RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Zfp959Q91VM8 539 aa13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 P2ry4Q9JJS7 361 aa13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Vax2Q9WTP9 292 aa13.49□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Olfr554E9Q546 317 aa13.48□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Cox7a2P48771 83 aa13.48□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Eml5Q8BQM8 1977 aa13.48□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Adam6aB2RSY5 754 aa13.48□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Gm6904E9PVF1 202 aa13.48□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Gnb4P29387 340 aa13.48□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Fgf8P37237 268 aa13.48□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Tex43Q9D9I1 141 aa13.48□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 SiglechB7ZMQ6 332 aa13.48□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Gm15292L7N231 93 aa13.48□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Mdga2P60755 949 aa13.48□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 BivmQ8CBX9 502 aa13.48□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Dda1Q9D9Z5 102 aa13.48□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Cfap46E9Q2C0 2641 aa13.48□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Cr2P19070 1025 aa13.48□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Trav6-2Q5R1I4 113 aa13.48□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Vgll4Q80V24 287 aa13.48□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Vmn1r233Q8R294 319 aa13.48□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Olfr186Q8VEX5 309 aa13.48□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Barx1Q9ER42 254 aa13.48□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 TinagQ9WUR0 475 aa13.48□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Ighv5-12A0A075B5Q4 117 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Olfr1329L7MTV4 313 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Icam2P35330 277 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 UcnP81615 122 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Dhrs2Q149L0 282 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Vax1Q2NKI2 338 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Pate2Q3UW31 111 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Tmprss13Q5U405 543 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Bst1Q64277 311 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Sp9Q64HY3 484 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 PnlipQ6P8U6 465 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Ppp1r1aQ9ERT9 171 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 MosP00536 390 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Trav8d-1Q5R1H8 112 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Tmem11Q8BK08 190 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Klf11Q8K1S5 502 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Fcrl1Q8R4Y0 343 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Olfr344Q8VFP9 309 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Olfr922Q8VG50 311 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Eva1aQ91WM6 156 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Lamtor1Q9CQ22 161 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Mrps30Q9D0G0 442 aaKnown RBP13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Lime1Q9EQR5 269 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Olfr178E9Q9T3 319 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Cd59bP58019 129 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Olfr1168Q7TR25 312 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Olfr1431Q8VF59 312 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Olfr559Q8VH14 318 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Ms4a6bQ99N09 244 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Rpl11Q9CXW4 178 aaKnown RBP13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Sgms2Q9D4B1 365 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Gm29049A0A087WSM5 227 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Gm21118J3QPK8 227 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Gm10666K7N6B8 321 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Gm20909Q5FWB5 227 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Gm20852Q5M8R5 227 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 PtafrQ62035 341 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Gm20917Q62457 227 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Gm20809Q62458 227 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Gm20865Q62460 227 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Znf511Q6P0X2 227 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Gm20738Q810R8 227 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Olfr266Q8VFC3 316 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Mrpl42Q9CPV3 142 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Gm20806Q9D9T3 227 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Unc119Q9Z2R6 240 aa13.47□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Igkv9-123A0A140T8N8 117 aa13.46□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Gm12666A2AMD0 254 aaKnown RBP13.46□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Rbm24D3Z4I3 236 aaKnown RBP13.46□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 D430019H16RikJ3QPM6 83 aa13.46□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Saa2P05367 122 aa13.46□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Gnb1P62874 340 aa13.46□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Wbp1P97764 304 aa13.46□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Cxxc4Q6NXI8 198 aa13.46□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Klf17Q8CFA7 341 aa13.46□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Olfr960Q8VET5 316 aa13.46□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Tceal8Q9CZY2 117 aa13.46□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Fbxo25Q9D2Y6 357 aa13.46□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Fbxl17Q9QZN1 701 aa13.46□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Gm20878L7N244 103 aa13.46□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Q3TEI4 1023 aa13.46□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Il12rb1Q60837 738 aa13.46□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Olfr93Q6UAH1 312 aa13.46□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Mtch2Q791V5 303 aa13.46□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Rhno1Q8K3A4 235 aa13.46□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Ca15Q99N23 324 aa13.46□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Gins3Q9CY94 216 aa13.46□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Lyrm7Q9DA03 104 aa13.46□□□□□ -0.25
Ccdc88b-201ENSMUST00000113440 Hmga2P52927 108 aa13.46□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Olfr354Q8VGJ8 317 aa13.46□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Ccdc198Q9CPZ1 294 aa13.46□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Ndufaf3Q9JKL4 185 aa13.46□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Hsd17b6Q9R092 317 aa13.46□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Psmb2Q9R1P3 201 aa13.46□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Ramp3Q9WUP1 147 aa13.46□□□□□ -0.26
Ccdc88b-201ENSMUST00000113440 Wdr81Q5ND34 1934 aa13.46□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 58.9 ms