RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 WASHC3Q9Y3C0 194 aa13.79□□□□□ -0.2
CTDP1-201ENST00000075430 CORTO00230 105 aa13.79□□□□□ -0.2
CTDP1-201ENST00000075430 ZNF324O75467 553 aaPredicted RBP13.79□□□□□ -0.2
CTDP1-201ENST00000075430 COMPP49747 757 aaPredicted RBP13.79□□□□□ -0.2
CTDP1-201ENST00000075430 SMIM21Q3B7S5 101 aa13.79□□□□□ -0.2
CTDP1-201ENST00000075430 ZFP30Q9Y2G7 519 aa13.79□□□□□ -0.2
CTDP1-201ENST00000075430 IGKV3D-15A0A087WSY6 115 aa13.78□□□□□ -0.2
CTDP1-201ENST00000075430 OR5B3Q8NH48 314 aa13.78□□□□□ -0.2
CTDP1-201ENST00000075430 J3QR06 171 aa13.78□□□□□ -0.2
CTDP1-201ENST00000075430 OR4A47Q6IF82 309 aa13.78□□□□□ -0.2
CTDP1-201ENST00000075430 NAA38Q9BRA0 125 aaKnown RBP13.78□□□□□ -0.2
CTDP1-201ENST00000075430 ZPBPQ9BS86 351 aa13.78□□□□□ -0.2
CTDP1-201ENST00000075430 IGLC2P0DOY2 106 aa13.78□□□□□ -0.2
CTDP1-201ENST00000075430 IGLC3P0DOY3 106 aa13.78□□□□□ -0.2
CTDP1-201ENST00000075430 ORM2P19652 201 aa13.78□□□□□ -0.2
CTDP1-201ENST00000075430 TCF24Q7RTU0 167 aa13.78□□□□□ -0.2
CTDP1-201ENST00000075430 TSKUQ8WUA8 353 aa13.78□□□□□ -0.2
CTDP1-201ENST00000075430 IL19Q9UHD0 177 aa13.78□□□□□ -0.2
CTDP1-201ENST00000075430 hDV102S1A0JD36 115 aa13.77□□□□□ -0.2
CTDP1-201ENST00000075430 NDUFB8O95169 186 aa13.77□□□□□ -0.2
CTDP1-201ENST00000075430 CD99P14209 185 aa13.77□□□□□ -0.2
CTDP1-201ENST00000075430 RPL19P84098 196 aaKnown RBP13.77□□□□□ -0.2
CTDP1-201ENST00000075430 DEFB124Q8NES8 71 aa13.77□□□□□ -0.2
CTDP1-201ENST00000075430 GGTLC3B5MD39 225 aa13.77□□□□□ -0.21
CTDP1-201ENST00000075430 YPEL1O60688 119 aa13.77□□□□□ -0.21
CTDP1-201ENST00000075430 SP9P0CG40 484 aa13.77□□□□□ -0.21
CTDP1-201ENST00000075430 C10orf55Q5SWW7 151 aa13.77□□□□□ -0.21
CTDP1-201ENST00000075430 YPEL2Q96QA6 119 aa13.77□□□□□ -0.21
CTDP1-201ENST00000075430 SPRR3Q9UBC9 169 aa13.77□□□□□ -0.21
CTDP1-201ENST00000075430 SH3BGRL2Q9UJC5 107 aa13.77□□□□□ -0.21
CTDP1-201ENST00000075430 NPIPB11E5RHQ5 1161 aa13.77□□□□□ -0.21
CTDP1-201ENST00000075430 M0R296 226 aa13.77□□□□□ -0.21
CTDP1-201ENST00000075430 ZNF718Q3SXZ3 478 aa13.77□□□□□ -0.21
CTDP1-201ENST00000075430 MORN2Q502X0 79 aa13.77□□□□□ -0.21
CTDP1-201ENST00000075430 ZCCHC24Q8N2G6 241 aaKnown RBP13.77□□□□□ -0.21
CTDP1-201ENST00000075430 ZBTB34Q8NCN2 500 aa13.77□□□□□ -0.21
CTDP1-201ENST00000075430 ZNF596Q8TC21 504 aa13.77□□□□□ -0.21
CTDP1-201ENST00000075430 KCNS1Q96KK3 526 aa13.77□□□□□ -0.21
CTDP1-201ENST00000075430 OTOGLQ3ZCN5 2332 aa13.77□□□□□ -0.21
CTDP1-201ENST00000075430 CSMD1Q96PZ7 3565 aa13.76□□□□□ -0.21
CTDP1-201ENST00000075430 OR52E5Q8NH55 327 aa13.76□□□□□ -0.21
CTDP1-201ENST00000075430 OR51B2Q9Y5P1 312 aa13.76□□□□□ -0.21
CTDP1-201ENST00000075430 IGKV1-16P04430 117 aa13.76□□□□□ -0.21
CTDP1-201ENST00000075430 LEMD1Q68G75 181 aa13.76□□□□□ -0.21
CTDP1-201ENST00000075430 TMEM136Q6ZRR5 245 aa13.76□□□□□ -0.21
CTDP1-201ENST00000075430 LINC00173Q6ZV60 143 aa13.76□□□□□ -0.21
CTDP1-201ENST00000075430 SSX8Q7RTT4 187 aa13.76□□□□□ -0.21
CTDP1-201ENST00000075430 TCTEX1D1Q8N7M0 179 aa13.76□□□□□ -0.21
CTDP1-201ENST00000075430 BET1LQ9NYM9 111 aa13.76□□□□□ -0.21
CTDP1-201ENST00000075430 C11orf53Q8IXP5 236 aa13.76□□□□□ -0.21
CTDP1-201ENST00000075430 P0C879 139 aa13.75□□□□□ -0.21
CTDP1-201ENST00000075430 DEFB109BQ30KR1 87 aa13.75□□□□□ -0.21
CTDP1-201ENST00000075430 PARD6GQ9BYG4 376 aaPredicted RBP13.75□□□□□ -0.21
CTDP1-201ENST00000075430 CD59P13987 128 aa13.75□□□□□ -0.21
CTDP1-201ENST00000075430 C19orf35Q6ZS72 473 aa13.75□□□□□ -0.21
CTDP1-201ENST00000075430 TMEM178AQ8NBL3 297 aa13.75□□□□□ -0.21
CTDP1-201ENST00000075430 IGKV1OR2-108A0A075B7D4 117 aa13.74□□□□□ -0.21
CTDP1-201ENST00000075430 IGHV3-72A0A0B4J1Y9 119 aa13.74□□□□□ -0.21
CTDP1-201ENST00000075430 CA7P43166 264 aa13.74□□□□□ -0.21
CTDP1-201ENST00000075430 SSBP2P81877 361 aaPredicted RBP13.74□□□□□ -0.21
CTDP1-201ENST00000075430 MPV17L2Q567V2 206 aa13.74□□□□□ -0.21
CTDP1-201ENST00000075430 ASCL3Q9NQ33 180 aa13.74□□□□□ -0.21
CTDP1-201ENST00000075430 TDGF1P13385 188 aa13.74□□□□□ -0.21
CTDP1-201ENST00000075430 TSPOP30536 169 aa13.74□□□□□ -0.21
CTDP1-201ENST00000075430 RELQ04864 619 aaPredicted RBP13.74□□□□□ -0.21
CTDP1-201ENST00000075430 NIT1Q86X76 327 aa13.74□□□□□ -0.21
CTDP1-201ENST00000075430 C1orf159Q96HA4 380 aa13.74□□□□□ -0.21
CTDP1-201ENST00000075430 CXXC4Q9H2H0 198 aa13.74□□□□□ -0.21
CTDP1-201ENST00000075430 SLC45A2Q9UMX9 530 aa13.74□□□□□ -0.21
CTDP1-201ENST00000075430 SAA2-SAA4A0A096LPE2 208 aa13.74□□□□□ -0.21
CTDP1-201ENST00000075430 SAA2P0DJI9 122 aaPredicted RBP13.74□□□□□ -0.21
CTDP1-201ENST00000075430 VDAC2P45880 294 aaPredicted RBP13.74□□□□□ -0.21
CTDP1-201ENST00000075430 PEAR1Q5VY43 1037 aaPredicted RBP13.74□□□□□ -0.21
CTDP1-201ENST00000075430 MUC21A0A0G2JKD1 596 aa13.73□□□□□ -0.21
CTDP1-201ENST00000075430 MUC21A0A140T8X8 626 aa13.73□□□□□ -0.21
CTDP1-201ENST00000075430 NUDT3O95989 172 aa13.73□□□□□ -0.21
CTDP1-201ENST00000075430 SELENOTP62341 195 aa13.73□□□□□ -0.21
CTDP1-201ENST00000075430 MUC21Q5SSG8 566 aa13.73□□□□□ -0.21
CTDP1-201ENST00000075430 LOXL4Q96JB6 756 aa13.73□□□□□ -0.21
CTDP1-201ENST00000075430 ALKBH7Q9BT30 221 aaPredicted RBP13.73□□□□□ -0.21
CTDP1-201ENST00000075430 ZGRF1Q86YA3 2104 aa13.73□□□□□ -0.21
CTDP1-201ENST00000075430 APOA2P02652 100 aa13.73□□□□□ -0.21
CTDP1-201ENST00000075430 CECR9P0C854 216 aa13.73□□□□□ -0.21
CTDP1-201ENST00000075430 IGLL1P15814 213 aa13.73□□□□□ -0.21
CTDP1-201ENST00000075430 UQCRFS1P47985 274 aa13.73□□□□□ -0.21
CTDP1-201ENST00000075430 TRIP6Q15654 476 aaKnown RBP13.73□□□□□ -0.21
CTDP1-201ENST00000075430 KLHDC1Q8N7A1 406 aa13.73□□□□□ -0.21
CTDP1-201ENST00000075430 OR2V2Q96R30 315 aa13.73□□□□□ -0.21
CTDP1-201ENST00000075430 CCL13Q99616 98 aa13.73□□□□□ -0.21
CTDP1-201ENST00000075430 M0R1B8 84 aa13.73□□□□□ -0.21
CTDP1-201ENST00000075430 MMP23AO75900 390 aa13.73□□□□□ -0.21
CTDP1-201ENST00000075430 MOSP00540 346 aa13.73□□□□□ -0.21
CTDP1-201ENST00000075430 HSPE1P61604 102 aaKnown RBP13.73□□□□□ -0.21
CTDP1-201ENST00000075430 CX3CL1P78423 397 aa13.73□□□□□ -0.21
CTDP1-201ENST00000075430 ZNF738Q8NE65 137 aa13.73□□□□□ -0.21
CTDP1-201ENST00000075430 PGLYRP4Q96LB8 373 aa13.73□□□□□ -0.21
CTDP1-201ENST00000075430 CEP295Q9C0D2 2601 aa13.72□□□□□ -0.21
CTDP1-201ENST00000075430 C21orf140B9A014 251 aa13.72□□□□□ -0.21
CTDP1-201ENST00000075430 AMY1AP04745 511 aa13.72□□□□□ -0.21
CTDP1-201ENST00000075430 LINC00869P0C866 280 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms