RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 IGKV1-33P01594 117 aa7.8□□□□□ -1.16
PHGDH-215ENST00000641371 M6PRP20645 277 aa7.8□□□□□ -1.16
PHGDH-215ENST00000641371 RPL29P47914 159 aaKnown RBP7.8□□□□□ -1.16
PHGDH-215ENST00000641371 RUNX1Q01196 453 aa7.8□□□□□ -1.16
PHGDH-215ENST00000641371 AKR1C1Q04828 323 aa7.8□□□□□ -1.16
PHGDH-215ENST00000641371 CD69Q07108 199 aa7.8□□□□□ -1.16
PHGDH-215ENST00000641371 HES1Q14469 280 aa7.8□□□□□ -1.16
PHGDH-215ENST00000641371 SSX2Q16385 188 aa7.8□□□□□ -1.16
PHGDH-215ENST00000641371 TNXAQ16473 311 aa7.8□□□□□ -1.16
PHGDH-215ENST00000641371 C5orf64Q2M2E5 130 aa7.8□□□□□ -1.16
PHGDH-215ENST00000641371 TMEM249Q2WGJ8 235 aa7.8□□□□□ -1.16
PHGDH-215ENST00000641371 PVRIGQ6DKI7 326 aa7.8□□□□□ -1.16
PHGDH-215ENST00000641371 LINC01356Q8N9X3 169 aa7.8□□□□□ -1.16
PHGDH-215ENST00000641371 OR1P1Q8NH06 330 aa7.8□□□□□ -1.16
PHGDH-215ENST00000641371 EAF1Q96JC9 268 aaPredicted RBP7.8□□□□□ -1.16
PHGDH-215ENST00000641371 RSG1Q9BU20 258 aa7.8□□□□□ -1.16
PHGDH-215ENST00000641371 ACTR3CQ9C0K3 210 aaPredicted RBP7.8□□□□□ -1.16
PHGDH-215ENST00000641371 ARHGAP32A7KAX9 2087 aa7.8□□□□□ -1.16
PHGDH-215ENST00000641371 TENM4Q6N022 2769 aa7.8□□□□□ -1.16
PHGDH-215ENST00000641371 IGHV1-69DA0A0B4J2H0 117 aa7.79□□□□□ -1.16
PHGDH-215ENST00000641371 CTXND1A0A1B0GTU2 59 aa7.79□□□□□ -1.16
PHGDH-215ENST00000641371 CNIH1O95406 144 aa7.79□□□□□ -1.16
PHGDH-215ENST00000641371 MT-CO2P00403 227 aa7.79□□□□□ -1.16
PHGDH-215ENST00000641371 IGHV1-69P01742 117 aa7.79□□□□□ -1.16
PHGDH-215ENST00000641371 OR13C7P0DN81 318 aa7.79□□□□□ -1.16
PHGDH-215ENST00000641371 TMEM11P17152 192 aa7.79□□□□□ -1.16
PHGDH-215ENST00000641371 SAA4P35542 130 aa7.79□□□□□ -1.16
PHGDH-215ENST00000641371 SELENOTP62341 195 aa7.79□□□□□ -1.16
PHGDH-215ENST00000641371 TUSC1Q2TAM9 212 aa7.79□□□□□ -1.16
PHGDH-215ENST00000641371 FFAR4Q5NUL3 377 aa7.79□□□□□ -1.16
PHGDH-215ENST00000641371 TREML4Q6UXN2 200 aa7.79□□□□□ -1.16
PHGDH-215ENST00000641371 ZNF562Q6V9R5 426 aa7.79□□□□□ -1.16
PHGDH-215ENST00000641371 CCDC28AQ8IWP9 274 aa7.79□□□□□ -1.16
PHGDH-215ENST00000641371 Q8N6K4 173 aa7.79□□□□□ -1.16
PHGDH-215ENST00000641371 SRSF12Q8WXF0 261 aaKnown RBP7.79□□□□□ -1.16
PHGDH-215ENST00000641371 TMEM68Q96MH6 324 aa7.79□□□□□ -1.16
PHGDH-215ENST00000641371 RNF2Q99496 336 aa7.79□□□□□ -1.16
PHGDH-215ENST00000641371 P2RX4Q99571 388 aa7.79□□□□□ -1.16
PHGDH-215ENST00000641371 SLC39A9Q9NUM3 307 aa7.79□□□□□ -1.16
PHGDH-215ENST00000641371 LSM4Q9Y4Z0 139 aaKnown RBP7.79□□□□□ -1.16
PHGDH-215ENST00000641371 CENPVL3A0A0U1RRI6 287 aa7.78□□□□□ -1.16
PHGDH-215ENST00000641371 IGLC7A0M8Q6 106 aa7.78□□□□□ -1.16
PHGDH-215ENST00000641371 SCGB2A1O75556 95 aa7.78□□□□□ -1.16
PHGDH-215ENST00000641371 CD5P06127 495 aa7.78□□□□□ -1.16
PHGDH-215ENST00000641371 FABP1P07148 127 aa7.78□□□□□ -1.16
PHGDH-215ENST00000641371 RBMS3Q6XE24 437 aaKnown RBP7.78□□□□□ -1.16
PHGDH-215ENST00000641371 SLC16A13Q7RTY0 426 aa7.78□□□□□ -1.16
PHGDH-215ENST00000641371 C16orf82Q7Z2V1 217 aa7.78□□□□□ -1.16
PHGDH-215ENST00000641371 LHFPL4Q7Z7J7 247 aa7.78□□□□□ -1.16
PHGDH-215ENST00000641371 NANPQ8TBE9 248 aa7.78□□□□□ -1.16
PHGDH-215ENST00000641371 SUN5Q8TC36 379 aa7.78□□□□□ -1.16
PHGDH-215ENST00000641371 TMEM170AQ8WVE7 144 aa7.78□□□□□ -1.16
PHGDH-215ENST00000641371 NARS2Q96I59 477 aaKnown RBP7.78□□□□□ -1.16
PHGDH-215ENST00000641371 SEC11CQ9BY50 192 aa7.78□□□□□ -1.16
PHGDH-215ENST00000641371 MEGF9Q9H1U4 602 aa7.78□□□□□ -1.16
PHGDH-215ENST00000641371 FBXL15Q9H469 300 aa7.78□□□□□ -1.16
PHGDH-215ENST00000641371 TREM1Q9NP99 234 aa7.78□□□□□ -1.16
PHGDH-215ENST00000641371 RPRMQ9NS64 109 aa7.78□□□□□ -1.16
PHGDH-215ENST00000641371 PLA2G2EQ9NZK7 142 aa7.78□□□□□ -1.16
PHGDH-215ENST00000641371 F11RQ9Y624 299 aaKnown RBP7.78□□□□□ -1.16
PHGDH-215ENST00000641371 A0A1W2PPV4 95 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 TMEM218A2RU14 115 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 NPIPB5A8MRT5 1133 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 SEC14L6B5MCN3 397 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 M0QZK8 103 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 HLA-DRB1P01911 266 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 OPN1MWP04001 364 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 FBP1P09467 338 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 OPN1MW2P0DN77 364 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 OPN1MW3P0DN78 364 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 DLX1P56177 255 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 WT1-ASQ06250 92 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 GUK1Q16774 197 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 MRGPRG-AS1Q2M3A8 158 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 KHDC3LQ587J8 217 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 ARSJQ5FYB0 599 aaPredicted RBP7.77□□□□□ -1.17
PHGDH-215ENST00000641371 LDLRAD2Q5SZI1 272 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 OR10G4Q8NGN3 311 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 OR10G9Q8NGN4 311 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 OR10G7Q8NGN6 311 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 SFT2D1Q8WV19 159 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 RCC1LQ96I51 464 aaKnown RBP7.77□□□□□ -1.17
PHGDH-215ENST00000641371 RASL11BQ9BPW5 248 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 TXNDC17Q9BRA2 123 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 GGTLC1Q9BX51 225 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 MANBALQ9NQG1 85 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 THYN1Q9P016 225 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 PITPNC1Q9UKF7 332 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 COL12A1Q99715 3063 aa7.77□□□□□ -1.17
PHGDH-215ENST00000641371 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.77□□□□□ -1.178e-8■■□□□ 12.2
PHGDH-215ENST00000641371 SPG11Q96JI7 2443 aa7.76□□□□□ -1.17
PHGDH-215ENST00000641371 MAP1LC3B2A6NCE7 125 aa7.76□□□□□ -1.17
PHGDH-215ENST00000641371 CGB1A6NKQ9 187 aa7.76□□□□□ -1.17
PHGDH-215ENST00000641371 TEX22C9J3V5 150 aa7.76□□□□□ -1.17
PHGDH-215ENST00000641371 AGPAT2O15120 278 aa7.76□□□□□ -1.17
PHGDH-215ENST00000641371 HSPB1P04792 205 aaKnown RBP7.76□□□□□ -1.17
PHGDH-215ENST00000641371 CRYGCP07315 174 aa7.76□□□□□ -1.17
PHGDH-215ENST00000641371 HIST1H1BP16401 226 aaKnown RBP7.76□□□□□ -1.17
PHGDH-215ENST00000641371 CDC34P49427 236 aaPredicted RBP7.76□□□□□ -1.17
PHGDH-215ENST00000641371 PSMB3P49720 205 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms