RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 ZNF714Q96N38 554 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 TMEM191AQ9H0A3 160 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 IGHV3-35A0A0C4DH35 117 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 HIST1H1EP10412 219 aaKnown RBP3.84□□□□□ -1.79
VPS13C-201ENST00000249837 FOXF2Q12947 444 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 OR2J3O76001 311 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 ZNF146Q15072 292 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 GOLT1AQ6ZVE7 132 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 ZNF738Q8NE65 137 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 PARD6GQ9BYG4 376 aaPredicted RBP3.84□□□□□ -1.79
VPS13C-201ENST00000249837 WDR83OSQ9Y284 106 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 TET2Q6N021 2002 aaPredicted RBP3.84□□□□□ -1.79
VPS13C-201ENST00000249837 IGHV2OR16-5A0A0B4J2B6 119 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 MT-ND6P03923 174 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 ACSF3Q4G176 576 aaPredicted RBP3.84□□□□□ -1.79
VPS13C-201ENST00000249837 Q6ZT83 130 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 FOXL2NBQ6ZUU3 175 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 OR8B2Q96RD0 313 aa3.84□□□□□ -1.79
VPS13C-201ENST00000249837 A8MWL6 223 aa3.84□□□□□ -1.8
VPS13C-201ENST00000249837 EP400Q96L91 3159 aa3.84□□□□□ -1.8
VPS13C-201ENST00000249837 DPRXA6NFQ7 191 aa3.84□□□□□ -1.8
VPS13C-201ENST00000249837 DUTP33316 252 aaKnown RBP3.84□□□□□ -1.8
VPS13C-201ENST00000249837 JPT1Q9UK76 154 aa3.84□□□□□ -1.8
VPS13C-201ENST00000249837 AHRRA9YTQ3 701 aa3.84□□□□□ -1.8
VPS13C-201ENST00000249837 UPK2O00526 184 aa3.84□□□□□ -1.8
VPS13C-201ENST00000249837 GNG7O60262 68 aa3.84□□□□□ -1.8
VPS13C-201ENST00000249837 OR5R1Q8NH85 324 aa3.84□□□□□ -1.8
VPS13C-201ENST00000249837 GGTLC1Q9BX51 225 aa3.84□□□□□ -1.8
VPS13C-201ENST00000249837 IQCF6A8MYZ5 107 aa3.84□□□□□ -1.8
VPS13C-201ENST00000249837 PYYP10082 97 aa3.84□□□□□ -1.8
VPS13C-201ENST00000249837 GFRA1P56159 465 aa3.84□□□□□ -1.8
VPS13C-201ENST00000249837 MGST2Q99735 147 aa3.84□□□□□ -1.8
VPS13C-201ENST00000249837 GZMBP10144 247 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 CD99P14209 185 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 FCGR2BP31994 310 aaPredicted RBP3.83□□□□□ -1.8
VPS13C-201ENST00000249837 OR10W1Q8NGF6 305 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 TRBV24-1A0A075B6N3 115 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 LY6G6EA0A0G2JKS1 128 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 FOXI3A8MTJ6 420 aaPredicted RBP3.83□□□□□ -1.8
VPS13C-201ENST00000249837 J3KRW8 73 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 IGHV2-5P01817 119 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 ARF6P62330 175 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 ZNF585BQ52M93 769 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 LINC01551Q86U37 167 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 MUC15Q8N387 334 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 OR4B1Q8NGF8 309 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 RAB37Q96AX2 223 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 MRPS18CQ9Y3D5 142 aaKnown RBP3.83□□□□□ -1.8
VPS13C-201ENST00000249837 F11RQ9Y624 299 aaKnown RBP3.83□□□□□ -1.8
VPS13C-201ENST00000249837 U3KQA8 63 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 LNP1A1A4G5 178 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 ETV2O00321 342 aaPredicted RBP3.83□□□□□ -1.8
VPS13C-201ENST00000249837 S100A4P26447 101 aaKnown RBP3.83□□□□□ -1.8
VPS13C-201ENST00000249837 LCN2P80188 198 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 SNAI2O43623 268 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 SP9P0CG40 484 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 FOXC1Q12948 553 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 IGHV3OR16-8A0A075B7F1 116 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 OR4C46A6NHA9 309 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 PPOXP50336 477 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 PKD1L2Q7Z442 2459 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 TRBV6-6A0A0A6YYG2 114 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 EREGO14944 169 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 FTH1P19P0C7X4 201 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 GLRXP35754 106 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 CA7P43166 264 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 TNFSF10P50591 281 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 WFDC3Q8IUB2 231 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 SAA2-SAA4A0A096LPE2 208 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 IGHV3-49A0A0A0MS15 119 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 HLA-DQA1P01909 254 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 SAA2P0DJI9 122 aaPredicted RBP3.83□□□□□ -1.8
VPS13C-201ENST00000249837 RASL11BQ9BPW5 248 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 S4R3C0 116 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 PPIAL4EA0A075B759 164 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 PPIAL4DF5H284 164 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 IGKV1-39P01597 117 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 IGKV1D-39P04432 117 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 PPIAL4FP0DN26 164 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 ZNF124Q15973 351 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 MORN2Q502X0 79 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 LEMD1Q68G75 181 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 STXBP6Q8NFX7 210 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 PPIAL4AQ9Y536 164 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 C15orf62A8K5M9 175 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 MMDQ15546 238 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 GRAMD2BQ96HH9 432 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 FN1P02751 2386 aaKnown RBP3.83□□□□□ -1.8
VPS13C-201ENST00000249837 NMUP48645 174 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 NRN1LQ496H8 165 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 Q6ZS49 121 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 TMEM106BQ9NUM4 274 aa3.83□□□□□ -1.8
VPS13C-201ENST00000249837 ZNF664Q8N3J9 261 aa3.82□□□□□ -1.8
VPS13C-201ENST00000249837 NTN3O00634 580 aaPredicted RBP3.82□□□□□ -1.8
VPS13C-201ENST00000249837 NUDT3O95989 172 aa3.82□□□□□ -1.8
VPS13C-201ENST00000249837 MIEN1Q9BRT3 115 aa3.82□□□□□ -1.8
VPS13C-201ENST00000249837 ZNF841Q6ZN19 808 aa3.82□□□□□ -1.8
VPS13C-201ENST00000249837 COQ2Q96H96 371 aa3.82□□□□□ -1.8
VPS13C-201ENST00000249837 TMUB1Q9BVT8 246 aa3.82□□□□□ -1.8
VPS13C-201ENST00000249837 SCNM1Q9BWG6 230 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms