RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 G3V4G9 280 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 RAB29O14966 203 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 SLC31A2O15432 143 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 DENRO43583 198 aaKnown RBP2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 NDUFA3O95167 84 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 IGHV3-7P01780 117 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 IGHG4P01861 327 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 HLA-DRB1P01911 266 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR5H8P0DN80 308 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 IGHV3-43DP0DP04 118 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 BLVRBP30043 206 aaPredicted RBP2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 FGF9P31371 208 aaPredicted RBP2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 MYCNOSP40205 109 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 MFAP2P55001 183 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 RPL23AP62750 156 aaKnown RBP2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 RPS25P62851 125 aaKnown RBP2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 SLC35B1P78383 322 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 FABP5Q01469 135 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 EGFEM1PQ0D2K5 195 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 KLF5Q13887 457 aaPredicted RBP2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 HES1Q14469 280 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 ARL6IP1Q15041 203 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 SSX1Q16384 188 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 LTC4SQ16873 150 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 ZNF674Q2M3X9 581 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 NSUN5P1Q3KNT7 163 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 C2orf76Q3KRA6 126 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 UBE2UQ5VVX9 321 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR10K2Q6IF99 312 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 IZUMO2Q6UXV1 221 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 Q6ZS49 121 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 C6orf201Q7Z4U5 140 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 SLC35E3Q7Z769 313 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 MOB3BQ86TA1 216 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 STPG2Q8N412 459 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 NPBQ8NG41 125 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR51D1Q8NGF3 324 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR56B1Q8NGI3 324 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR4A16Q8NH70 328 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR1L1Q8NH94 360 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 MYOZ3Q8TDC0 251 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 GTSF1Q8WW33 167 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 PTX4Q96A99 478 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 FAM3DQ96BQ1 224 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 RAB3CQ96E17 227 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 P2RX4Q99571 388 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 RNF5Q99942 180 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 NABP2Q9BQ15 211 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 AGMATQ9BSE5 352 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 NICN1Q9BSH3 213 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 FAAP24Q9BTP7 215 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 GPR61Q9BZJ8 451 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 IFI27L2Q9H2X8 130 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 PLGRKTQ9HBL7 147 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR2S2Q9NQN1 319 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 NECAP2Q9NVZ3 263 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 PLEKHJ1Q9NW61 149 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 NDUFB11Q9NX14 153 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 ABRACLQ9P1F3 81 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 Q9UF83 564 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 RAB22AQ9UL26 194 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 V9GY05 133 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 CMYA5Q8N3K9 4069 aa2.6□□□□□ -1.99
CKS1BP3-201ENST00000600888 PRKDCP78527 4128 aaKnown RBP2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 IGHV3OR16-12A0A075B7B8 117 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 IGHV7-81A0A0B4J1V7 117 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 IGHV3-72A0A0B4J1Y9 119 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 OR5H14A6NHG9 310 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 IFITM5A6NNB3 132 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 NCBP2LA6PVI3 153 aaKnown RBP2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 ZNF736B4DX44 427 aaPredicted RBP2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 PDCD5O14737 125 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 CHEK1O14757 476 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 NBR2O15453 112 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 SOCS1O15524 211 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 TSC22D2O75157 780 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 RBBP9O75884 186 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 ATP6V1G2O95670 118 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 SNRPCP09234 159 aaKnown RBP2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 GIG44P09565 113 aaPredicted RBP2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 HSMCR30P0CW71 290 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 SAA2P0DJI9 122 aaPredicted RBP2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 RAB3BP20337 219 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 ZBTB25P24278 435 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 UCP1P25874 307 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 PSMB8P28062 276 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 SOX6P35712 828 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 PPP1CCP36873 323 aaKnown RBP2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 REG1BP48304 166 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 SERPINB10P48595 397 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 ACTBP60709 375 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 HLA-DRB3P79483 266 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 RUNX1Q01196 453 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 GNMTQ14749 295 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 KIR2DS1Q14954 304 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 RAB11BQ15907 218 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 HAGHQ16775 308 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 C5orf64Q2M2E5 130 aa2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 ZNF660Q6AZW8 331 aaPredicted RBP2.59□□□□□ -1.99
CKS1BP3-201ENST00000600888 C10orf99Q6UWK7 81 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms