RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 TUBD1Q9UJT1 453 aa13.28□□□□□ -0.28
SHANK3-201ENST00000262795 ADARB2-AS1A8MUL3 147 aa13.28□□□□□ -0.28
SHANK3-201ENST00000262795 FAM206AQ9NX38 181 aa13.28□□□□□ -0.28
SHANK3-201ENST00000262795 GCM2O75603 506 aaPredicted RBP13.28□□□□□ -0.28
SHANK3-201ENST00000262795 CLDN16Q9Y5I7 305 aa13.28□□□□□ -0.28
SHANK3-201ENST00000262795 GREM1O60565 184 aa13.28□□□□□ -0.28
SHANK3-201ENST00000262795 IL6RP08887 468 aaPredicted RBP13.27□□□□□ -0.28
SHANK3-201ENST00000262795 ERGP11308 486 aa13.27□□□□□ -0.28
SHANK3-201ENST00000262795 CD8AP01732 235 aa13.27□□□□□ -0.28
SHANK3-201ENST00000262795 C8orf88P0DMB2 117 aa13.27□□□□□ -0.28
SHANK3-201ENST00000262795 NABP2Q9BQ15 211 aa13.27□□□□□ -0.28
SHANK3-201ENST00000262795 PARLQ9H300 379 aa13.27□□□□□ -0.28
SHANK3-201ENST00000262795 JKAMPQ9P055 326 aa13.27□□□□□ -0.28
SHANK3-201ENST00000262795 C1orf122Q6ZSJ8 110 aa13.27□□□□□ -0.29
SHANK3-201ENST00000262795 ZDBF2Q9HCK1 2354 aa13.27□□□□□ -0.29
SHANK3-201ENST00000262795 PAX8Q06710 450 aa13.27□□□□□ -0.29
SHANK3-201ENST00000262795 PRADC1Q9BSG0 188 aa13.27□□□□□ -0.29
SHANK3-201ENST00000262795 TRAV8-2A0A0B4J237 113 aa13.27□□□□□ -0.29
SHANK3-201ENST00000262795 COL5A3P25940 1745 aaPredicted RBP13.26□□□□□ -0.29
SHANK3-201ENST00000262795 F5H768 121 aa13.26□□□□□ -0.29
SHANK3-201ENST00000262795 KIAA1644Q3SXP7 199 aa13.26□□□□□ -0.29
SHANK3-201ENST00000262795 PARP14Q460N5 1801 aa13.26□□□□□ -0.29
SHANK3-201ENST00000262795 MLNRO43193 412 aa13.26□□□□□ -0.29
SHANK3-201ENST00000262795 NPC2P61916 151 aa13.26□□□□□ -0.29
SHANK3-201ENST00000262795 FUT5Q11128 374 aa13.26□□□□□ -0.29
SHANK3-201ENST00000262795 TMEM249Q2WGJ8 235 aa13.26□□□□□ -0.29
SHANK3-201ENST00000262795 TMEM133Q9H2Q1 129 aa13.26□□□□□ -0.29
SHANK3-201ENST00000262795 UQCR10Q9UDW1 63 aa13.26□□□□□ -0.29
SHANK3-201ENST00000262795 IGLV1-36A0A0B4J1U3 117 aa13.26□□□□□ -0.29
SHANK3-201ENST00000262795 TM4SF5O14894 197 aa13.26□□□□□ -0.29
SHANK3-201ENST00000262795 IGHV1-46P01743 117 aa13.26□□□□□ -0.29
SHANK3-201ENST00000262795 JOSD1Q15040 202 aaPredicted RBP13.26□□□□□ -0.29
SHANK3-201ENST00000262795 IGFBP2P18065 325 aa13.26□□□□□ -0.29
SHANK3-201ENST00000262795 MYO7BQ6PIF6 2116 aa13.26□□□□□ -0.29
SHANK3-201ENST00000262795 NDUFA3O95167 84 aa13.26□□□□□ -0.29
SHANK3-201ENST00000262795 HOXA6P31267 233 aa13.26□□□□□ -0.29
SHANK3-201ENST00000262795 C14orf144Q96I85 54 aa13.25□□□□□ -0.29
SHANK3-201ENST00000262795 SCAND1P57086 179 aa13.25□□□□□ -0.29
SHANK3-201ENST00000262795 RPS20P60866 119 aaKnown RBP13.25□□□□□ -0.29
SHANK3-201ENST00000262795 COL8A2P25067 703 aa13.25□□□□□ -0.29
SHANK3-201ENST00000262795 KCNE5Q9UJ90 142 aa13.25□□□□□ -0.29
SHANK3-201ENST00000262795 DMRT1Q9Y5R6 373 aa13.25□□□□□ -0.29
SHANK3-201ENST00000262795 WDR90Q96KV7 1748 aa13.25□□□□□ -0.29
SHANK3-201ENST00000262795 NPIPB8E9PQR5 432 aa13.25□□□□□ -0.29
SHANK3-201ENST00000262795 NPIPB9F8W1W9 429 aa13.25□□□□□ -0.29
SHANK3-201ENST00000262795 NPIPB7O75200 414 aa13.25□□□□□ -0.29
SHANK3-201ENST00000262795 CA7P43166 264 aa13.25□□□□□ -0.29
SHANK3-201ENST00000262795 HMGA2P52926 109 aa13.25□□□□□ -0.29
SHANK3-201ENST00000262795 MRPL18Q9H0U6 180 aaKnown RBP13.25□□□□□ -0.29
SHANK3-201ENST00000262795 SAA2-SAA4A0A096LPE2 208 aa13.25□□□□□ -0.29
SHANK3-201ENST00000262795 IGKV1D-43A0A0B4J1Z2 117 aa13.25□□□□□ -0.29
SHANK3-201ENST00000262795 C12orf77C9JDV5 145 aa13.25□□□□□ -0.29
SHANK3-201ENST00000262795 SAA2P0DJI9 122 aaPredicted RBP13.25□□□□□ -0.29
SHANK3-201ENST00000262795 FHITP49789 147 aa13.24□□□□□ -0.29
SHANK3-201ENST00000262795 ATRAIDQ6UW56 229 aa13.24□□□□□ -0.29
SHANK3-201ENST00000262795 COX5BP10606 129 aa13.24□□□□□ -0.29
SHANK3-201ENST00000262795 TUBGCP6Q96RT7 1819 aa13.24□□□□□ -0.29
SHANK3-201ENST00000262795 LINC00312Q9Y6C7 94 aa13.24□□□□□ -0.29
SHANK3-201ENST00000262795 CEACAM8P31997 349 aaPredicted RBP13.24□□□□□ -0.29
SHANK3-201ENST00000262795 CR1LQ2VPA4 569 aa13.24□□□□□ -0.29
SHANK3-201ENST00000262795 IMMP1LQ96LU5 166 aa13.24□□□□□ -0.29
SHANK3-201ENST00000262795 YLPM1P49750 1951 aaKnown RBP13.24□□□□□ -0.29
SHANK3-201ENST00000262795 C17orf98A8MV24 154 aa13.24□□□□□ -0.29
SHANK3-201ENST00000262795 K7ENP7 123 aa13.24□□□□□ -0.29
SHANK3-201ENST00000262795 SLC25A20O43772 301 aa13.24□□□□□ -0.29
SHANK3-201ENST00000262795 FNDC4Q9H6D8 234 aaPredicted RBP13.24□□□□□ -0.29
SHANK3-201ENST00000262795 PEX7O00628 323 aa13.23□□□□□ -0.29
SHANK3-201ENST00000262795 PSPNO60542 156 aa13.23□□□□□ -0.29
SHANK3-201ENST00000262795 ZFP36L1Q07352 338 aaKnown RBP13.23□□□□□ -0.29
SHANK3-201ENST00000262795 SLC25A34Q6PIV7 304 aa13.23□□□□□ -0.29
SHANK3-201ENST00000262795 TMEM183AQ8IXX5 376 aa13.23□□□□□ -0.29
SHANK3-201ENST00000262795 RCHY1Q96PM5 261 aa13.23□□□□□ -0.29
SHANK3-201ENST00000262795 TMEM222Q9H0R3 208 aa13.23□□□□□ -0.29
SHANK3-201ENST00000262795 OR11H12B2RN74 326 aa13.23□□□□□ -0.29
SHANK3-201ENST00000262795 HIST1H2BAQ96A08 127 aa13.23□□□□□ -0.29
SHANK3-201ENST00000262795 COL6A6A6NMZ7 2263 aa13.23□□□□□ -0.29
SHANK3-201ENST00000262795 RPL15P61313 204 aaKnown RBP13.23□□□□□ -0.29
SHANK3-201ENST00000262795 SIGLEC15Q6ZMC9 328 aa13.23□□□□□ -0.29
SHANK3-201ENST00000262795 BIVMQ86UB2 503 aa13.23□□□□□ -0.29
SHANK3-201ENST00000262795 COL4A1P02462 1669 aa13.23□□□□□ -0.29
SHANK3-201ENST00000262795 H2BFSP57053 126 aa13.23□□□□□ -0.29
SHANK3-201ENST00000262795 COX19Q49B96 90 aa13.23□□□□□ -0.29
SHANK3-201ENST00000262795 SEC16AO15027 2179 aa13.23□□□□□ -0.29
SHANK3-201ENST00000262795 A6NNC1 897 aa13.22□□□□□ -0.29
SHANK3-201ENST00000262795 NIT1Q86X76 327 aa13.22□□□□□ -0.29
SHANK3-201ENST00000262795 MRPL14Q6P1L8 145 aaKnown RBP13.22□□□□□ -0.29
SHANK3-201ENST00000262795 COPS9Q8WXC6 57 aa13.22□□□□□ -0.29
SHANK3-201ENST00000262795 GPR132Q9UNW8 380 aa13.22□□□□□ -0.29
SHANK3-201ENST00000262795 PSME4Q14997 1843 aa13.22□□□□□ -0.29
SHANK3-201ENST00000262795 IGKV1D-42A0A075B6H8 117 aa13.22□□□□□ -0.29
SHANK3-201ENST00000262795 SELLP14151 372 aa13.22□□□□□ -0.29
SHANK3-201ENST00000262795 POC1AQ8NBT0 407 aa13.22□□□□□ -0.29
SHANK3-201ENST00000262795 BCL2P10415 239 aa13.21□□□□□ -0.29
SHANK3-201ENST00000262795 TAF15Q92804 592 aaKnown RBP eCLIP13.21□□□□□ -0.292e-6■■□□□ 11.9
SHANK3-201ENST00000262795 G6PC2Q9NQR9 355 aa13.21□□□□□ -0.29
SHANK3-201ENST00000262795 ANKRD36A6QL64 1941 aa13.21□□□□□ -0.29
SHANK3-201ENST00000262795 A0A096LPF7 62 aa13.21□□□□□ -0.29
SHANK3-201ENST00000262795 SLC25A16P16260 332 aa13.21□□□□□ -0.29
SHANK3-201ENST00000262795 ZNF345Q14585 488 aa13.21□□□□□ -0.29
SHANK3-201ENST00000262795 NHLRC3Q5JS37 347 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms