RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 OR9G9P0C7N8 305 aa12.24□□□□□ -0.45
VPS36-207ENST00000611132 RPL27AP46776 148 aaKnown RBP12.24□□□□□ -0.45
VPS36-207ENST00000611132 HCP5Q6MZN7 132 aa12.24□□□□□ -0.45
VPS36-207ENST00000611132 IGKV1-6A0A0C4DH72 117 aa12.24□□□□□ -0.45
VPS36-207ENST00000611132 A0A1B0GUS0 222 aa12.24□□□□□ -0.45
VPS36-207ENST00000611132 RPL30P62888 115 aaKnown RBP12.24□□□□□ -0.45
VPS36-207ENST00000611132 ZNRF1Q8ND25 227 aa12.24□□□□□ -0.45
VPS36-207ENST00000611132 SRSF12Q8WXF0 261 aaKnown RBP12.24□□□□□ -0.45
VPS36-207ENST00000611132 TIMD4Q96H15 378 aa12.24□□□□□ -0.45
VPS36-207ENST00000611132 GUCD1Q96NT3 240 aa12.24□□□□□ -0.45
VPS36-207ENST00000611132 GVINP1Q7Z2Y8 2422 aa12.24□□□□□ -0.45
VPS36-207ENST00000611132 ZNF106Q9H2Y7 1883 aaKnown RBP12.24□□□□□ -0.45
VPS36-207ENST00000611132 DOCK7Q96N67 2140 aa12.24□□□□□ -0.45
VPS36-207ENST00000611132 HIGD1CA8MV81 97 aa12.23□□□□□ -0.45
VPS36-207ENST00000611132 C9JCJ5 164 aa12.23□□□□□ -0.45
VPS36-207ENST00000611132 CIDEAO60543 219 aa12.23□□□□□ -0.45
VPS36-207ENST00000611132 IGHV3-48P01763 117 aa12.23□□□□□ -0.45
VPS36-207ENST00000611132 SCNM1Q9BWG6 230 aa12.23□□□□□ -0.45
VPS36-207ENST00000611132 KIAA1671Q9BY89 1806 aa12.23□□□□□ -0.45
VPS36-207ENST00000611132 RBFOX2O43251 390 aaKnown RBP eCLIP12.23□□□□□ -0.45
VPS36-207ENST00000611132 GNG7O60262 68 aa12.23□□□□□ -0.45
VPS36-207ENST00000611132 ORM1P02763 201 aa12.23□□□□□ -0.45
VPS36-207ENST00000611132 COX7A1P24310 79 aa12.23□□□□□ -0.45
VPS36-207ENST00000611132 CLDN18P56856 261 aa12.23□□□□□ -0.45
VPS36-207ENST00000611132 MAFAQ8NHW3 353 aaPredicted RBP12.23□□□□□ -0.45
VPS36-207ENST00000611132 MRPS18CQ9Y3D5 142 aaKnown RBP12.23□□□□□ -0.45
VPS36-207ENST00000611132 UNQ5815/PRO19632Q6UWF5 114 aa12.23□□□□□ -0.45
VPS36-207ENST00000611132 COL4A6Q14031 1691 aa12.23□□□□□ -0.45
VPS36-207ENST00000611132 A0A1W2PRE2 83 aa12.23□□□□□ -0.45
VPS36-207ENST00000611132 FOXI3A8MTJ6 420 aaPredicted RBP12.23□□□□□ -0.45
VPS36-207ENST00000611132 S100A4P26447 101 aaKnown RBP12.23□□□□□ -0.45
VPS36-207ENST00000611132 PNKDQ8N490 385 aa12.23□□□□□ -0.45
VPS36-207ENST00000611132 GPX1P07203 203 aa12.22□□□□□ -0.45
VPS36-207ENST00000611132 RPL11P62913 178 aaKnown RBP12.22□□□□□ -0.45
VPS36-207ENST00000611132 H3BTX0 84 aa12.22□□□□□ -0.45
VPS36-207ENST00000611132 C20orf204Q6ZNR8 217 aa12.22□□□□□ -0.45
VPS36-207ENST00000611132 GGNQ86UU5 652 aa12.22□□□□□ -0.45
VPS36-207ENST00000611132 THYN1Q9P016 225 aa12.22□□□□□ -0.45
VPS36-207ENST00000611132 INSIG2Q9Y5U4 225 aa12.22□□□□□ -0.45
VPS36-207ENST00000611132 SCGB1C2P0DMR2 95 aa12.22□□□□□ -0.45
VPS36-207ENST00000611132 GCSHP23434 173 aa12.22□□□□□ -0.45
VPS36-207ENST00000611132 DUTP33316 252 aaKnown RBP12.22□□□□□ -0.45
VPS36-207ENST00000611132 ZNF585BQ52M93 769 aa12.22□□□□□ -0.45
VPS36-207ENST00000611132 LDLRAD2Q5SZI1 272 aa12.22□□□□□ -0.45
VPS36-207ENST00000611132 SSBP4Q9BWG4 385 aaPredicted RBP12.22□□□□□ -0.45
VPS36-207ENST00000611132 C3orf79P0CE67 100 aa12.22□□□□□ -0.45
VPS36-207ENST00000611132 LINC00305Q7Z4B0 112 aa12.22□□□□□ -0.45
VPS36-207ENST00000611132 ZNF714Q96N38 554 aa12.22□□□□□ -0.45
VPS36-207ENST00000611132 FOXG1P55316 489 aaPredicted RBP12.21□□□□□ -0.45
VPS36-207ENST00000611132 CDX2Q99626 313 aaPredicted RBP12.21□□□□□ -0.45
VPS36-207ENST00000611132 SOX21Q9Y651 276 aaPredicted RBP12.21□□□□□ -0.45
VPS36-207ENST00000611132 TMEM189A5PLL7 270 aa12.21□□□□□ -0.45
VPS36-207ENST00000611132 OR2T8A6NH00 312 aa12.21□□□□□ -0.45
VPS36-207ENST00000611132 IQCF6A8MYZ5 107 aa12.21□□□□□ -0.45
VPS36-207ENST00000611132 LILRA1O75019 489 aa12.21□□□□□ -0.45
VPS36-207ENST00000611132 NBEAP1P0C6P0 100 aa12.21□□□□□ -0.45
VPS36-207ENST00000611132 CKS2P33552 79 aa12.21□□□□□ -0.45
VPS36-207ENST00000611132 LYRM7Q5U5X0 104 aa12.21□□□□□ -0.45
VPS36-207ENST00000611132 MUC15Q8N387 334 aa12.21□□□□□ -0.45
VPS36-207ENST00000611132 C15orf61A6NNL5 157 aa12.21□□□□□ -0.46
VPS36-207ENST00000611132 NPIPB11E5RHQ5 1161 aa12.21□□□□□ -0.46
VPS36-207ENST00000611132 MC5RP33032 325 aa12.21□□□□□ -0.46
VPS36-207ENST00000611132 HS3ST6Q96QI5 342 aa12.21□□□□□ -0.46
VPS36-207ENST00000611132 SLC25A33Q9BSK2 321 aa12.21□□□□□ -0.46
VPS36-207ENST00000611132 FAM90A9PA6NNJ1 464 aa12.2□□□□□ -0.46
VPS36-207ENST00000611132 SLC25A17O43808 307 aa12.2□□□□□ -0.46
VPS36-207ENST00000611132 NPSP0C0P6 89 aa12.2□□□□□ -0.46
VPS36-207ENST00000611132 RSPO1Q2MKA7 263 aaPredicted RBP12.2□□□□□ -0.46
VPS36-207ENST00000611132 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.2□□□□□ -0.46
VPS36-207ENST00000611132 DIRC2Q96SL1 478 aa12.2□□□□□ -0.46
VPS36-207ENST00000611132 LY96Q9Y6Y9 160 aa12.2□□□□□ -0.46
VPS36-207ENST00000611132 A1L4Q6 167 aa12.2□□□□□ -0.46
VPS36-207ENST00000611132 NCBP2LA6PVI3 153 aaKnown RBP12.2□□□□□ -0.46
VPS36-207ENST00000611132 SNAI2O43623 268 aa12.2□□□□□ -0.46
VPS36-207ENST00000611132 CA1P00915 261 aaPredicted RBP12.2□□□□□ -0.46
VPS36-207ENST00000611132 CACNG8Q8WXS5 425 aa12.2□□□□□ -0.46
VPS36-207ENST00000611132 RPP21Q9H633 154 aaKnown RBP12.2□□□□□ -0.46
VPS36-207ENST00000611132 IGLV3-1P01715 115 aa12.2□□□□□ -0.46
VPS36-207ENST00000611132 HOXA4Q00056 320 aaPredicted RBP12.2□□□□□ -0.46
VPS36-207ENST00000611132 OR52E5Q8NH55 327 aa12.2□□□□□ -0.46
VPS36-207ENST00000611132 GP6Q9HCN6 339 aa12.2□□□□□ -0.46
VPS36-207ENST00000611132 SEPSECSQ9HD40 501 aaKnown RBP12.2□□□□□ -0.46
VPS36-207ENST00000611132 UFC1Q9Y3C8 167 aa12.2□□□□□ -0.46
VPS36-207ENST00000611132 CELA3BP08861 270 aa12.2□□□□□ -0.46
VPS36-207ENST00000611132 LHX2P50458 406 aa12.2□□□□□ -0.46
VPS36-207ENST00000611132 FOXF2Q12947 444 aa12.2□□□□□ -0.46
VPS36-207ENST00000611132 SPATA31B1PQ5VZV4 182 aa12.2□□□□□ -0.46
VPS36-207ENST00000611132 OR4C13Q8NGP0 309 aa12.2□□□□□ -0.46
VPS36-207ENST00000611132 IGKV3D-15A0A087WSY6 115 aa12.19□□□□□ -0.46
VPS36-207ENST00000611132 YPEL1O60688 119 aa12.19□□□□□ -0.46
VPS36-207ENST00000611132 CCL8P80075 99 aa12.19□□□□□ -0.46
VPS36-207ENST00000611132 COA6Q5JTJ3 125 aaKnown RBP12.19□□□□□ -0.46
VPS36-207ENST00000611132 GOLT1AQ6ZVE7 132 aa12.19□□□□□ -0.46
VPS36-207ENST00000611132 ORAOV1Q8WV07 137 aa12.19□□□□□ -0.46
VPS36-207ENST00000611132 GPR82Q96P67 336 aa12.19□□□□□ -0.46
VPS36-207ENST00000611132 YPEL2Q96QA6 119 aa12.19□□□□□ -0.46
VPS36-207ENST00000611132 MGST2Q99735 147 aa12.19□□□□□ -0.46
VPS36-207ENST00000611132 SELLP14151 372 aa12.19□□□□□ -0.46
VPS36-207ENST00000611132 CX3CL1P78423 397 aa12.19□□□□□ -0.46
VPS36-207ENST00000611132 UBE2V1Q13404 147 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms