RNA–Protein interactions for RNA: ENST00000250066.6

USP6-201, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 7,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-201ENST00000250066 NDUFAF3Q9BU61 184 aa7.37□□□□□ -1.23
USP6-201ENST00000250066 EFNB1P98172 346 aa7.36□□□□□ -1.23
USP6-201ENST00000250066 ZNF826PQ6ZT77 177 aa7.36□□□□□ -1.23
USP6-201ENST00000250066 LTBP4Q8N2S1 1624 aa7.36□□□□□ -1.23
USP6-201ENST00000250066 TRAV8-3A0A0A6YYJ7 113 aa7.36□□□□□ -1.23
USP6-201ENST00000250066 CT83Q5H943 113 aa7.36□□□□□ -1.23
USP6-201ENST00000250066 FAM27BQ5VT28 67 aa7.36□□□□□ -1.23
USP6-201ENST00000250066 PRADC1Q9BSG0 188 aa7.36□□□□□ -1.23
USP6-201ENST00000250066 Q9H3A6 140 aa7.36□□□□□ -1.23
USP6-201ENST00000250066 CTGFP29279 349 aa7.36□□□□□ -1.23
USP6-201ENST00000250066 RBBP6Q7Z6E9 1792 aaKnown RBP7.36□□□□□ -1.23
USP6-201ENST00000250066 COL22A1Q8NFW1 1626 aaPredicted RBP7.36□□□□□ -1.23
USP6-201ENST00000250066 IGHV3OR16-10A0A075B7F0 116 aa7.36□□□□□ -1.23
USP6-201ENST00000250066 TRACP01848 142 aa7.36□□□□□ -1.23
USP6-201ENST00000250066 CD300EQ496F6 205 aaPredicted RBP7.36□□□□□ -1.23
USP6-201ENST00000250066 ISXQ2M1V0 245 aa7.36□□□□□ -1.23
USP6-201ENST00000250066 ARPC1AQ92747 370 aa7.36□□□□□ -1.23
USP6-201ENST00000250066 SCARF2Q96GP6 870 aaPredicted RBP7.36□□□□□ -1.23
USP6-201ENST00000250066 LINC01549A6NIU2 74 aa7.36□□□□□ -1.23
USP6-201ENST00000250066 ATP5L2Q7Z4Y8 100 aa7.36□□□□□ -1.23
USP6-201ENST00000250066 PNKDQ8N490 385 aa7.36□□□□□ -1.23
USP6-201ENST00000250066 FBXL7Q9UJT9 491 aa7.36□□□□□ -1.23
USP6-201ENST00000250066 RNF115Q9Y4L5 304 aa7.36□□□□□ -1.23
USP6-201ENST00000250066 PLXNA1Q9UIW2 1896 aa7.36□□□□□ -1.23
USP6-201ENST00000250066 MESP2Q0VG99 397 aa7.35□□□□□ -1.23
USP6-201ENST00000250066 C6orf226Q5I0X4 101 aa7.35□□□□□ -1.23
USP6-201ENST00000250066 SPRED2Q7Z698 418 aa7.35□□□□□ -1.23
USP6-201ENST00000250066 LINC01555Q8NAE3 123 aa7.35□□□□□ -1.23
USP6-201ENST00000250066 RCC1LQ96I51 464 aaKnown RBP7.35□□□□□ -1.23
USP6-201ENST00000250066 COL11A1P12107 1806 aaPredicted RBP7.35□□□□□ -1.23
USP6-201ENST00000250066 SMAD7O15105 426 aaKnown RBP7.35□□□□□ -1.23
USP6-201ENST00000250066 UCNP55089 124 aa7.35□□□□□ -1.23
USP6-201ENST00000250066 LAGE3Q14657 143 aa7.35□□□□□ -1.23
USP6-201ENST00000250066 S4R3C0 116 aa7.35□□□□□ -1.23
USP6-201ENST00000250066 ZNF114Q8NC26 417 aa7.35□□□□□ -1.23
USP6-201ENST00000250066 SVIPQ8NHG7 77 aa7.35□□□□□ -1.23
USP6-201ENST00000250066 IFI27L1Q96BM0 104 aa7.35□□□□□ -1.23
USP6-201ENST00000250066 DLL3Q9NYJ7 618 aa7.35□□□□□ -1.23
USP6-201ENST00000250066 JPT1Q9UK76 154 aa7.35□□□□□ -1.23
USP6-201ENST00000250066 GREB1Q4ZG55 1949 aa7.35□□□□□ -1.23
USP6-201ENST00000250066 INAFM2P0DMQ5 153 aa7.35□□□□□ -1.23
USP6-201ENST00000250066 EGR4Q05215 589 aa7.35□□□□□ -1.23
USP6-201ENST00000250066 C21orf62Q9NYP8 219 aa7.35□□□□□ -1.23
USP6-201ENST00000250066 A0A1W2PPC1 479 aa7.35□□□□□ -1.23
USP6-201ENST00000250066 A8MXK9 166 aa7.35□□□□□ -1.23
USP6-201ENST00000250066 AHRRA9YTQ3 701 aa7.35□□□□□ -1.23
USP6-201ENST00000250066 LILRA1O75019 489 aa7.35□□□□□ -1.23
USP6-201ENST00000250066 PSG4Q00888 419 aa7.35□□□□□ -1.23
USP6-201ENST00000250066 CLEC19AQ6UXS0 136 aa7.35□□□□□ -1.23
USP6-201ENST00000250066 Q6ZS52 159 aa7.35□□□□□ -1.23
USP6-201ENST00000250066 CEACAM8P31997 349 aaPredicted RBP7.35□□□□□ -1.23
USP6-201ENST00000250066 RBM3P98179 157 aaKnown RBP7.35□□□□□ -1.23
USP6-201ENST00000250066 LINC01559Q495D7 138 aa7.35□□□□□ -1.23
USP6-201ENST00000250066 MPTX1A8MV57 137 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 EGR2P11161 476 aaPredicted RBP7.34□□□□□ -1.23
USP6-201ENST00000250066 LRP10Q7Z4F1 713 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 RBM38Q9H0Z9 239 aaKnown RBP7.34□□□□□ -1.23
USP6-201ENST00000250066 RNASE7Q9H1E1 156 aaKnown RBP7.34□□□□□ -1.23
USP6-201ENST00000250066 ZP1P60852 638 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 FAM214BQ7L5A3 538 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 SSC5DA1L4H1 1573 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 F2Z2F3 143 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 TMEM240Q5SV17 173 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 PPP1R27Q86WC6 154 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 CHCHD1Q96BP2 118 aaKnown RBP7.34□□□□□ -1.23
USP6-201ENST00000250066 hADV29S1A0JD25 119 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 FAM90A10PA6NDY2 464 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 FAM90A18PA6NE21 464 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 FAM90A16PA6NEW6 464 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 FAM90A20PA6NIJ5 464 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 FAM90A8PA6NJQ4 464 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 FAM90A7PA6NKC0 464 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 FAM90A22PA8MWA6 464 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 FAM90A12PA8MX19 464 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 FAM90A5PA8MXJ8 464 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 FAM90A23PA8MXZ1 464 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 PRR33A8MZF0 331 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 UPK3AO75631 287 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 TCRAP04437 139 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 FAM90A15PP0C7V4 464 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 FAM90A13PP0C7W8 464 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 FAM90A14PP0C7W9 464 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 FAM90A24PP0C7X0 464 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 C5orf66Q9H5L9 145 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 NDUFS5O43920 106 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 A0A087WWC5 75 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 TMEM8BA6NDV4 472 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 CACNG8Q8WXS5 425 aa7.34□□□□□ -1.23
USP6-201ENST00000250066 UMODP07911 640 aa7.34□□□□□ -1.24
USP6-201ENST00000250066 KCNK17Q96T54 332 aa7.34□□□□□ -1.24
USP6-201ENST00000250066 UBL5Q9BZL1 73 aa7.34□□□□□ -1.24
USP6-201ENST00000250066 SOCS3O14543 225 aa7.33□□□□□ -1.24
USP6-201ENST00000250066 HAPLN4Q86UW8 402 aa7.33□□□□□ -1.24
USP6-201ENST00000250066 PLEKHB2Q96CS7 222 aa7.33□□□□□ -1.24
USP6-201ENST00000250066 FAM60AQ9NP50 221 aa7.33□□□□□ -1.24
USP6-201ENST00000250066 SONP18583 2426 aaKnown RBP7.33□□□□□ -1.24
USP6-201ENST00000250066 IGHV1-69-2A0A0G2JMI3 117 aa7.33□□□□□ -1.24
USP6-201ENST00000250066 NHLRC3Q5JS37 347 aa7.33□□□□□ -1.24
USP6-201ENST00000250066 Q6ZNB5 142 aa7.33□□□□□ -1.24
USP6-201ENST00000250066 BCL6BQ8N143 479 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms