RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 BSXQ3C1V8 233 aa11.02□□□□□ -0.65
NEK3-205ENST00000610828 C10orf55Q5SWW7 151 aa11.02□□□□□ -0.65
NEK3-205ENST00000610828 MALSU1Q96EH3 234 aa11.02□□□□□ -0.65
NEK3-205ENST00000610828 RITA1Q96K30 269 aa11.02□□□□□ -0.65
NEK3-205ENST00000610828 ZNF430Q9H8G1 570 aaPredicted RBP11.02□□□□□ -0.65
NEK3-205ENST00000610828 SEPSECSQ9HD40 501 aaKnown RBP11.02□□□□□ -0.65
NEK3-205ENST00000610828 HRNRQ86YZ3 2850 aaPredicted RBP11.02□□□□□ -0.65
NEK3-205ENST00000610828 ZNF98A6NK75 572 aa11.02□□□□□ -0.65
NEK3-205ENST00000610828 CXorf1O96002 111 aa11.02□□□□□ -0.65
NEK3-205ENST00000610828 CXCL1P09341 107 aa11.02□□□□□ -0.65
NEK3-205ENST00000610828 ATP5G3P48201 142 aa11.02□□□□□ -0.65
NEK3-205ENST00000610828 ATP5IP56385 69 aaPredicted RBP11.02□□□□□ -0.65
NEK3-205ENST00000610828 MLANAQ16655 118 aa11.02□□□□□ -0.65
NEK3-205ENST00000610828 TMEM249Q2WGJ8 235 aa11.02□□□□□ -0.65
NEK3-205ENST00000610828 OR4A5Q8NH83 315 aa11.02□□□□□ -0.65
NEK3-205ENST00000610828 C12orf57Q99622 126 aa11.02□□□□□ -0.65
NEK3-205ENST00000610828 TGIF2-C20orf24A0A0A6YYL0 155 aa11.01□□□□□ -0.65
NEK3-205ENST00000610828 FSTL3O95633 263 aa11.01□□□□□ -0.65
NEK3-205ENST00000610828 PRRX1P54821 245 aa11.01□□□□□ -0.65
NEK3-205ENST00000610828 RHOBP62745 196 aa11.01□□□□□ -0.65
NEK3-205ENST00000610828 KIAA0141Q14154 515 aaPredicted RBP11.01□□□□□ -0.65
NEK3-205ENST00000610828 GAMTQ14353 236 aa11.01□□□□□ -0.65
NEK3-205ENST00000610828 HLA-DRB5Q30154 266 aa11.01□□□□□ -0.65
NEK3-205ENST00000610828 VMA21Q3ZAQ7 101 aa11.01□□□□□ -0.65
NEK3-205ENST00000610828 TMEM144Q7Z5S9 345 aa11.01□□□□□ -0.65
NEK3-205ENST00000610828 OR8B3Q8NGG8 313 aa11.01□□□□□ -0.65
NEK3-205ENST00000610828 OR51G1Q8NGK1 321 aa11.01□□□□□ -0.65
NEK3-205ENST00000610828 TNFRSF14Q92956 283 aa11.01□□□□□ -0.65
NEK3-205ENST00000610828 OR8B2Q96RD0 313 aa11.01□□□□□ -0.65
NEK3-205ENST00000610828 TPSG1Q9NRR2 321 aa11.01□□□□□ -0.65
NEK3-205ENST00000610828 CBLN4Q9NTU7 201 aa11.01□□□□□ -0.65
NEK3-205ENST00000610828 TMEM242Q9NWH2 141 aa11.01□□□□□ -0.65
NEK3-205ENST00000610828 IGKV1OR2-108A0A075B7D4 117 aa11.01□□□□□ -0.65
NEK3-205ENST00000610828 CLDN34H7C241 214 aa11.01□□□□□ -0.65
NEK3-205ENST00000610828 IGLV1-47P01700 117 aa11.01□□□□□ -0.65
NEK3-205ENST00000610828 COX7A1P24310 79 aa11.01□□□□□ -0.65
NEK3-205ENST00000610828 PRR20EP86478 221 aa11.01□□□□□ -0.65
NEK3-205ENST00000610828 PRR20CP86479 221 aa11.01□□□□□ -0.65
NEK3-205ENST00000610828 PRR20DP86480 221 aa11.01□□□□□ -0.65
NEK3-205ENST00000610828 PRR20BP86481 221 aa11.01□□□□□ -0.65
NEK3-205ENST00000610828 PRR20AP86496 221 aa11.01□□□□□ -0.65
NEK3-205ENST00000610828 SPATA31B1PQ5VZV4 182 aa11.01□□□□□ -0.65
NEK3-205ENST00000610828 CLEC7AQ9BXN2 247 aa11.01□□□□□ -0.65
NEK3-205ENST00000610828 ITPR1Q14643 2758 aa11□□□□□ -0.65
NEK3-205ENST00000610828 A0A1W2PN81 502 aa11□□□□□ -0.65
NEK3-205ENST00000610828 ACTL6BO94805 426 aa11□□□□□ -0.65
NEK3-205ENST00000610828 SOD3P08294 240 aa11□□□□□ -0.65
NEK3-205ENST00000610828 CHRNA7P36544 502 aa11□□□□□ -0.65
NEK3-205ENST00000610828 RPL23P62829 140 aaKnown RBP11□□□□□ -0.65
NEK3-205ENST00000610828 WT1-ASQ06250 92 aa11□□□□□ -0.65
NEK3-205ENST00000610828 CD69Q07108 199 aa11□□□□□ -0.65
NEK3-205ENST00000610828 SSX3Q99909 188 aa11□□□□□ -0.65
NEK3-205ENST00000610828 DLL1O00548 723 aa10.99□□□□□ -0.65
NEK3-205ENST00000610828 PDE6DO43924 150 aa10.99□□□□□ -0.65
NEK3-205ENST00000610828 GATA2P23769 480 aaPredicted RBP10.99□□□□□ -0.65
NEK3-205ENST00000610828 FAM78BQ5VT40 261 aa10.99□□□□□ -0.65
NEK3-205ENST00000610828 NANPQ8TBE9 248 aa10.99□□□□□ -0.65
NEK3-205ENST00000610828 ONECUT1Q9UBC0 465 aa10.99□□□□□ -0.65
NEK3-205ENST00000610828 MIOXQ9UGB7 285 aa10.99□□□□□ -0.65
NEK3-205ENST00000610828 SLC45A2Q9UMX9 530 aa10.99□□□□□ -0.65
NEK3-205ENST00000610828 INSIG2Q9Y5U4 225 aa10.99□□□□□ -0.65
NEK3-205ENST00000610828 C5orf52A6NGY3 159 aa10.99□□□□□ -0.65
NEK3-205ENST00000610828 CGB1A6NKQ9 187 aa10.99□□□□□ -0.65
NEK3-205ENST00000610828 BUB1B-PAK6H3BSN5 160 aa10.99□□□□□ -0.65
NEK3-205ENST00000610828 NDUFS6O75380 124 aaKnown RBP10.99□□□□□ -0.65
NEK3-205ENST00000610828 LINC00869P0C866 280 aa10.99□□□□□ -0.65
NEK3-205ENST00000610828 NPPCP23582 126 aa10.99□□□□□ -0.65
NEK3-205ENST00000610828 OR10J1P30954 320 aa10.99□□□□□ -0.65
NEK3-205ENST00000610828 LGALS7P47929 136 aa10.99□□□□□ -0.65
NEK3-205ENST00000610828 TIMD4Q96H15 378 aa10.99□□□□□ -0.65
NEK3-205ENST00000610828 ACY3Q96HD9 319 aa10.99□□□□□ -0.65
NEK3-205ENST00000610828 SPTBN1Q01082 2364 aaKnown RBP10.99□□□□□ -0.65
NEK3-205ENST00000610828 UNQ6494/PRO21346Q6UXR6 183 aa10.98□□□□□ -0.65
NEK3-205ENST00000610828 C1QL4Q86Z23 238 aa10.98□□□□□ -0.65
NEK3-205ENST00000610828 LINC00469Q8N7U9 141 aa10.98□□□□□ -0.65
NEK3-205ENST00000610828 OR4P4Q8NGL7 312 aa10.98□□□□□ -0.65
NEK3-205ENST00000610828 OR2T6Q8NHC8 308 aa10.98□□□□□ -0.65
NEK3-205ENST00000610828 CTDSP1Q9GZU7 261 aa10.98□□□□□ -0.65
NEK3-205ENST00000610828 PRORYQ9H606 182 aa10.98□□□□□ -0.65
NEK3-205ENST00000610828 PLXNB1O43157 2135 aa10.98□□□□□ -0.65
NEK3-205ENST00000610828 NAV3Q8IVL0 2385 aa10.98□□□□□ -0.65
NEK3-205ENST00000610828 IGHV1-3A0A0C4DH29 117 aa10.98□□□□□ -0.65
NEK3-205ENST00000610828 INS-IGF2F8WCM5 200 aa10.98□□□□□ -0.65
NEK3-205ENST00000610828 FOXH1O75593 365 aa10.98□□□□□ -0.65
NEK3-205ENST00000610828 NDUFB4O95168 129 aa10.98□□□□□ -0.65
NEK3-205ENST00000610828 SFTPCP11686 197 aa10.98□□□□□ -0.65
NEK3-205ENST00000610828 GCHFRP30047 84 aa10.98□□□□□ -0.65
NEK3-205ENST00000610828 RND2P52198 227 aa10.98□□□□□ -0.65
NEK3-205ENST00000610828 GNB1P62873 340 aa10.98□□□□□ -0.65
NEK3-205ENST00000610828 C11orf71Q6IPW1 123 aa10.98□□□□□ -0.65
NEK3-205ENST00000610828 SLC16A13Q7RTY0 426 aa10.98□□□□□ -0.65
NEK3-205ENST00000610828 BEND2Q8NDZ0 799 aa10.98□□□□□ -0.65
NEK3-205ENST00000610828 DERL1Q9BUN8 251 aa10.98□□□□□ -0.65
NEK3-205ENST00000610828 HIVEP3Q5T1R4 2406 aa10.97□□□□□ -0.65
NEK3-205ENST00000610828 RBP4P02753 201 aa10.97□□□□□ -0.65
NEK3-205ENST00000610828 REG1AP05451 166 aa10.97□□□□□ -0.65
NEK3-205ENST00000610828 LIPFP07098 398 aa10.97□□□□□ -0.65
NEK3-205ENST00000610828 CNTFRP26992 372 aa10.97□□□□□ -0.65
NEK3-205ENST00000610828 FABP9Q0Z7S8 132 aa10.97□□□□□ -0.65
NEK3-205ENST00000610828 MIR17HGQ75NE6 70 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms