RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 PYYP10082 97 aa12.21□□□□□ -0.45
TNFRSF11A-206ENST00000617039 CD81P60033 236 aa12.21□□□□□ -0.45
TNFRSF11A-206ENST00000617039 ICAM4Q14773 271 aa12.21□□□□□ -0.45
TNFRSF11A-206ENST00000617039 PQLC2Q6ZP29 291 aa12.21□□□□□ -0.45
TNFRSF11A-206ENST00000617039 C15orf54Q8N8G6 183 aa12.21□□□□□ -0.45
TNFRSF11A-206ENST00000617039 OR8B3Q8NGG8 313 aa12.21□□□□□ -0.45
TNFRSF11A-206ENST00000617039 OR8B2Q96RD0 313 aa12.21□□□□□ -0.45
TNFRSF11A-206ENST00000617039 RYDENQ9NUL5 291 aaKnown RBP12.21□□□□□ -0.45
TNFRSF11A-206ENST00000617039 GAR1Q9NY12 217 aaKnown RBP12.21□□□□□ -0.45
TNFRSF11A-206ENST00000617039 JPT1Q9UK76 154 aa12.21□□□□□ -0.45
TNFRSF11A-206ENST00000617039 SERTM2A0A1B0GWG4 89 aa12.21□□□□□ -0.45
TNFRSF11A-206ENST00000617039 FCN1O00602 326 aa12.21□□□□□ -0.45
TNFRSF11A-206ENST00000617039 GPR6P46095 362 aaPredicted RBP12.21□□□□□ -0.45
TNFRSF11A-206ENST00000617039 TCF23Q7RTU1 214 aa12.21□□□□□ -0.45
TNFRSF11A-206ENST00000617039 ZNF383Q8NA42 475 aa12.21□□□□□ -0.45
TNFRSF11A-206ENST00000617039 TGOLN2O43493 480 aa12.21□□□□□ -0.46
TNFRSF11A-206ENST00000617039 CFPP27918 469 aa12.21□□□□□ -0.46
TNFRSF11A-206ENST00000617039 LRRC75BQ2VPJ9 315 aa12.21□□□□□ -0.46
TNFRSF11A-206ENST00000617039 TMEM200BQ69YZ2 307 aa12.21□□□□□ -0.46
TNFRSF11A-206ENST00000617039 SSX7Q7RTT5 188 aa12.21□□□□□ -0.46
TNFRSF11A-206ENST00000617039 LURAP1Q96LR2 239 aa12.21□□□□□ -0.46
TNFRSF11A-206ENST00000617039 GP6Q9HCN6 339 aa12.21□□□□□ -0.46
TNFRSF11A-206ENST00000617039 BTBD17A6NE02 478 aa12.2□□□□□ -0.46
TNFRSF11A-206ENST00000617039 ZNF98A6NK75 572 aa12.2□□□□□ -0.46
TNFRSF11A-206ENST00000617039 CNTFRP26992 372 aa12.2□□□□□ -0.46
TNFRSF11A-206ENST00000617039 KRTDAPP60985 99 aa12.2□□□□□ -0.46
TNFRSF11A-206ENST00000617039 HABP2Q14520 560 aaPredicted RBP12.2□□□□□ -0.46
TNFRSF11A-206ENST00000617039 Q8WTZ3 238 aa12.2□□□□□ -0.46
TNFRSF11A-206ENST00000617039 LSM10Q969L4 123 aaKnown RBP12.2□□□□□ -0.46
TNFRSF11A-206ENST00000617039 TOLLIPQ9H0E2 274 aa12.2□□□□□ -0.46
TNFRSF11A-206ENST00000617039 MBD3L4A6NDZ8 208 aaPredicted RBP12.2□□□□□ -0.46
TNFRSF11A-206ENST00000617039 MBD3L3A6NE82 208 aaPredicted RBP12.2□□□□□ -0.46
TNFRSF11A-206ENST00000617039 MBD3L5A6NJ08 208 aaPredicted RBP12.2□□□□□ -0.46
TNFRSF11A-206ENST00000617039 KHDC3LQ587J8 217 aa12.2□□□□□ -0.46
TNFRSF11A-206ENST00000617039 MBD3L2Q8NHZ7 208 aaPredicted RBP12.2□□□□□ -0.46
TNFRSF11A-206ENST00000617039 ZCCHC14Q8WYQ9 949 aaKnown RBP12.2□□□□□ -0.46
TNFRSF11A-206ENST00000617039 NABP2Q9BQ15 211 aa12.2□□□□□ -0.46
TNFRSF11A-206ENST00000617039 HIF1ANQ9NWT6 349 aa12.2□□□□□ -0.46
TNFRSF11A-206ENST00000617039 E7EQL1 145 aa12.2□□□□□ -0.46
TNFRSF11A-206ENST00000617039 IGKV1D-33P01593 117 aa12.2□□□□□ -0.46
TNFRSF11A-206ENST00000617039 IGKV1-33P01594 117 aa12.2□□□□□ -0.46
TNFRSF11A-206ENST00000617039 OR2T10Q8NGZ9 312 aa12.2□□□□□ -0.46
TNFRSF11A-206ENST00000617039 OR5B3Q8NH48 314 aa12.2□□□□□ -0.46
TNFRSF11A-206ENST00000617039 CLDND2Q8NHS1 167 aa12.2□□□□□ -0.46
TNFRSF11A-206ENST00000617039 PRRC2AP48634 2157 aaKnown RBP12.19□□□□□ -0.46
TNFRSF11A-206ENST00000617039 CXCL1P09341 107 aa12.19□□□□□ -0.46
TNFRSF11A-206ENST00000617039 PRRX1P54821 245 aa12.19□□□□□ -0.46
TNFRSF11A-206ENST00000617039 ZBTB34Q8NCN2 500 aa12.19□□□□□ -0.46
TNFRSF11A-206ENST00000617039 CHODLQ9H9P2 273 aa12.19□□□□□ -0.46
TNFRSF11A-206ENST00000617039 TECRQ9NZ01 308 aaKnown RBP12.19□□□□□ -0.46
TNFRSF11A-206ENST00000617039 MIOXQ9UGB7 285 aa12.19□□□□□ -0.46
TNFRSF11A-206ENST00000617039 RPL27AP46776 148 aaKnown RBP12.19□□□□□ -0.46
TNFRSF11A-206ENST00000617039 ZNF439Q8NDP4 499 aa12.19□□□□□ -0.46
TNFRSF11A-206ENST00000617039 LINC00479Q96M42 142 aa12.19□□□□□ -0.46
TNFRSF11A-206ENST00000617039 IFNL4K9M1U5 179 aa12.19□□□□□ -0.46
TNFRSF11A-206ENST00000617039 CLEC3BP05452 202 aa12.19□□□□□ -0.46
TNFRSF11A-206ENST00000617039 IL6RP08887 468 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF11A-206ENST00000617039 CT45A6P0DMU7 189 aa12.19□□□□□ -0.46
TNFRSF11A-206ENST00000617039 CT45A5P0DMU8 189 aa12.19□□□□□ -0.46
TNFRSF11A-206ENST00000617039 CT45A7P0DMV0 189 aa12.19□□□□□ -0.46
TNFRSF11A-206ENST00000617039 HOXB1P14653 301 aaPredicted RBP12.19□□□□□ -0.46
TNFRSF11A-206ENST00000617039 SERF2P84101 59 aa12.19□□□□□ -0.46
TNFRSF11A-206ENST00000617039 HELTA6NFD8 242 aa12.18□□□□□ -0.46
TNFRSF11A-206ENST00000617039 TAS2R45P59539 299 aa12.18□□□□□ -0.46
TNFRSF11A-206ENST00000617039 HAPLN4Q86UW8 402 aa12.18□□□□□ -0.46
TNFRSF11A-206ENST00000617039 OR8I2Q8N0Y5 310 aa12.18□□□□□ -0.46
TNFRSF11A-206ENST00000617039 NAT8Q9UHE5 227 aa12.18□□□□□ -0.46
TNFRSF11A-206ENST00000617039 PRNDQ9UKY0 176 aa12.18□□□□□ -0.46
TNFRSF11A-206ENST00000617039 APOBEC3AP31941 199 aaPredicted RBP12.18□□□□□ -0.46
TNFRSF11A-206ENST00000617039 C1orf162Q8NEQ5 155 aaPredicted RBP12.18□□□□□ -0.46
TNFRSF11A-206ENST00000617039 POM121Q96HA1 1249 aa12.18□□□□□ -0.46
TNFRSF11A-206ENST00000617039 TPSG1Q9NRR2 321 aa12.18□□□□□ -0.46
TNFRSF11A-206ENST00000617039 ZNF705AQ6ZN79 300 aaPredicted RBP12.18□□□□□ -0.46
TNFRSF11A-206ENST00000617039 OR2D3Q8NGH3 330 aa12.18□□□□□ -0.46
TNFRSF11A-206ENST00000617039 DUXBA0A1W2PPF3 345 aa12.17□□□□□ -0.46
TNFRSF11A-206ENST00000617039 AP4M1O00189 453 aa12.17□□□□□ -0.46
TNFRSF11A-206ENST00000617039 GNG7O60262 68 aa12.17□□□□□ -0.46
TNFRSF11A-206ENST00000617039 CBLN1P23435 193 aa12.17□□□□□ -0.46
TNFRSF11A-206ENST00000617039 MEOX2P50222 304 aa12.17□□□□□ -0.46
TNFRSF11A-206ENST00000617039 NUBP1P53384 320 aa12.17□□□□□ -0.46
TNFRSF11A-206ENST00000617039 GNG5P63218 68 aa12.17□□□□□ -0.46
TNFRSF11A-206ENST00000617039 RPL19P84098 196 aaKnown RBP12.17□□□□□ -0.46
TNFRSF11A-206ENST00000617039 LRTM2Q8N967 370 aa12.17□□□□□ -0.46
TNFRSF11A-206ENST00000617039 PERPQ96FX8 193 aa12.17□□□□□ -0.46
TNFRSF11A-206ENST00000617039 TRGC1P0CF51 173 aa12.17□□□□□ -0.46
TNFRSF11A-206ENST00000617039 UQCRFS1P47985 274 aa12.17□□□□□ -0.46
TNFRSF11A-206ENST00000617039 OR10G8Q8NGN5 311 aa12.17□□□□□ -0.46
TNFRSF11A-206ENST00000617039 DUX5Q96PT3 197 aa12.17□□□□□ -0.46
TNFRSF11A-206ENST00000617039 HCFC1P51610 2035 aa12.17□□□□□ -0.46
TNFRSF11A-206ENST00000617039 ERVK11-1P61568 191 aa12.17□□□□□ -0.46
TNFRSF11A-206ENST00000617039 ATP6V1FQ16864 119 aa12.17□□□□□ -0.46
TNFRSF11A-206ENST00000617039 ZNF331Q9NQX6 463 aaPredicted RBP12.17□□□□□ -0.46
TNFRSF11A-206ENST00000617039 PGPA6NDG6 321 aa12.16□□□□□ -0.46
TNFRSF11A-206ENST00000617039 CLN5O75503 358 aa12.16□□□□□ -0.46
TNFRSF11A-206ENST00000617039 C10orf113Q5VZT2 155 aa12.16□□□□□ -0.46
TNFRSF11A-206ENST00000617039 IL15RAQ13261 267 aa12.16□□□□□ -0.46
TNFRSF11A-206ENST00000617039 WFDC3Q8IUB2 231 aa12.16□□□□□ -0.46
TNFRSF11A-206ENST00000617039 GAFA1Q96PS6 74 aa12.16□□□□□ -0.46
TNFRSF11A-206ENST00000617039 RNASE7Q9H1E1 156 aaKnown RBP12.16□□□□□ -0.46
TNFRSF11A-206ENST00000617039 A0A1B0GUS0 222 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms