RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 GPX8Q8TED1 209 aa10.04□□□□□ -0.8
SNX1-214ENST00000625244 NDUFAF3Q9BU61 184 aa10.04□□□□□ -0.8
SNX1-214ENST00000625244 IGKV1D-8A0A087WSZ0 117 aa10.03□□□□□ -0.8
SNX1-214ENST00000625244 DEFB131BA0A096LNP1 70 aa10.03□□□□□ -0.8
SNX1-214ENST00000625244 IGHV3-35A0A0C4DH35 117 aa10.03□□□□□ -0.8
SNX1-214ENST00000625244 OR4C46A6NHA9 309 aa10.03□□□□□ -0.8
SNX1-214ENST00000625244 GABARAPH6UMI1 98 aa10.03□□□□□ -0.8
SNX1-214ENST00000625244 CA1P00915 261 aaPredicted RBP10.03□□□□□ -0.8
SNX1-214ENST00000625244 CD74P04233 296 aa10.03□□□□□ -0.8
SNX1-214ENST00000625244 TNFSF8P32971 234 aa10.03□□□□□ -0.8
SNX1-214ENST00000625244 CDK10Q15131 360 aa10.03□□□□□ -0.8
SNX1-214ENST00000625244 SPANXN2Q5MJ10 180 aa10.03□□□□□ -0.8
SNX1-214ENST00000625244 C10orf55Q5SWW7 151 aa10.03□□□□□ -0.8
SNX1-214ENST00000625244 H1FOOQ8IZA3 346 aaPredicted RBP10.03□□□□□ -0.8
SNX1-214ENST00000625244 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.03□□□□□ -0.8
SNX1-214ENST00000625244 OR2D2Q9H210 308 aa10.03□□□□□ -0.8
SNX1-214ENST00000625244 EHFQ9NZC4 300 aa10.03□□□□□ -0.8
SNX1-214ENST00000625244 OR2W1Q9Y3N9 320 aa10.03□□□□□ -0.8
SNX1-214ENST00000625244 HMX3A6NHT5 357 aa10.02□□□□□ -0.81
SNX1-214ENST00000625244 SLC22A5O76082 557 aa10.02□□□□□ -0.81
SNX1-214ENST00000625244 CLEC3BP05452 202 aa10.02□□□□□ -0.81
SNX1-214ENST00000625244 HERV-K104P61576 105 aa10.02□□□□□ -0.81
SNX1-214ENST00000625244 ZNF767PQ75MW2 155 aa10.02□□□□□ -0.81
SNX1-214ENST00000625244 UBE2DNLQ8IWF7 75 aa10.02□□□□□ -0.81
SNX1-214ENST00000625244 TEX45Q8NA69 505 aa10.02□□□□□ -0.81
SNX1-214ENST00000625244 FANCD2OSQ96PS1 177 aa10.02□□□□□ -0.81
SNX1-214ENST00000625244 SPIN2AQ99865 258 aa10.02□□□□□ -0.81
SNX1-214ENST00000625244 SPIN2BQ9BPZ2 258 aa10.02□□□□□ -0.81
SNX1-214ENST00000625244 UFC1Q9Y3C8 167 aa10.02□□□□□ -0.81
SNX1-214ENST00000625244 ELOA3CA0A087WX78 387 aaPredicted RBP10.01□□□□□ -0.81
SNX1-214ENST00000625244 CTDSPLO15194 276 aa10.01□□□□□ -0.81
SNX1-214ENST00000625244 PMP2P02689 132 aa10.01□□□□□ -0.81
SNX1-214ENST00000625244 NAT1P18440 290 aa10.01□□□□□ -0.81
SNX1-214ENST00000625244 NFYAP23511 347 aaPredicted RBP10.01□□□□□ -0.81
SNX1-214ENST00000625244 HLA-DMAP28067 261 aa10.01□□□□□ -0.81
SNX1-214ENST00000625244 FCGR2CP31995 323 aa10.01□□□□□ -0.81
SNX1-214ENST00000625244 ELLP55199 621 aaPredicted RBP10.01□□□□□ -0.81
SNX1-214ENST00000625244 UBE2KP61086 200 aa10.01□□□□□ -0.81
SNX1-214ENST00000625244 TSPAN5P62079 268 aa10.01□□□□□ -0.81
SNX1-214ENST00000625244 SSBP1Q04837 148 aaKnown RBP10.01□□□□□ -0.81
SNX1-214ENST00000625244 CBX3Q13185 183 aa10.01□□□□□ -0.81
SNX1-214ENST00000625244 LAMTOR1Q6IAA8 161 aa10.01□□□□□ -0.81
SNX1-214ENST00000625244 TMEM17Q86X19 198 aa10.01□□□□□ -0.81
SNX1-214ENST00000625244 OR52I2Q8NH67 350 aa10.01□□□□□ -0.81
SNX1-214ENST00000625244 BORCS5Q969J3 196 aa10.01□□□□□ -0.81
SNX1-214ENST00000625244 EEF1AKMT3Q96AZ1 226 aa10.01□□□□□ -0.81
SNX1-214ENST00000625244 ABHD1Q96SE0 405 aa10.01□□□□□ -0.81
SNX1-214ENST00000625244 ZNF430Q9H8G1 570 aaPredicted RBP10.01□□□□□ -0.81
SNX1-214ENST00000625244 TAS2R8Q9NYW2 309 aa10.01□□□□□ -0.81
SNX1-214ENST00000625244 ANAPC10Q9UM13 185 aa10.01□□□□□ -0.81
SNX1-214ENST00000625244 ZNF257Q9Y2Q1 563 aa10.01□□□□□ -0.81
SNX1-214ENST00000625244 AGRNO00468 2067 aa10□□□□□ -0.81
SNX1-214ENST00000625244 A6NHS1 94 aa10□□□□□ -0.81
SNX1-214ENST00000625244 J3QRK9 145 aa10□□□□□ -0.81
SNX1-214ENST00000625244 IFNA21P01568 189 aa10□□□□□ -0.81
SNX1-214ENST00000625244 IFNA17P01571 189 aa10□□□□□ -0.81
SNX1-214ENST00000625244 MYOD1P15172 320 aa10□□□□□ -0.81
SNX1-214ENST00000625244 TBPP20226 339 aa10□□□□□ -0.81
SNX1-214ENST00000625244 PTBP1P26599 531 aaKnown RBP eCLIP10□□□□□ -0.81
SNX1-214ENST00000625244 HRH1P35367 487 aa10□□□□□ -0.81
SNX1-214ENST00000625244 TAS2R19P59542 299 aa10□□□□□ -0.81
SNX1-214ENST00000625244 TAGLNQ01995 201 aaKnown RBP10□□□□□ -0.81
SNX1-214ENST00000625244 C12orf74Q32Q52 190 aa10□□□□□ -0.81
SNX1-214ENST00000625244 VMA21Q3ZAQ7 101 aa10□□□□□ -0.81
SNX1-214ENST00000625244 PYDC2Q56P42 97 aa10□□□□□ -0.81
SNX1-214ENST00000625244 RNASE10Q5GAN6 216 aaKnown RBP10□□□□□ -0.81
SNX1-214ENST00000625244 SLC25A42Q86VD7 318 aa10□□□□□ -0.81
SNX1-214ENST00000625244 OR6F1Q8NGZ6 308 aa10□□□□□ -0.81
SNX1-214ENST00000625244 SMIM4Q8WVI0 70 aa10□□□□□ -0.81
SNX1-214ENST00000625244 KLK11Q9UBX7 282 aa10□□□□□ -0.81
SNX1-214ENST00000625244 MTFP1Q9UDX5 166 aa10□□□□□ -0.81
SNX1-214ENST00000625244 CELA1Q9UNI1 258 aa10□□□□□ -0.81
SNX1-214ENST00000625244 BOLA1Q9Y3E2 137 aa10□□□□□ -0.81
SNX1-214ENST00000625244 MFSD2BA6NFX1 497 aa9.99□□□□□ -0.81
SNX1-214ENST00000625244 PPYP01298 95 aa9.99□□□□□ -0.81
SNX1-214ENST00000625244 CTSDP07339 412 aaPredicted RBP9.99□□□□□ -0.81
SNX1-214ENST00000625244 RPA2P15927 270 aa9.99□□□□□ -0.81
SNX1-214ENST00000625244 PSMB6P28072 239 aa9.99□□□□□ -0.81
SNX1-214ENST00000625244 S100GP29377 79 aa9.99□□□□□ -0.81
SNX1-214ENST00000625244 RFX2P48378 723 aa9.99□□□□□ -0.81
SNX1-214ENST00000625244 FXYD4P59646 89 aa9.99□□□□□ -0.81
SNX1-214ENST00000625244 CENPSQ8N2Z9 138 aa9.99□□□□□ -0.81
SNX1-214ENST00000625244 SECTM1Q8WVN6 248 aa9.99□□□□□ -0.81
SNX1-214ENST00000625244 GIMAP1Q8WWP7 306 aa9.99□□□□□ -0.81
SNX1-214ENST00000625244 C5orf30Q96GV9 206 aa9.99□□□□□ -0.81
SNX1-214ENST00000625244 ADTRPQ96IZ2 230 aa9.99□□□□□ -0.81
SNX1-214ENST00000625244 C15orf61A6NNL5 157 aa9.98□□□□□ -0.81
SNX1-214ENST00000625244 TEX22C9J3V5 150 aa9.98□□□□□ -0.81
SNX1-214ENST00000625244 ACTL6BO94805 426 aa9.98□□□□□ -0.81
SNX1-214ENST00000625244 INPP1P49441 399 aa9.98□□□□□ -0.81
SNX1-214ENST00000625244 AP3S2P59780 193 aa9.98□□□□□ -0.81
SNX1-214ENST00000625244 RTL8BQ17RB0 113 aa9.98□□□□□ -0.81
SNX1-214ENST00000625244 TMEM229BQ8NBD8 167 aa9.98□□□□□ -0.81
SNX1-214ENST00000625244 ZNF2Q9BSG1 426 aaPredicted RBP9.98□□□□□ -0.81
SNX1-214ENST00000625244 ZNF436Q9C0F3 470 aaPredicted RBP9.98□□□□□ -0.81
SNX1-214ENST00000625244 SDHAF2Q9NX18 166 aa9.98□□□□□ -0.81
SNX1-214ENST00000625244 NPIPB5A8MRT5 1133 aa9.97□□□□□ -0.81
SNX1-214ENST00000625244 GSTZ1O43708 216 aaPredicted RBP9.97□□□□□ -0.81
SNX1-214ENST00000625244 RAB3DO95716 219 aa9.97□□□□□ -0.81
SNX1-214ENST00000625244 GPR183P32249 361 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms