RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 MED13LQ71F56 2210 aa13.78□□□□□ -0.2
RABGGTA-201ENST00000216840 FCN1O00602 326 aa13.78□□□□□ -0.2
RABGGTA-201ENST00000216840 STAG3L2P0CL84 134 aa13.78□□□□□ -0.2
RABGGTA-201ENST00000216840 STAG3L3P0CL85 134 aa13.78□□□□□ -0.2
RABGGTA-201ENST00000216840 AREGP15514 252 aa13.78□□□□□ -0.2
RABGGTA-201ENST00000216840 PVRIGQ6DKI7 326 aa13.78□□□□□ -0.2
RABGGTA-201ENST00000216840 DYNAPQ8N1N2 210 aa13.78□□□□□ -0.2
RABGGTA-201ENST00000216840 ZNF843Q8N446 348 aa13.78□□□□□ -0.2
RABGGTA-201ENST00000216840 ZNF114Q8NC26 417 aa13.78□□□□□ -0.2
RABGGTA-201ENST00000216840 ABHD5Q8WTS1 349 aa13.78□□□□□ -0.2
RABGGTA-201ENST00000216840 ZFYVE26Q68DK2 2539 aa13.77□□□□□ -0.2
RABGGTA-201ENST00000216840 TEX22C9J3V5 150 aa13.77□□□□□ -0.21
RABGGTA-201ENST00000216840 SSX2Q16385 188 aa13.77□□□□□ -0.21
RABGGTA-201ENST00000216840 NIPSNAP3BQ9BS92 247 aa13.77□□□□□ -0.21
RABGGTA-201ENST00000216840 PAGE4O60829 102 aa13.76□□□□□ -0.21
RABGGTA-201ENST00000216840 MOSP00540 346 aa13.76□□□□□ -0.21
RABGGTA-201ENST00000216840 ATF4P18848 351 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-201ENST00000216840 MFAP2P55001 183 aa13.76□□□□□ -0.21
RABGGTA-201ENST00000216840 RHOBP62745 196 aa13.76□□□□□ -0.21
RABGGTA-201ENST00000216840 MMDQ15546 238 aa13.76□□□□□ -0.21
RABGGTA-201ENST00000216840 MINOS1Q5TGZ0 78 aa13.76□□□□□ -0.21
RABGGTA-201ENST00000216840 SPATA31B1PQ5VZV4 182 aa13.76□□□□□ -0.21
RABGGTA-201ENST00000216840 TVP23CQ96ET8 276 aa13.76□□□□□ -0.21
RABGGTA-201ENST00000216840 ACY3Q96HD9 319 aa13.76□□□□□ -0.21
RABGGTA-201ENST00000216840 TBX15Q96SF7 602 aa13.76□□□□□ -0.21
RABGGTA-201ENST00000216840 SEPSECSQ9HD40 501 aaKnown RBP13.76□□□□□ -0.21
RABGGTA-201ENST00000216840 MINOS1-NBL1R4GNA1 71 aa13.76□□□□□ -0.21
RABGGTA-201ENST00000216840 OOSP1A8MZH6 123 aa13.76□□□□□ -0.21
RABGGTA-201ENST00000216840 NBR2O15453 112 aa13.76□□□□□ -0.21
RABGGTA-201ENST00000216840 TOX4O94842 621 aa13.76□□□□□ -0.21
RABGGTA-201ENST00000216840 ARL14EPLP0DKL9 152 aa13.76□□□□□ -0.21
RABGGTA-201ENST00000216840 APELAP0DMC3 54 aa13.76□□□□□ -0.21
RABGGTA-201ENST00000216840 CD24P25063 80 aa13.76□□□□□ -0.21
RABGGTA-201ENST00000216840 PLGLAQ15195 96 aa13.76□□□□□ -0.21
RABGGTA-201ENST00000216840 FBLN7Q53RD9 439 aa13.76□□□□□ -0.21
RABGGTA-201ENST00000216840 NPBQ8NG41 125 aa13.76□□□□□ -0.21
RABGGTA-201ENST00000216840 C17orf50Q8WW18 174 aa13.76□□□□□ -0.21
RABGGTA-201ENST00000216840 EAF1Q96JC9 268 aaPredicted RBP13.76□□□□□ -0.21
RABGGTA-201ENST00000216840 NDUFS6O75380 124 aaKnown RBP13.75□□□□□ -0.21
RABGGTA-201ENST00000216840 FOXH1O75593 365 aa13.75□□□□□ -0.21
RABGGTA-201ENST00000216840 CXorf1O96002 111 aa13.75□□□□□ -0.21
RABGGTA-201ENST00000216840 GATA2P23769 480 aaPredicted RBP13.75□□□□□ -0.21
RABGGTA-201ENST00000216840 CCDC144NLQ6NUI1 221 aa13.75□□□□□ -0.21
RABGGTA-201ENST00000216840 C19orf35Q6ZS72 473 aa13.75□□□□□ -0.21
RABGGTA-201ENST00000216840 SRSF12Q8WXF0 261 aaKnown RBP13.75□□□□□ -0.21
RABGGTA-201ENST00000216840 NDUFA3O95167 84 aa13.75□□□□□ -0.21
RABGGTA-201ENST00000216840 LGALS4P56470 323 aa13.75□□□□□ -0.21
RABGGTA-201ENST00000216840 SPNS3Q6ZMD2 512 aa13.75□□□□□ -0.21
RABGGTA-201ENST00000216840 OR4F5Q8NH21 305 aa13.75□□□□□ -0.21
RABGGTA-201ENST00000216840 OR4F4Q96R69 305 aa13.75□□□□□ -0.21
RABGGTA-201ENST00000216840 MRPL36Q9P0J6 103 aaKnown RBP13.75□□□□□ -0.21
RABGGTA-201ENST00000216840 LOC105371267A0A1B0GV96 52 aa13.74□□□□□ -0.21
RABGGTA-201ENST00000216840 COLCA2A8K830 154 aa13.74□□□□□ -0.21
RABGGTA-201ENST00000216840 TMEM250H0YL14 139 aa13.74□□□□□ -0.21
RABGGTA-201ENST00000216840 IGHV3-48P01763 117 aa13.74□□□□□ -0.21
RABGGTA-201ENST00000216840 OR1P1Q8NH06 330 aa13.74□□□□□ -0.21
RABGGTA-201ENST00000216840 FAM168AQ92567 244 aa13.74□□□□□ -0.21
RABGGTA-201ENST00000216840 NPIPB3Q92617 1050 aa13.74□□□□□ -0.21
RABGGTA-201ENST00000216840 CRYGCP07315 174 aa13.73□□□□□ -0.21
RABGGTA-201ENST00000216840 UBE2E1P51965 193 aa13.73□□□□□ -0.21
RABGGTA-201ENST00000216840 HES1Q14469 280 aa13.73□□□□□ -0.21
RABGGTA-201ENST00000216840 CYP2G1PQ6ZSU1 146 aa13.73□□□□□ -0.21
RABGGTA-201ENST00000216840 THAP8Q8NA92 274 aa13.73□□□□□ -0.21
RABGGTA-201ENST00000216840 OR2T10Q8NGZ9 312 aa13.73□□□□□ -0.21
RABGGTA-201ENST00000216840 MISP3Q96FF7 219 aa13.73□□□□□ -0.21
RABGGTA-201ENST00000216840 PIMREGQ9BSJ6 248 aa13.73□□□□□ -0.21
RABGGTA-201ENST00000216840 TUBA4BQ9H853 241 aa13.73□□□□□ -0.21
RABGGTA-201ENST00000216840 POLR3KQ9Y2Y1 108 aaPredicted RBP13.73□□□□□ -0.21
RABGGTA-201ENST00000216840 MYO18BQ8IUG5 2567 aa13.73□□□□□ -0.21
RABGGTA-201ENST00000216840 IGKV1D-37A0A075B6S9 117 aa13.73□□□□□ -0.21
RABGGTA-201ENST00000216840 FAM78BQ5VT40 261 aa13.73□□□□□ -0.21
RABGGTA-201ENST00000216840 MIR17HGQ75NE6 70 aa13.73□□□□□ -0.21
RABGGTA-201ENST00000216840 C10orf105Q8TEF2 133 aa13.73□□□□□ -0.21
RABGGTA-201ENST00000216840 FUT9Q9Y231 359 aa13.73□□□□□ -0.21
RABGGTA-201ENST00000216840 TBL2Q9Y4P3 447 aaKnown RBP13.73□□□□□ -0.21
RABGGTA-201ENST00000216840 F11RQ9Y624 299 aaKnown RBP13.73□□□□□ -0.21
RABGGTA-201ENST00000216840 ZNF462Q96JM2 2506 aa13.72□□□□□ -0.21
RABGGTA-201ENST00000216840 C11orf94C9JXX5 98 aa13.72□□□□□ -0.21
RABGGTA-201ENST00000216840 UBE2G2P60604 165 aa13.72□□□□□ -0.21
RABGGTA-201ENST00000216840 RUSC1-AS1Q66K80 236 aa13.72□□□□□ -0.21
RABGGTA-201ENST00000216840 ETFRF1Q6IPR1 90 aa13.72□□□□□ -0.21
RABGGTA-201ENST00000216840 C15orf54Q8N8G6 183 aa13.72□□□□□ -0.21
RABGGTA-201ENST00000216840 AJUBAQ96IF1 538 aa13.72□□□□□ -0.21
RABGGTA-201ENST00000216840 SRSF8Q9BRL6 282 aaKnown RBP13.72□□□□□ -0.21
RABGGTA-201ENST00000216840 ABCA2Q9BZC7 2435 aa13.72□□□□□ -0.21
RABGGTA-201ENST00000216840 ZNF727A8MUV8 499 aa13.71□□□□□ -0.21
RABGGTA-201ENST00000216840 VWC2LB2RUY7 222 aa13.71□□□□□ -0.21
RABGGTA-201ENST00000216840 CNIH1O95406 144 aa13.71□□□□□ -0.21
RABGGTA-201ENST00000216840 GCHFRP30047 84 aa13.71□□□□□ -0.21
RABGGTA-201ENST00000216840 RND2P52198 227 aa13.71□□□□□ -0.21
RABGGTA-201ENST00000216840 EBI3Q14213 229 aa13.71□□□□□ -0.21
RABGGTA-201ENST00000216840 Q8N6K4 173 aa13.71□□□□□ -0.21
RABGGTA-201ENST00000216840 NANPQ8TBE9 248 aa13.71□□□□□ -0.21
RABGGTA-201ENST00000216840 SLC25A33Q9BSK2 321 aa13.71□□□□□ -0.21
RABGGTA-201ENST00000216840 LPAR2Q9HBW0 351 aa13.71□□□□□ -0.21
RABGGTA-201ENST00000216840 SDF2L1Q9HCN8 221 aa13.71□□□□□ -0.21
RABGGTA-201ENST00000216840 DMRT1Q9Y5R6 373 aa13.71□□□□□ -0.21
RABGGTA-201ENST00000216840 COL12A1Q99715 3063 aa13.71□□□□□ -0.21
RABGGTA-201ENST00000216840 IGHV4-61A0A0C4DH41 118 aa13.71□□□□□ -0.21
RABGGTA-201ENST00000216840 TCRBV4S1A1TA0A5B7 111 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms