B-201ENST00000268607 LHFPL4Q7Z7J7 247 aa13.14□□□□□ -0.31
MAP1LC3B-201ENST00000268607 DOLPP1Q86YN1 238 aa13.14□□□□□ -0.31
MAP1LC3B-201ENST00000268607 CRYBG3Q68DQ2 2970 aa13.13□□□□□ -0.31
MAP1LC3B-201ENST00000268607 GAGE12BA1L429 117 aa13.13□□□□□ -0.31
MAP1LC3B-201ENST00000268607 C15orf62A8K5M9 175 aa13.13□□□□□ -0.31
MAP1LC3B-201ENST00000268607 AHRRA9YTQ3 701 aa13.13□□□□□ -0.31
MAP1LC3B-201ENST00000268607 PSPNO60542 156 aa13.13□□□□□ -0.31
MAP1LC3B-201ENST00000268607 TMEM249Q2WGJ8 235 aa13.13□□□□□ -0.31
MAP1LC3B-201ENST00000268607 ST6GALNAC6Q969X2 333 aa13.13□□□□□ -0.31
MAP1LC3B-201ENST00000268607 SFXN3Q9BWM7 321 aa13.13□□□□□ -0.31
MAP1LC3B-201ENST00000268607 ZNF430Q9H8G1 570 aaPredicted RBP13.13□□□□□ -0.31
MAP1LC3B-201ENST00000268607 ERVK11-1P61568 191 aa13.13□□□□□ -0.31
MAP1LC3B-201ENST00000268607 SVEP1Q4LDE5 3571 aa13.13□□□□□ -0.31
MAP1LC3B-201ENST00000268607 MIC13Q5XKP0 118 aa13.13□□□□□ -0.31
MAP1LC3B-201ENST00000268607 USF3Q68DE3 2245 aa13.13□□□□□ -0.31
MAP1LC3B-201ENST00000268607 C16orf54Q6UWD8 224 aa13.13□□□□□ -0.31
MAP1LC3B-201ENST00000268607 H2BFWTQ7Z2G1 175 aa13.13□□□□□ -0.31
MAP1LC3B-201ENST00000268607 WFDC8Q8IUA0 241 aa13.13□□□□□ -0.31
MAP1LC3B-201ENST00000268607 ZNF645Q8N7E2 425 aa13.13□□□□□ -0.31
MAP1LC3B-201ENST00000268607 NEUROG1Q92886 237 aa13.13□□□□□ -0.31
MAP1LC3B-201ENST00000268607 MRPL27Q9P0M9 148 aaKnown RBP13.13□□□□□ -0.31
MAP1LC3B-201ENST00000268607 AKAP6Q13023 2319 aa13.12□□□□□ -0.31
MAP1LC3B-201ENST00000268607 IQCF6A8MYZ5 107 aa13.12□□□□□ -0.31
MAP1LC3B-201ENST00000268607 TIMM8AO60220 97 aaPredicted RBP13.12□□□□□ -0.31
MAP1LC3B-201ENST00000268607 SAP30O75446 220 aa13.12□□□□□ -0.31
MAP1LC3B-201ENST00000268607 IGKV3-15P01624 115 aa13.12□□□□□ -0.31
MAP1LC3B-201ENST00000268607 STAG3L2P0CL84 134 aa13.12□□□□□ -0.31
MAP1LC3B-201ENST00000268607 STAG3L3P0CL85 134 aa13.12□□□□□ -0.31
MAP1LC3B-201ENST00000268607 SRIP30626 198 aa13.12□□□□□ -0.31
MAP1LC3B-201ENST00000268607 Q56UQ5 140 aa13.12□□□□□ -0.31
MAP1LC3B-201ENST00000268607 MOB1BQ7L9L4 216 aa13.12□□□□□ -0.31
MAP1LC3B-201ENST00000268607 TPRX1Q8N7U7 411 aa13.12□□□□□ -0.31
MAP1LC3B-201ENST00000268607 SMIM12Q96EX1 92 aa13.12□□□□□ -0.31
MAP1LC3B-201ENST00000268607 GNB1LQ9BYB4 327 aa13.12□□□□□ -0.31
MAP1LC3B-201ENST00000268607 CHODLQ9H9P2 273 aa13.12□□□□□ -0.31
MAP1LC3B-201ENST00000268607 POLDIP2Q9Y2S7 368 aa13.12□□□□□ -0.31
MAP1LC3B-201ENST00000268607 FAM27E3Q08E93 113 aa13.12□□□□□ -0.31
MAP1LC3B-201ENST00000268607 OR10J3Q5JRS4 329 aa13.12□□□□□ -0.31
MAP1LC3B-201ENST00000268607 ZNF474Q6S9Z5 364 aaPredicted RBP13.12□□□□□ -0.31
MAP1LC3B-201ENST00000268607 TSKUQ8WUA8 353 aa13.12□□□□□ -0.31
MAP1LC3B-201ENST00000268607 WASHC3Q9Y3C0 194 aa13.12□□□□□ -0.31
MAP1LC3B-201ENST00000268607 V9GYV3 84 aa13.12□□□□□ -0.31
MAP1LC3B-201ENST00000268607 MYO18BQ8IUG5 2567 aa13.11□□□□□ -0.31
MAP1LC3B-201ENST00000268607 TRAV9-2A0A087WT02 112 aa13.11□□□□□ -0.31
MAP1LC3B-201ENST00000268607 SAA2-SAA4A0A096LPE2 208 aa13.11□□□□□ -0.31
MAP1LC3B-201ENST00000268607 CLDN14O95500 239 aa13.11□□□□□ -0.31
MAP1LC3B-201ENST00000268607 CXorf1O96002 111 aa13.11□□□□□ -0.31
MAP1LC3B-201ENST00000268607 NBEAP1P0C6P0 100 aa13.11□□□□□ -0.31
MAP1LC3B-201ENST00000268607 RPS20P60866 119 aaKnown RBP13.11□□□□□ -0.31
MAP1LC3B-201ENST00000268607 ZNF718Q3SXZ3 478 aa13.11□□□□□ -0.31
MAP1LC3B-201ENST00000268607 Q6ZR03 302 aa13.11□□□□□ -0.31
MAP1LC3B-201ENST00000268607 ZC2HC1AQ96GY0 325 aa13.11□□□□□ -0.31
MAP1LC3B-201ENST00000268607 EAF1Q96JC9 268 aaPredicted RBP13.11□□□□□ -0.31
MAP1LC3B-201ENST00000268607 AESQ08117 197 aa13.11□□□□□ -0.31
MAP1LC3B-201ENST00000268607 PDLIM3Q53GG5 364 aaPredicted RBP13.11□□□□□ -0.31
MAP1LC3B-201ENST00000268607 TXNDC17Q9BRA2 123 aa13.11□□□□□ -0.31
MAP1LC3B-201ENST00000268607 HAND1O96004 215 aa13.1□□□□□ -0.31
MAP1LC3B-201ENST00000268607 TCL1AP56279 114 aa13.1□□□□□ -0.31
MAP1LC3B-201ENST00000268607 PMCHL1Q16048 86 aa13.1□□□□□ -0.31
MAP1LC3B-201ENST00000268607 TREML4Q6UXN2 200 aa13.1□□□□□ -0.31
MAP1LC3B-201ENST00000268607 C11orf53Q8IXP5 236 aa13.1□□□□□ -0.31
MAP1LC3B-201ENST00000268607 OR52L2PQ8NGH6 319 aa13.1□□□□□ -0.31
MAP1LC3B-201ENST00000268607 DUSP13Q9UII6 198 aa13.1□□□□□ -0.31
MAP1LC3B-201ENST00000268607 METRNQ9UJH8 293 aa13.1□□□□□ -0.31
MAP1LC3B-201ENST00000268607 PROCRQ9UNN8 238 aa13.1□□□□□ -0.31
MAP1LC3B-201ENST00000268607 C19orf35Q6ZS72 473 aa13.1□□□□□ -0.31
MAP1LC3B-201ENST00000268607 MGST2Q99735 147 aa13.1□□□□□ -0.31
MAP1LC3B-201ENST00000268607 PLSCR4Q9NRQ2 329 aa13.1□□□□□ -0.31
MAP1LC3B-201ENST00000268607 TRBV9A0A0B4J1U6 114 aa13.09□□□□□ -0.31
MAP1LC3B-201ENST00000268607 IGHV1-18A0A0C4DH31 117 aa13.09□□□□□ -0.31
MAP1LC3B-201ENST00000268607 RAB29O14966 203 aa13.09□□□□□ -0.31
MAP1LC3B-201ENST00000268607 NUDT3O95989 172 aa13.09□□□□□ -0.31
MAP1LC3B-201ENST00000268607 FXYD3Q14802 87 aa13.09□□□□□ -0.31
MAP1LC3B-201ENST00000268607 SPATA31B1PQ5VZV4 182 aa13.09□□□□□ -0.31
MAP1LC3B-201ENST00000268607 TMEM136Q6ZRR5 245 aa13.09□□□□□ -0.31
MAP1LC3B-201ENST00000268607 FAM57AQ8TBR7 257 aa13.09□□□□□ -0.31
MAP1LC3B-201ENST00000268607 SSMEM1Q8WWF3 244 aa13.09□□□□□ -0.31
MAP1LC3B-201ENST00000268607 CENPEQ02224 2701 aa13.09□□□□□ -0.31
MAP1LC3B-201ENST00000268607 CORTO00230 105 aa13.09□□□□□ -0.31
MAP1LC3B-201ENST00000268607 FOXH1O75593 365 aa13.09□□□□□ -0.31
MAP1LC3B-201ENST00000268607 CGAP01215 116 aa13.09□□□□□ -0.31
MAP1LC3B-201ENST00000268607 OPRK1P41145 380 aa13.09□□□□□ -0.31
MAP1LC3B-201ENST00000268607 CATR1Q13166 79 aa13.09□□□□□ -0.31
MAP1LC3B-201ENST00000268607 ZNF146Q15072 292 aa13.09□□□□□ -0.31
MAP1LC3B-201ENST00000268607 RNASE7Q9H1E1 156 aaKnown RBP13.09□□□□□ -0.31
MAP1LC3B-201ENST00000268607 MBNL3Q9NUK0 354 aaKnown RBP13.09□□□□□ -0.31
MAP1LC3B-201ENST00000268607 A0A0G2JNJ9 132 aa13.08□□□□□ -0.31
MAP1LC3B-201ENST00000268607 MBD3L4A6NDZ8 208 aaPredicted RBP13.08□□□□□ -0.31
MAP1LC3B-201ENST00000268607 MBD3L3A6NE82 208 aaPredicted RBP13.08□□□□□ -0.31
MAP1LC3B-201ENST00000268607 MBD3L5A6NJ08 208 aaPredicted RBP13.08□□□□□ -0.31
MAP1LC3B-201ENST00000268607 J3QW42 95 aa13.08□□□□□ -0.31
MAP1LC3B-201ENST00000268607 BMPR1BO00238 502 aa13.08□□□□□ -0.31
MAP1LC3B-201ENST00000268607 GCHFRP30047 84 aa13.08□□□□□ -0.31
MAP1LC3B-201ENST00000268607 EIF4EBP1Q13541 118 aaPredicted RBP13.08□□□□□ -0.31
MAP1LC3B-201ENST00000268607 MSMPQ1L6U9 139 aa13.08□□□□□ -0.31
MAP1LC3B-201ENST00000268607 Q8IYB0 196 aa13.08□□□□□ -0.31
MAP1LC3B-201ENST00000268607 MBD3L2Q8NHZ7 208 aaPredicted RBP13.08□□□□□ -0.31
MAP1LC3B-201ENST00000268607 MS4A5Q9H3V2 200 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms