RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 SLC35E1Q96K37 410 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 SRSF8Q9BRL6 282 aaKnown RBP4.48□□□□□ -1.69
NEK3-211ENST00000629912 SSBP3Q9BWW4 388 aaPredicted RBP4.48□□□□□ -1.69
NEK3-211ENST00000629912 HINT2Q9BX68 163 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 SDF2L1Q9HCN8 221 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 RPS10P5Q9NQ39 176 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 SIRT7Q9NRC8 400 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 TMEM242Q9NWH2 141 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 DPM3Q9P2X0 92 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 SIGLEC9Q9Y336 463 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 PXMP4Q9Y6I8 212 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 ZZEF1O43149 2961 aa4.48□□□□□ -1.69
NEK3-211ENST00000629912 ARHGAP32A7KAX9 2087 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 TPRP12270 2363 aaKnown RBP4.47□□□□□ -1.69
NEK3-211ENST00000629912 A0A1W2PPI3 338 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 CXorf65A6NEN9 183 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 ZFP92A6NM28 416 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 ODF3BA8MYP8 253 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 OOSP1A8MZH6 123 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 C19orf84I3L1E1 186 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 SLC25A17O43808 307 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 LY6HO94772 140 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 CXorf1O96002 111 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 MT-ND4LP03901 98 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 OPN1MWP04001 364 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 CRYGCP07315 174 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 OPN1MW2P0DN77 364 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 OPN1MW3P0DN78 364 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 ATF4P18848 351 aaPredicted RBP4.47□□□□□ -1.69
NEK3-211ENST00000629912 HTR1DP28221 377 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 CEACAM3P40198 252 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 B2MP61769 119 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 ARF6P62330 175 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 RHOBP62745 196 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 MEF2BQ02080 365 aaPredicted RBP4.47□□□□□ -1.69
NEK3-211ENST00000629912 WT1-ASQ06250 92 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 HNF4GQ14541 408 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 MIC13Q5XKP0 118 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 HCP5Q6MZN7 132 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 THAP8Q8NA92 274 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 NPBQ8NG41 125 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 NANPQ8TBE9 248 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 IGFBPL1Q8WX77 278 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 RPEQ96AT9 228 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 YPEL4Q96NS1 127 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 RNF2Q99496 336 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 NIPSNAP3BQ9BS92 247 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 TMPRSS5Q9H3S3 457 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 SLC25A22Q9H936 323 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 UBTD1Q9HAC8 227 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 ONECUT1Q9UBC0 465 aa4.47□□□□□ -1.69
NEK3-211ENST00000629912 PUS1Q9Y606 427 aaKnown RBP eCLIP4.47□□□□□ -1.69
NEK3-211ENST00000629912 PLXNB1O43157 2135 aa4.46□□□□□ -1.69
NEK3-211ENST00000629912 SMG1Q96Q15 3661 aaKnown RBP4.46□□□□□ -1.7
NEK3-211ENST00000629912 ITPR1Q14643 2758 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 IGLC7A0M8Q6 106 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 F6UZH7 168 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 PDE6DO43924 150 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 PAGE4O60829 102 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 CLN5O75503 358 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 IGHV2-5P01817 119 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 COX7A1P24310 79 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 OR10J1P30954 320 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 CDKN1AP38936 164 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 PLA2G5P39877 138 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 RPL27AP46776 148 aaKnown RBP4.46□□□□□ -1.7
NEK3-211ENST00000629912 LMO4P61968 165 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 SELENOTP62341 195 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 FLI1Q01543 452 aaPredicted RBP4.46□□□□□ -1.7
NEK3-211ENST00000629912 EBI3Q14213 229 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 SSX2Q16385 188 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 MLANAQ16655 118 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 TMEM241Q24JQ0 296 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 GCSAMLQ5JQS6 135 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 LDLRAD2Q5SZI1 272 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 MINOS1Q5TGZ0 78 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 ETFRF1Q6IPR1 90 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 PPP1R27Q86WC6 154 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 STPG3Q8N7X2 389 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 ABHD5Q8WTS1 349 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 CFHR4Q92496 578 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 HIST1H2BAQ96A08 127 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 FAM122AQ96E09 287 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 MALSU1Q96EH3 234 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 SPOCK3Q9BQ16 436 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 CTDSP1Q9GZU7 261 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 NAT8Q9UHE5 227 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 FUT9Q9Y231 359 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 PRELID1Q9Y255 219 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 POLR3KQ9Y2Y1 108 aaPredicted RBP4.46□□□□□ -1.7
NEK3-211ENST00000629912 MINOS1-NBL1R4GNA1 71 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 ARL2-SNX15V9GYD0 113 aa4.46□□□□□ -1.7
NEK3-211ENST00000629912 LRBAP50851 2863 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 PKD1L2Q7Z442 2459 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 IGKV1OR2-108A0A075B7D4 117 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 IGHV3-72A0A0B4J1Y9 119 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 PSMB11A5LHX3 300 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 ZNF727A8MUV8 499 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 TEX22C9J3V5 150 aa4.45□□□□□ -1.7
NEK3-211ENST00000629912 CORTO00230 105 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms