RNA–Protein interactions for RNA: ENST00000262962.11

CCDC94-201, Transcript of Coiled-coil domain-containing protein 94, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC94, Length 1,434 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94-201ENST00000262962 SPATA3Q8NHX4 192 aa13.19□□□□□ -0.3
CCDC94-201ENST00000262962 CHAC2Q8WUX2 184 aa13.19□□□□□ -0.3
CCDC94-201ENST00000262962 USMG5Q96IX5 58 aa13.19□□□□□ -0.3
CCDC94-201ENST00000262962 C11orf1Q9H5F2 150 aa13.19□□□□□ -0.3
CCDC94-201ENST00000262962 FBXL7Q9UJT9 491 aa13.19□□□□□ -0.3
CCDC94-201ENST00000262962 STRAPQ9Y3F4 350 aaKnown RBP13.19□□□□□ -0.3
CCDC94-201ENST00000262962 A0A0G2JLM5 398 aa13.18□□□□□ -0.3
CCDC94-201ENST00000262962 A0A1B0GVG6 124 aa13.18□□□□□ -0.3
CCDC94-201ENST00000262962 TCRBV4S1A1TA0A5B7 111 aa13.18□□□□□ -0.3
CCDC94-201ENST00000262962 C15orf62A8K5M9 175 aa13.18□□□□□ -0.3
CCDC94-201ENST00000262962 TSC22D2O75157 780 aa13.18□□□□□ -0.3
CCDC94-201ENST00000262962 RAB11AP62491 216 aa13.18□□□□□ -0.3
CCDC94-201ENST00000262962 SPANXN5Q5MJ07 72 aa13.18□□□□□ -0.3
CCDC94-201ENST00000262962 ZNF491Q8N8L2 437 aa13.18□□□□□ -0.3
CCDC94-201ENST00000262962 C11orf44Q8N8P7 122 aa13.18□□□□□ -0.3
CCDC94-201ENST00000262962 TMEM170AQ8WVE7 144 aa13.18□□□□□ -0.3
CCDC94-201ENST00000262962 MISP3Q96FF7 219 aa13.18□□□□□ -0.3
CCDC94-201ENST00000262962 CITED1Q99966 193 aa13.18□□□□□ -0.3
CCDC94-201ENST00000262962 ZNF747Q9BV97 191 aa13.18□□□□□ -0.3
CCDC94-201ENST00000262962 E5RGE8 158 aa13.17□□□□□ -0.3
CCDC94-201ENST00000262962 H3BP45 60 aa13.17□□□□□ -0.3
CCDC94-201ENST00000262962 NDUFB8O95169 186 aa13.17□□□□□ -0.3
CCDC94-201ENST00000262962 OR8U8P0C7N1 319 aa13.17□□□□□ -0.3
CCDC94-201ENST00000262962 BCAP31P51572 246 aa13.17□□□□□ -0.3
CCDC94-201ENST00000262962 ATP5G2Q06055 141 aa13.17□□□□□ -0.3
CCDC94-201ENST00000262962 FGL1Q08830 312 aa13.17□□□□□ -0.3
CCDC94-201ENST00000262962 EXOSC2Q13868 293 aaKnown RBP13.17□□□□□ -0.3
CCDC94-201ENST00000262962 KIAA0141Q14154 515 aaPredicted RBP13.17□□□□□ -0.3
CCDC94-201ENST00000262962 C15orf32Q32M92 178 aa13.17□□□□□ -0.3
CCDC94-201ENST00000262962 RNASEH2CQ8TDP1 164 aaKnown RBP13.17□□□□□ -0.3
CCDC94-201ENST00000262962 UBE2E2Q96LR5 201 aa13.17□□□□□ -0.3
CCDC94-201ENST00000262962 OR4C12Q96R67 309 aa13.17□□□□□ -0.3
CCDC94-201ENST00000262962 TSSC4Q9Y5U2 329 aaPredicted RBP13.17□□□□□ -0.3
CCDC94-201ENST00000262962 STAB1Q9NY15 2570 aa13.17□□□□□ -0.3
CCDC94-201ENST00000262962 H0YIZ8 118 aa13.16□□□□□ -0.3
CCDC94-201ENST00000262962 CDX1P47902 265 aaPredicted RBP13.16□□□□□ -0.3
CCDC94-201ENST00000262962 DEFA5Q01523 94 aa13.16□□□□□ -0.3
CCDC94-201ENST00000262962 KHDC1LQ5JSQ8 128 aa13.16□□□□□ -0.3
CCDC94-201ENST00000262962 PRSS54Q6PEW0 395 aa13.16□□□□□ -0.3
CCDC94-201ENST00000262962 CXorf58Q96LI9 332 aa13.16□□□□□ -0.3
CCDC94-201ENST00000262962 CITED2Q99967 270 aaPredicted RBP13.16□□□□□ -0.3
CCDC94-201ENST00000262962 LYRM2Q9NU23 88 aaPredicted RBP13.16□□□□□ -0.3
CCDC94-201ENST00000262962 OR5AC2Q9NZP5 309 aa13.16□□□□□ -0.3
CCDC94-201ENST00000262962 PAIP2BQ9ULR5 123 aaKnown RBP13.16□□□□□ -0.3
CCDC94-201ENST00000262962 K7EIM0 57 aa13.15□□□□□ -0.3
CCDC94-201ENST00000262962 IFNA4P05014 189 aa13.15□□□□□ -0.3
CCDC94-201ENST00000262962 TMEM14EPQ6UXP3 125 aa13.15□□□□□ -0.3
CCDC94-201ENST00000262962 OR2T35Q8NGX2 323 aa13.15□□□□□ -0.3
CCDC94-201ENST00000262962 VN1R17PQ8TDU5 208 aa13.15□□□□□ -0.3
CCDC94-201ENST00000262962 PINX1Q96BK5 328 aaKnown RBP13.15□□□□□ -0.3
CCDC94-201ENST00000262962 RNF126Q9BV68 326 aa13.15□□□□□ -0.3
CCDC94-201ENST00000262962 TRAV14DV4A0A0A6YYC5 116 aa13.14□□□□□ -0.31
CCDC94-201ENST00000262962 RPS10-NUDT3A0A1W2PQS6 291 aa13.14□□□□□ -0.31
CCDC94-201ENST00000262962 I3L2K1 104 aa13.14□□□□□ -0.31
CCDC94-201ENST00000262962 MT-CO2P00403 227 aa13.14□□□□□ -0.31
CCDC94-201ENST00000262962 LYL1P12980 280 aa13.14□□□□□ -0.31
CCDC94-201ENST00000262962 P2RY1P47900 373 aa13.14□□□□□ -0.31
CCDC94-201ENST00000262962 CAV2P51636 162 aa13.14□□□□□ -0.31
CCDC94-201ENST00000262962 ETV3LQ6ZN32 361 aa13.14□□□□□ -0.31
CCDC94-201ENST00000262962 NDUFA11Q86Y39 141 aa13.14□□□□□ -0.31
CCDC94-201ENST00000262962 THAP6Q8TBB0 222 aa13.14□□□□□ -0.31
CCDC94-201ENST00000262962 MBD2Q9UBB5 411 aa13.14□□□□□ -0.31
CCDC94-201ENST00000262962 TRBV7-1A0A0A6YYK4 115 aa13.13□□□□□ -0.31
CCDC94-201ENST00000262962 MFSD2BA6NFX1 497 aa13.13□□□□□ -0.31
CCDC94-201ENST00000262962 OPRK1P41145 380 aa13.13□□□□□ -0.31
CCDC94-201ENST00000262962 FAM209BQ5JX69 171 aa13.13□□□□□ -0.31
CCDC94-201ENST00000262962 HIST2H2BDQ6DRA6 164 aa13.13□□□□□ -0.31
CCDC94-201ENST00000262962 ETFRF1Q6IPR1 90 aa13.13□□□□□ -0.31
CCDC94-201ENST00000262962 ZNF343Q6P1L6 599 aa13.13□□□□□ -0.31
CCDC94-201ENST00000262962 C4orf3Q8WVX3 66 aa13.13□□□□□ -0.31
CCDC94-201ENST00000262962 EEF1AKMT3Q96AZ1 226 aa13.13□□□□□ -0.31
CCDC94-201ENST00000262962 FNDC4Q9H6D8 234 aaPredicted RBP13.13□□□□□ -0.31
CCDC94-201ENST00000262962 GNB4Q9HAV0 340 aa13.13□□□□□ -0.31
CCDC94-201ENST00000262962 RANGRFQ9HD47 186 aaPredicted RBP13.13□□□□□ -0.31
CCDC94-201ENST00000262962 FAM24AA6NFZ4 105 aa13.13□□□□□ -0.31
CCDC94-201ENST00000262962 CCNKO75909 580 aa13.13□□□□□ -0.31
CCDC94-201ENST00000262962 SCAF4O95104 1147 aaKnown RBP13.13□□□□□ -0.31
CCDC94-201ENST00000262962 IGHV3-11P01762 117 aa13.13□□□□□ -0.31
CCDC94-201ENST00000262962 METTL15P1P0C7V9 234 aa13.13□□□□□ -0.31
CCDC94-201ENST00000262962 RUNX1Q01196 453 aa13.13□□□□□ -0.31
CCDC94-201ENST00000262962 CD69Q07108 199 aa13.13□□□□□ -0.31
CCDC94-201ENST00000262962 SHISA2Q6UWI4 295 aa13.13□□□□□ -0.31
CCDC94-201ENST00000262962 KLHL30-AS1Q8NEE0 82 aa13.13□□□□□ -0.31
CCDC94-201ENST00000262962 SCARB1Q8WTV0 552 aa13.13□□□□□ -0.31
CCDC94-201ENST00000262962 ATP6V0BQ99437 205 aa13.13□□□□□ -0.31
CCDC94-201ENST00000262962 IGHV3-21A0A0B4J1V1 117 aa13.12□□□□□ -0.31
CCDC94-201ENST00000262962 PMS2P5A8MQ11 134 aa13.12□□□□□ -0.31
CCDC94-201ENST00000262962 ADARB2-AS1A8MUL3 147 aa13.12□□□□□ -0.31
CCDC94-201ENST00000262962 PRSS46E5RG02 174 aa13.12□□□□□ -0.31
CCDC94-201ENST00000262962 LGALS1P09382 135 aaKnown RBP13.12□□□□□ -0.31
CCDC94-201ENST00000262962 SLC25A4P12235 298 aa13.12□□□□□ -0.31
CCDC94-201ENST00000262962 GPX4P36969 197 aaPredicted RBP13.12□□□□□ -0.31
CCDC94-201ENST00000262962 Q5BKY6 102 aa13.12□□□□□ -0.31
CCDC94-201ENST00000262962 AKAP14Q86UN6 197 aa13.12□□□□□ -0.31
CCDC94-201ENST00000262962 STX12Q86Y82 276 aa13.12□□□□□ -0.31
CCDC94-201ENST00000262962 TMEM252Q8N6L7 170 aa13.12□□□□□ -0.31
CCDC94-201ENST00000262962 ZNF502Q8TBZ5 544 aa13.12□□□□□ -0.31
CCDC94-201ENST00000262962 CACNG8Q8WXS5 425 aa13.12□□□□□ -0.31
CCDC94-201ENST00000262962 DCUN1D4Q92564 292 aa13.12□□□□□ -0.31
CCDC94-201ENST00000262962 ST6GAL2Q96JF0 529 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms